RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 RAG2P55895 527 aa11.35□□□□□ -0.59
CHD8-208ENST00000555301 RELBQ01201 579 aa11.35□□□□□ -0.59
CHD8-208ENST00000555301 KRTAP24-1Q3LI83 254 aa11.35□□□□□ -0.59
CHD8-208ENST00000555301 TMEM128Q5BJH2 165 aa11.35□□□□□ -0.59
CHD8-208ENST00000555301 LIN54Q6MZP7 749 aa11.35□□□□□ -0.59
CHD8-208ENST00000555301 Q6ZSV7 163 aa11.35□□□□□ -0.59
CHD8-208ENST00000555301 Q8N2B8 174 aa11.35□□□□□ -0.59
CHD8-208ENST00000555301 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.35□□□□□ -0.59
CHD8-208ENST00000555301 TEX45Q8NA69 505 aa11.35□□□□□ -0.59
CHD8-208ENST00000555301 ADAD2Q8NCV1 583 aaKnown RBP11.35□□□□□ -0.59
CHD8-208ENST00000555301 OR4F5Q8NH21 305 aa11.35□□□□□ -0.59
CHD8-208ENST00000555301 OR2T6Q8NHC8 308 aa11.35□□□□□ -0.59
CHD8-208ENST00000555301 TMEM230Q96A57 120 aa11.35□□□□□ -0.59
CHD8-208ENST00000555301 GALNT14Q96FL9 552 aa11.35□□□□□ -0.59
CHD8-208ENST00000555301 FBXL15Q9H469 300 aa11.35□□□□□ -0.59
CHD8-208ENST00000555301 C16orf95Q9H693 158 aa11.35□□□□□ -0.59
CHD8-208ENST00000555301 PALMDQ9NP74 551 aa11.35□□□□□ -0.59
CHD8-208ENST00000555301 CREBL2O60519 120 aaPredicted RBP11.34□□□□□ -0.59
CHD8-208ENST00000555301 ATG12O94817 140 aa11.34□□□□□ -0.59
CHD8-208ENST00000555301 S1PR2O95136 353 aa11.34□□□□□ -0.59
CHD8-208ENST00000555301 HLA-DRB1P01911 266 aa11.34□□□□□ -0.59
CHD8-208ENST00000555301 TCRBP04435 133 aa11.34□□□□□ -0.59
CHD8-208ENST00000555301 ANXA3P12429 323 aa11.34□□□□□ -0.59
CHD8-208ENST00000555301 UCP1P25874 307 aa11.34□□□□□ -0.59
CHD8-208ENST00000555301 UBE2MP61081 183 aaKnown RBP11.34□□□□□ -0.59
CHD8-208ENST00000555301 ERVK-16P61578 105 aa11.34□□□□□ -0.59
CHD8-208ENST00000555301 DHODHQ02127 395 aa11.34□□□□□ -0.59
CHD8-208ENST00000555301 POU2AF1Q16633 256 aa11.34□□□□□ -0.59
CHD8-208ENST00000555301 ZNF585BQ52M93 769 aa11.34□□□□□ -0.59
CHD8-208ENST00000555301 C9orf152Q5JTZ5 239 aa11.34□□□□□ -0.59
CHD8-208ENST00000555301 SLC25A42Q86VD7 318 aa11.34□□□□□ -0.59
CHD8-208ENST00000555301 PPP1R27Q86WC6 154 aa11.34□□□□□ -0.59
CHD8-208ENST00000555301 ENKURQ8TC29 256 aa11.34□□□□□ -0.59
CHD8-208ENST00000555301 RHOVQ96L33 236 aa11.34□□□□□ -0.59
CHD8-208ENST00000555301 TP53RKQ96S44 253 aa11.34□□□□□ -0.59
CHD8-208ENST00000555301 ZNF702PQ9H963 129 aa11.34□□□□□ -0.59
CHD8-208ENST00000555301 SIGLEC9Q9Y336 463 aa11.34□□□□□ -0.59
CHD8-208ENST00000555301 SETD2Q9BYW2 2564 aaPredicted RBP11.33□□□□□ -0.6
CHD8-208ENST00000555301 JMJD1CQ15652 2540 aa11.33□□□□□ -0.6
CHD8-208ENST00000555301 A0A1B0GUS0 222 aa11.33□□□□□ -0.6
CHD8-208ENST00000555301 ARPC1BO15143 372 aaKnown RBP11.33□□□□□ -0.6
CHD8-208ENST00000555301 KCNAB3O43448 404 aa11.33□□□□□ -0.6
CHD8-208ENST00000555301 OR2A4O95047 310 aa11.33□□□□□ -0.6
CHD8-208ENST00000555301 CRYGBP07316 175 aa11.33□□□□□ -0.6
CHD8-208ENST00000555301 OR5AC1P0C628 307 aa11.33□□□□□ -0.6
CHD8-208ENST00000555301 SAA1P0DJI8 122 aaPredicted RBP11.33□□□□□ -0.6
CHD8-208ENST00000555301 FOXL1Q12952 345 aa11.33□□□□□ -0.6
CHD8-208ENST00000555301 TRIM16LQ309B1 348 aa11.33□□□□□ -0.6
CHD8-208ENST00000555301 SP6Q3SY56 376 aa11.33□□□□□ -0.6
CHD8-208ENST00000555301 ARSJQ5FYB0 599 aaPredicted RBP11.33□□□□□ -0.6
CHD8-208ENST00000555301 DMBX1Q8NFW5 382 aa11.33□□□□□ -0.6
CHD8-208ENST00000555301 R3HDM4Q96D70 268 aa11.33□□□□□ -0.6
CHD8-208ENST00000555301 OR2A7Q96R45 310 aa11.33□□□□□ -0.6
CHD8-208ENST00000555301 TMEM222Q9H0R3 208 aa11.33□□□□□ -0.6
CHD8-208ENST00000555301 C20orf85Q9H1P6 137 aa11.33□□□□□ -0.6
CHD8-208ENST00000555301 BEX1Q9HBH7 125 aa11.33□□□□□ -0.6
CHD8-208ENST00000555301 PIGBOS1A0A0B4J2F0 54 aa11.32□□□□□ -0.6
CHD8-208ENST00000555301 TMEM89A2RUT3 159 aa11.32□□□□□ -0.6
CHD8-208ENST00000555301 SH2D7A6NKC9 451 aaPredicted RBP11.32□□□□□ -0.6
CHD8-208ENST00000555301 MARCH11A6NNE9 402 aa11.32□□□□□ -0.6
CHD8-208ENST00000555301 IGHG2P01859 326 aa11.32□□□□□ -0.6
CHD8-208ENST00000555301 SRPXP78539 464 aa11.32□□□□□ -0.6
CHD8-208ENST00000555301 ZNF562Q6V9R5 426 aa11.32□□□□□ -0.6
CHD8-208ENST00000555301 SSX9Q7RTT3 188 aa11.32□□□□□ -0.6
CHD8-208ENST00000555301 SLC35E3Q7Z769 313 aa11.32□□□□□ -0.6
CHD8-208ENST00000555301 VKORC1L1Q8N0U8 176 aa11.32□□□□□ -0.6
CHD8-208ENST00000555301 PUSL1Q8N0Z8 303 aaKnown RBP11.32□□□□□ -0.6
CHD8-208ENST00000555301 CADM3Q8N126 398 aa11.32□□□□□ -0.6
CHD8-208ENST00000555301 DUSP18Q8NEJ0 188 aa11.32□□□□□ -0.6
CHD8-208ENST00000555301 OR4A5Q8NH83 315 aa11.32□□□□□ -0.6
CHD8-208ENST00000555301 LINC01006Q8NI28 216 aa11.32□□□□□ -0.6
CHD8-208ENST00000555301 GLYATL2Q8WU03 294 aa11.32□□□□□ -0.6
CHD8-208ENST00000555301 C19orf24Q9BVV8 132 aa11.32□□□□□ -0.6
CHD8-208ENST00000555301 BET1LQ9NYM9 111 aa11.32□□□□□ -0.6
CHD8-208ENST00000555301 FLVCR2Q9UPI3 526 aa11.32□□□□□ -0.6
CHD8-208ENST00000555301 NUBP2Q9Y5Y2 271 aa11.32□□□□□ -0.6
CHD8-208ENST00000555301 CLPSL1A2RUU4 121 aa11.31□□□□□ -0.6
CHD8-208ENST00000555301 KBTBD11O94819 623 aa11.31□□□□□ -0.6
CHD8-208ENST00000555301 CDS2O95674 445 aa11.31□□□□□ -0.6
CHD8-208ENST00000555301 CA2P00918 260 aa11.31□□□□□ -0.6
CHD8-208ENST00000555301 KRASP01116 189 aa11.31□□□□□ -0.6
CHD8-208ENST00000555301 VAMP1P23763 118 aa11.31□□□□□ -0.6
CHD8-208ENST00000555301 VDAC2P45880 294 aaPredicted RBP11.31□□□□□ -0.6
CHD8-208ENST00000555301 SUPT4H1P63272 117 aaKnown RBP11.31□□□□□ -0.6
CHD8-208ENST00000555301 DCTN2Q13561 401 aaKnown RBP11.31□□□□□ -0.6
CHD8-208ENST00000555301 PRSS8Q16651 343 aa11.31□□□□□ -0.6
CHD8-208ENST00000555301 OR4A47Q6IF82 309 aa11.31□□□□□ -0.6
CHD8-208ENST00000555301 Q6ZS46 218 aa11.31□□□□□ -0.6
CHD8-208ENST00000555301 NRARPQ7Z6K4 114 aa11.31□□□□□ -0.6
CHD8-208ENST00000555301 ZNF695Q8IW36 515 aa11.31□□□□□ -0.6
CHD8-208ENST00000555301 FOXRED2Q8IWF2 684 aa11.31□□□□□ -0.6
CHD8-208ENST00000555301 MMD2Q8IY49 270 aa11.31□□□□□ -0.6
CHD8-208ENST00000555301 TMEM167AQ8TBQ9 72 aa11.31□□□□□ -0.6
CHD8-208ENST00000555301 TAF15Q92804 592 aaKnown RBP eCLIP11.31□□□□□ -0.6
CHD8-208ENST00000555301 TMEM56Q96MV1 263 aa11.31□□□□□ -0.6
CHD8-208ENST00000555301 CLCC1Q96S66 551 aa11.31□□□□□ -0.6
CHD8-208ENST00000555301 ALX4Q9H161 411 aaPredicted RBP11.31□□□□□ -0.6
CHD8-208ENST00000555301 TPSG1Q9NRR2 321 aa11.31□□□□□ -0.6
CHD8-208ENST00000555301 TMEM140Q9NV12 185 aa11.31□□□□□ -0.6
CHD8-208ENST00000555301 NUDT15Q9NV35 164 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms