RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 NPPCP23582 126 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 CRYBB2P43320 205 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 TDGF1P3P51864 188 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 PAPPA-AS1Q5QFB9 102 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 MIOXQ9UGB7 285 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 ERASQ7Z444 233 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 SCGB3A1Q96QR1 104 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 TMEM106BQ9NUM4 274 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 PATJQ8NI35 1801 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 DDX60LQ5H9U9 1706 aaKnown RBP5.95□□□□□ -1.46
SYNE2-216ENST00000555002 IGLV3-27P01718 113 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 BCL2P10415 239 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 IGFBP6P24592 240 aaPredicted RBP5.95□□□□□ -1.46
SYNE2-216ENST00000555002 ASIPP42127 132 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 MVDP53602 400 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 OR4X2Q8NGF9 303 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 OR10AG1Q8NH19 301 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 GREB1Q4ZG55 1949 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 PGPA6NDG6 321 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 FAM3BP58499 235 aaPredicted RBP5.95□□□□□ -1.46
SYNE2-216ENST00000555002 SIGLEC14Q08ET2 396 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 CBLN3Q6UW01 205 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 C12orf54Q6X4T0 127 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 OR2K2Q8NGT1 345 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 RAB33BQ9H082 229 aa5.95□□□□□ -1.46
SYNE2-216ENST00000555002 NAV3Q8IVL0 2385 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 ASPDHA6ND91 283 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 LINC00615Q96LM1 132 aaPredicted RBP5.94□□□□□ -1.46
SYNE2-216ENST00000555002 MRPL20Q9BYC9 149 aaKnown RBP5.94□□□□□ -1.46
SYNE2-216ENST00000555002 RGPD3A6NKT7 1758 aaPredicted RBP5.94□□□□□ -1.46
SYNE2-216ENST00000555002 F8WEM9 126 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 HPRT1P00492 218 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 IGHV3-11P01762 117 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 PRB3Q04118 309 aaPredicted RBP5.94□□□□□ -1.46
SYNE2-216ENST00000555002 RSPO4Q2I0M5 234 aaPredicted RBP5.94□□□□□ -1.46
SYNE2-216ENST00000555002 Q5PR19 223 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 PRSS42Q7Z5A4 293 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 ST6GALNAC6Q969X2 333 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 NKX2-2O95096 273 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 SRIP30626 198 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 TCF24Q7RTU0 167 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 MRPL18Q9H0U6 180 aaKnown RBP5.94□□□□□ -1.46
SYNE2-216ENST00000555002 ALX4Q9H161 411 aaPredicted RBP5.94□□□□□ -1.46
SYNE2-216ENST00000555002 RUNX1Q01196 453 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 PLPPR5Q32ZL2 321 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 S100A7L2Q5SY68 101 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 C11orf44Q8N8P7 122 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 SLC25A34Q6PIV7 304 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 ZBTB34Q8NCN2 500 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 IDI2-AS1Q9NZ38 188 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 ZIC3O60481 467 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 CFDP00746 253 aaPredicted RBP5.94□□□□□ -1.46
SYNE2-216ENST00000555002 CKS1BP61024 79 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 KIAA1644Q3SXP7 199 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 MMD2Q8IY49 270 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 PLXNB1O43157 2135 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 NCKAP5O14513 1909 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 GCSAMQ8N6F7 178 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 CST9LQ9H4G1 147 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 TRGV4A0A0C4DH28 118 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 GTSCR1Q86UQ5 136 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 SF3B5Q9BWJ5 86 aaKnown RBP5.94□□□□□ -1.46
SYNE2-216ENST00000555002 MOSPD3O75425 235 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 TYMSP04818 313 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 ATP1A1-AS1Q5TC04 95 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 STHQ8IWL8 128 aa5.94□□□□□ -1.46
SYNE2-216ENST00000555002 PEX7O00628 323 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 FOLR2P14207 255 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 SFTA2Q6UW10 78 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 FAM74A7A6NL05 159 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 UPK3AO75631 287 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 EIF3GO75821 320 aaKnown RBP eCLIP5.93□□□□□ -1.46
SYNE2-216ENST00000555002 ASAH2BP0C7U1 165 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 MUC1P15941 1255 aaPredicted RBP5.93□□□□□ -1.46
SYNE2-216ENST00000555002 TMEM45BQ96B21 275 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 A0A0U1RQV5 110 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 HLA-DRB1P01911 266 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 GFI1BQ5VTD9 330 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 IL20Q9NYY1 176 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 C7orf77A4D0Y5 90 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 NPIPB4C9JG80 1138 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 SNAI2O43623 268 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 TTC9CQ8N5M4 171 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 OR11H12B2RN74 326 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 OR11H1Q8NG94 326 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 OR11H2Q8NH07 326 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 CALYQ9NYX4 217 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 C7orf66A4D0T2 115 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 SRD5A1P18405 259 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 PAX2Q02962 417 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 MESTQ5EB52 335 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 ARFGEF1Q9Y6D6 1849 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 TRAV30A0A087WSZ9 112 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 F12P00748 615 aaPredicted RBP5.93□□□□□ -1.46
SYNE2-216ENST00000555002 OR10J3Q5JRS4 329 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 FAM168AQ92567 244 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 MARS2Q96GW9 593 aaKnown RBP5.93□□□□□ -1.46
SYNE2-216ENST00000555002 ST6GAL2Q96JF0 529 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 UQCR10Q9UDW1 63 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 A0A1B0GTL3 188 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms