RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 LYPD6BQ8NI32 183 aa7.27□□□□□ -1.24
TDP1-210ENST00000554976 SMIM8Q96KF7 97 aa7.27□□□□□ -1.24
TDP1-210ENST00000554976 TSNAXQ99598 290 aaKnown RBP7.27□□□□□ -1.24
TDP1-210ENST00000554976 MAGT1Q9H0U3 335 aa7.27□□□□□ -1.24
TDP1-210ENST00000554976 GAL3ST2Q9H3Q3 398 aa7.27□□□□□ -1.24
TDP1-210ENST00000554976 RBM7Q9Y580 266 aaKnown RBP7.27□□□□□ -1.24
TDP1-210ENST00000554976 WSB1Q9Y6I7 421 aa7.27□□□□□ -1.24
TDP1-210ENST00000554976 A0A1W2PPE3 182 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 TEX46H3BTG2 121 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 NDUFB3O43676 98 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 HPRT1P00492 218 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 OR9G9P0C7N8 305 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 CT45A6P0DMU7 189 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 CT45A5P0DMU8 189 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 CT45A7P0DMV0 189 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 POU2AF1Q16633 256 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 FAM71F2Q6NXP2 309 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 CD300LFQ8TDQ1 290 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 IGSF10Q6WRI0 2623 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 LRBAP50851 2863 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 MARCH11A6NNE9 402 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 OVOL3O00110 214 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 NXPH3O95157 252 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 IGHV3-7P01780 117 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 ZNF16P17020 682 aaPredicted RBP7.27□□□□□ -1.25
TDP1-210ENST00000554976 EPHA1P21709 976 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 KIR2DS2P43631 304 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 BAXQ07812 192 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 LRRC10Q5BKY1 277 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 NEU4Q8WWR8 484 aaPredicted RBP7.27□□□□□ -1.25
TDP1-210ENST00000554976 TMPRSS5Q9H3S3 457 aa7.27□□□□□ -1.25
TDP1-210ENST00000554976 PCNX1Q96RV3 2341 aa7.26□□□□□ -1.25
TDP1-210ENST00000554976 PPIHO43447 177 aaKnown RBP7.26□□□□□ -1.25
TDP1-210ENST00000554976 SYNGR2O43760 224 aa7.26□□□□□ -1.25
TDP1-210ENST00000554976 JTBO76095 146 aa7.26□□□□□ -1.25
TDP1-210ENST00000554976 LY86O95711 162 aa7.26□□□□□ -1.25
TDP1-210ENST00000554976 TNFRSF9Q07011 255 aa7.26□□□□□ -1.25
TDP1-210ENST00000554976 TMEM14EPQ6UXP3 125 aa7.26□□□□□ -1.25
TDP1-210ENST00000554976 RAB40CQ96S21 281 aa7.26□□□□□ -1.25
TDP1-210ENST00000554976 RBKSQ9H477 322 aa7.26□□□□□ -1.25
TDP1-210ENST00000554976 LAMP3Q9UQV4 416 aa7.26□□□□□ -1.25
TDP1-210ENST00000554976 M0R1X1 148 aa7.26□□□□□ -1.25
TDP1-210ENST00000554976 RBP4P02753 201 aa7.26□□□□□ -1.25
TDP1-210ENST00000554976 IGHV1-8P0DP01 117 aa7.26□□□□□ -1.25
TDP1-210ENST00000554976 THBS3P49746 956 aa7.26□□□□□ -1.25
TDP1-210ENST00000554976 SULT1A2P50226 295 aa7.26□□□□□ -1.25
TDP1-210ENST00000554976 RELBQ01201 579 aa7.26□□□□□ -1.25
TDP1-210ENST00000554976 ARL16Q0P5N6 197 aa7.26□□□□□ -1.25
TDP1-210ENST00000554976 C10orf91Q5T1B1 145 aa7.26□□□□□ -1.25
TDP1-210ENST00000554976 R3HDM4Q96D70 268 aa7.26□□□□□ -1.25
TDP1-210ENST00000554976 UNKLQ9H9P5 680 aaKnown RBP7.26□□□□□ -1.25
TDP1-210ENST00000554976 LY6HO94772 140 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 GOSR1O95249 250 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 ARG1P05089 322 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 MDKP21741 143 aaPredicted RBP7.25□□□□□ -1.25
TDP1-210ENST00000554976 UBE2KP61086 200 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 PARD6GQ9BYG4 376 aaPredicted RBP7.25□□□□□ -1.25
TDP1-210ENST00000554976 GPR61Q9BZJ8 451 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 RAB1BQ9H0U4 201 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 CARHSP1Q9Y2V2 147 aaKnown RBP7.25□□□□□ -1.25
TDP1-210ENST00000554976 USP24Q9UPU5 2620 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 CFAP46Q8IYW2 2715 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 C1orf196B1AJZ1 125 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 MBP02144 154 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 SEC11BP0C7V7 166 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 GNG10P50151 68 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 DYNLT3P51808 116 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 RAB2AP61019 212 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 OR52E5Q8NH55 327 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 TMED6Q8WW62 240 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 OR4C12Q96R67 309 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 GGACTQ9BVM4 153 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 YLPM1P49750 1951 aaKnown RBP7.25□□□□□ -1.25
TDP1-210ENST00000554976 TMEM218A2RU14 115 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 J3QR06 171 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 FCGR3BO75015 233 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 KRASP01116 189 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 IGHV2-5P01817 119 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 SULT1A1P50225 295 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 AKR1C2P52895 323 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 SRSF1Q07955 248 aaKnown RBP eCLIP7.25□□□□□ -1.25
TDP1-210ENST00000554976 FABP9Q0Z7S8 132 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 MRGPRG-AS1Q2M3A8 158 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 DNLZQ5SXM8 178 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 RBMXL1Q96E39 390 aaKnown RBP7.25□□□□□ -1.25
TDP1-210ENST00000554976 SMIM3Q9BZL3 60 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 SLC25A31Q9H0C2 315 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 SH3BGRL3Q9H299 93 aa7.25□□□□□ -1.25
TDP1-210ENST00000554976 RALYQ9UKM9 306 aaKnown RBP7.25□□□□□ -1.25
TDP1-210ENST00000554976 VPS13CQ709C8 3753 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 HIVEP3Q5T1R4 2406 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 TRAV3A0A0B4J244 114 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 PRSS46E5RG02 174 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 IGLV1-47P01700 117 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 DIAPH2-AS1Q14236 149 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 VWC2Q2TAL6 325 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 BTNL8Q6UX41 500 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 ZNF429Q86V71 674 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 Q8N7P7 452 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 OR5AN1Q8NGI8 311 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms