RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 SFT2D2O95562 160 aa8.13□□□□□ -1.11
SYNE2-215ENST00000554997 IGLV2-23P01705 113 aa8.13□□□□□ -1.11
SYNE2-215ENST00000554997 IL5P05113 134 aa8.13□□□□□ -1.11
SYNE2-215ENST00000554997 RNASE1P07998 156 aaKnown RBP8.13□□□□□ -1.11
SYNE2-215ENST00000554997 OR5AC1P0C628 307 aa8.13□□□□□ -1.11
SYNE2-215ENST00000554997 ANXA3P12429 323 aa8.13□□□□□ -1.11
SYNE2-215ENST00000554997 NQO2P16083 231 aa8.13□□□□□ -1.11
SYNE2-215ENST00000554997 ANXA7P20073 488 aaKnown RBP8.13□□□□□ -1.11
SYNE2-215ENST00000554997 UBA52P62987 128 aaKnown RBP8.13□□□□□ -1.11
SYNE2-215ENST00000554997 TMEM187Q14656 261 aa8.13□□□□□ -1.11
SYNE2-215ENST00000554997 PSG5Q15238 335 aa8.13□□□□□ -1.11
SYNE2-215ENST00000554997 TMEM219Q86XT9 240 aa8.13□□□□□ -1.11
SYNE2-215ENST00000554997 TEX45Q8NA69 505 aa8.13□□□□□ -1.11
SYNE2-215ENST00000554997 SLC25A33Q9BSK2 321 aa8.13□□□□□ -1.11
SYNE2-215ENST00000554997 COMMD9Q9P000 198 aa8.13□□□□□ -1.11
SYNE2-215ENST00000554997 PIGBOS1A0A0B4J2F0 54 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 TRIM77I1YAP6 450 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 RRHO14718 337 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 NBR2O15453 112 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 FGF16O43320 207 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 CHST1O43916 411 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 GPR137BO60478 399 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 ATG12O94817 140 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 SPDEFO95238 335 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 KRASP01116 189 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 IGKV1-39P01597 117 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 IGKV1D-39P04432 117 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 AMY1AP04745 511 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 CRYGBP07316 175 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 IL6RP08887 468 aaPredicted RBP8.12□□□□□ -1.11
SYNE2-215ENST00000554997 SPNP16150 400 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 VAMP1P23763 118 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 CNTFRP26992 372 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 RIPPLY3P57055 190 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 UBE2KP61086 200 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 RPL15P61313 204 aaKnown RBP8.12□□□□□ -1.11
SYNE2-215ENST00000554997 PPP1R1AQ13522 171 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 OXA1LQ15070 435 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 MMDQ15546 238 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 POU2AF1Q16633 256 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 C4orf46Q504U0 113 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 LIN54Q6MZP7 749 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 SELENOHQ8IZQ5 122 aaKnown RBP8.12□□□□□ -1.11
SYNE2-215ENST00000554997 FAM71E2Q8N5Q1 922 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 LRTM2Q8N967 370 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 Q8N9W7 124 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 VSTM2AQ8TAG5 236 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 IL22RA2Q969J5 263 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 RHOVQ96L33 236 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 HARBI1Q96MB7 349 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 DUX5Q96PT3 197 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 RASL11BQ9BPW5 248 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 KIAA1456Q9P272 454 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 MOB4Q9Y3A3 225 aa8.12□□□□□ -1.11
SYNE2-215ENST00000554997 FAM181BA6NEQ2 426 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 OR2A4O95047 310 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 S1PR2O95136 353 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 DUS4LO95620 317 aaKnown RBP8.11□□□□□ -1.11
SYNE2-215ENST00000554997 DHFRP00374 187 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 HLA-AP01891 365 aaKnown RBP8.11□□□□□ -1.11
SYNE2-215ENST00000554997 RAB25P57735 213 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 BLCAPP62952 87 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 SRPXP78539 464 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 DHRS2Q13268 280 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 C5orf64Q2M2E5 130 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 TRIM16LQ309B1 348 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 VMA21Q3ZAQ7 101 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 LYG2Q86SG7 212 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 ZNF695Q8IW36 515 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 VKORC1L1Q8N0U8 176 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 PUSL1Q8N0Z8 303 aaKnown RBP8.11□□□□□ -1.11
SYNE2-215ENST00000554997 LGI3Q8N145 548 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 C5orf56Q8N8D9 126 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 OR4A5Q8NH83 315 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 R3HDM4Q96D70 268 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 SEC22AQ96IW7 307 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 OR2A7Q96R45 310 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 FBXL15Q9H469 300 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 BEX1Q9HBH7 125 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 METTL1Q9UBP6 276 aaKnown RBP8.11□□□□□ -1.11
SYNE2-215ENST00000554997 SIGLEC9Q9Y336 463 aa8.11□□□□□ -1.11
SYNE2-215ENST00000554997 A0A0B4J2A0 478 aa8.1□□□□□ -1.11
SYNE2-215ENST00000554997 MARCH11A6NNE9 402 aa8.1□□□□□ -1.11
SYNE2-215ENST00000554997 FCN1O00602 326 aa8.1□□□□□ -1.11
SYNE2-215ENST00000554997 SLC25A17O43808 307 aa8.1□□□□□ -1.11
SYNE2-215ENST00000554997 PRAF2O60831 178 aa8.1□□□□□ -1.11
SYNE2-215ENST00000554997 CRYBA1P05813 215 aa8.1□□□□□ -1.11
SYNE2-215ENST00000554997 FGF2P09038 288 aa8.1□□□□□ -1.11
SYNE2-215ENST00000554997 SAA1P0DJI8 122 aaPredicted RBP8.1□□□□□ -1.11
SYNE2-215ENST00000554997 G6PCP35575 357 aa8.1□□□□□ -1.11
SYNE2-215ENST00000554997 ANKRD55Q3KP44 614 aa8.1□□□□□ -1.11
SYNE2-215ENST00000554997 TMEM268Q5VZI3 342 aa8.1□□□□□ -1.11
SYNE2-215ENST00000554997 OR4A47Q6IF82 309 aa8.1□□□□□ -1.11
SYNE2-215ENST00000554997 ZNF562Q6V9R5 426 aa8.1□□□□□ -1.11
SYNE2-215ENST00000554997 PPP1R27Q86WC6 154 aa8.1□□□□□ -1.11
SYNE2-215ENST00000554997 MINDY2Q8NBR6 621 aa8.1□□□□□ -1.11
SYNE2-215ENST00000554997 DMBX1Q8NFW5 382 aa8.1□□□□□ -1.11
SYNE2-215ENST00000554997 LHFPL5Q8TAF8 219 aa8.1□□□□□ -1.11
SYNE2-215ENST00000554997 TMEM167AQ8TBQ9 72 aa8.1□□□□□ -1.11
SYNE2-215ENST00000554997 ZNF431Q8TF32 576 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms