RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 ARHGAP11BQ3KRB8 267 aa0.75□□□□□ -2.29
SCFD1-214ENST00000554819 C9orf64Q5T6V5 341 aa0.75□□□□□ -2.29
SCFD1-214ENST00000554819 SPERTQ8NA61 448 aa0.75□□□□□ -2.29
SCFD1-214ENST00000554819 LFNGQ8NES3 379 aa0.75□□□□□ -2.29
SCFD1-214ENST00000554819 IMMP2LQ96T52 175 aa0.75□□□□□ -2.29
SCFD1-214ENST00000554819 ZNHIT6Q9NWK9 470 aaKnown RBP0.75□□□□□ -2.29
SCFD1-214ENST00000554819 MYH11P35749 1972 aa0.75□□□□□ -2.29
SCFD1-214ENST00000554819 CHD5Q8TDI0 1954 aa0.75□□□□□ -2.29
SCFD1-214ENST00000554819 DLG5Q8TDM6 1919 aa0.75□□□□□ -2.29
SCFD1-214ENST00000554819 SIPA1L1O43166 1804 aa0.75□□□□□ -2.29
SCFD1-214ENST00000554819 MYOFQ9NZM1 2061 aa0.74□□□□□ -2.29
SCFD1-214ENST00000554819 ABCC12Q96J65 1359 aa0.74□□□□□ -2.29
SCFD1-214ENST00000554819 CPAMD8Q8IZJ3 1885 aa0.74□□□□□ -2.29
SCFD1-214ENST00000554819 TRAV7A0A075B6U4 112 aa0.74□□□□□ -2.29
SCFD1-214ENST00000554819 A0A0D9SEW6 157 aa0.74□□□□□ -2.29
SCFD1-214ENST00000554819 TEX50A0A1B0GTY4 177 aa0.74□□□□□ -2.29
SCFD1-214ENST00000554819 C5orf49A4QMS7 147 aa0.74□□□□□ -2.29
SCFD1-214ENST00000554819 K7ERQ8 282 aa0.74□□□□□ -2.29
SCFD1-214ENST00000554819 ORC5O43913 435 aa0.74□□□□□ -2.29
SCFD1-214ENST00000554819 ATP6V1G2O95670 118 aa0.74□□□□□ -2.29
SCFD1-214ENST00000554819 HLA-DQB2P05538 268 aa0.74□□□□□ -2.29
SCFD1-214ENST00000554819 CTAG1AP78358 180 aa0.74□□□□□ -2.29
SCFD1-214ENST00000554819 ANGPT1Q15389 498 aa0.74□□□□□ -2.29
SCFD1-214ENST00000554819 C4orf26Q17RF5 130 aa0.74□□□□□ -2.29
SCFD1-214ENST00000554819 PACRGLQ8N7B6 248 aa0.74□□□□□ -2.29
SCFD1-214ENST00000554819 OR5L1Q8NGL2 311 aa0.74□□□□□ -2.29
SCFD1-214ENST00000554819 ODF3Q96PU9 254 aa0.74□□□□□ -2.29
SCFD1-214ENST00000554819 TMEM109Q9BVC6 243 aa0.74□□□□□ -2.29
SCFD1-214ENST00000554819 RBM7Q9Y580 266 aaKnown RBP0.74□□□□□ -2.29
SCFD1-214ENST00000554819 SMARCA4P51532 1647 aa0.74□□□□□ -2.29
SCFD1-214ENST00000554819 FTCDNL1E5RQL4 147 aa0.73□□□□□ -2.29
SCFD1-214ENST00000554819 AZIN1O14977 448 aa0.73□□□□□ -2.29
SCFD1-214ENST00000554819 TOX3O15405 576 aaPredicted RBP0.73□□□□□ -2.29
SCFD1-214ENST00000554819 ATP8B1O43520 1251 aa0.73□□□□□ -2.29
SCFD1-214ENST00000554819 PRB4P10163 310 aaPredicted RBP0.73□□□□□ -2.29
SCFD1-214ENST00000554819 SLCO1A2P46721 670 aa0.73□□□□□ -2.29
SCFD1-214ENST00000554819 RPL28P46779 137 aaKnown RBP0.73□□□□□ -2.29
SCFD1-214ENST00000554819 HLA-DRB3P79483 266 aa0.73□□□□□ -2.29
SCFD1-214ENST00000554819 EMX1Q04741 257 aaPredicted RBP0.73□□□□□ -2.29
SCFD1-214ENST00000554819 GPHB5Q86YW7 130 aa0.73□□□□□ -2.29
SCFD1-214ENST00000554819 TIPINQ9BVW5 301 aa0.73□□□□□ -2.29
SCFD1-214ENST00000554819 NSRP1Q9H0G5 558 aaKnown RBP0.73□□□□□ -2.29
SCFD1-214ENST00000554819 CFAP45Q9UL16 551 aa0.73□□□□□ -2.29
SCFD1-214ENST00000554819 TP53TG1Q9Y2A0 90 aa0.73□□□□□ -2.29
SCFD1-214ENST00000554819 FBN2P35556 2912 aa0.73□□□□□ -2.29
SCFD1-214ENST00000554819 SCAF11Q99590 1463 aaKnown RBP0.73□□□□□ -2.29
SCFD1-214ENST00000554819 NAV1Q8NEY1 1877 aa0.72□□□□□ -2.29
SCFD1-214ENST00000554819 IGKV1-9A0A0C4DH69 117 aa0.72□□□□□ -2.29
SCFD1-214ENST00000554819 MEIS3P1A6NDR6 274 aa0.72□□□□□ -2.29
SCFD1-214ENST00000554819 H3BT86 120 aa0.72□□□□□ -2.29
SCFD1-214ENST00000554819 SCN2BO60939 215 aa0.72□□□□□ -2.29
SCFD1-214ENST00000554819 ORM1P02763 201 aa0.72□□□□□ -2.29
SCFD1-214ENST00000554819 CXCL2P19875 107 aa0.72□□□□□ -2.29
SCFD1-214ENST00000554819 CXCL3P19876 107 aa0.72□□□□□ -2.29
SCFD1-214ENST00000554819 RAB14P61106 215 aa0.72□□□□□ -2.29
SCFD1-214ENST00000554819 RPS24P62847 133 aaKnown RBP0.72□□□□□ -2.29
SCFD1-214ENST00000554819 RASSF6Q6ZTQ3 369 aa0.72□□□□□ -2.29
SCFD1-214ENST00000554819 SPATA24Q86W54 205 aa0.72□□□□□ -2.29
SCFD1-214ENST00000554819 Q8N2B8 174 aa0.72□□□□□ -2.29
SCFD1-214ENST00000554819 SLC37A2Q8TED4 501 aa0.72□□□□□ -2.29
SCFD1-214ENST00000554819 RAB2BQ8WUD1 216 aa0.72□□□□□ -2.29
SCFD1-214ENST00000554819 ANKRD36BP1Q96IX9 119 aa0.72□□□□□ -2.29
SCFD1-214ENST00000554819 ZNF514Q96K75 400 aaPredicted RBP0.72□□□□□ -2.29
SCFD1-214ENST00000554819 CHST6Q9GZX3 395 aa0.72□□□□□ -2.29
SCFD1-214ENST00000554819 XAGE1AQ9HD64 81 aa0.72□□□□□ -2.29
SCFD1-214ENST00000554819 TREM1Q9NP99 234 aa0.72□□□□□ -2.29
SCFD1-214ENST00000554819 TENM3Q9P273 2699 aa0.72□□□□□ -2.29
SCFD1-214ENST00000554819 AHNAKQ09666 5890 aaKnown RBP0.72□□□□□ -2.29
SCFD1-214ENST00000554819 MUC5BQ9HC84 5762 aaPredicted RBP0.72□□□□□ -2.29
SCFD1-214ENST00000554819 TECTAO75443 2155 aa0.72□□□□□ -2.29
SCFD1-214ENST00000554819 POLEQ07864 2286 aa0.71□□□□□ -2.3
SCFD1-214ENST00000554819 TMEM213A2RRL7 107 aa0.71□□□□□ -2.3
SCFD1-214ENST00000554819 OR51F1A6NGY5 319 aa0.71□□□□□ -2.3
SCFD1-214ENST00000554819 ADAP1O75689 374 aa0.71□□□□□ -2.3
SCFD1-214ENST00000554819 IL6P05231 212 aa0.71□□□□□ -2.3
SCFD1-214ENST00000554819 RD3LP0DJH9 198 aa0.71□□□□□ -2.3
SCFD1-214ENST00000554819 CD40LGP29965 261 aa0.71□□□□□ -2.3
SCFD1-214ENST00000554819 HADHBP55084 474 aaKnown RBP0.71□□□□□ -2.3
SCFD1-214ENST00000554819 ACSM3Q53FZ2 586 aa0.71□□□□□ -2.3
SCFD1-214ENST00000554819 FAM173BQ6P4H8 233 aa0.71□□□□□ -2.3
SCFD1-214ENST00000554819 BOD1L2Q8IYS8 172 aa0.71□□□□□ -2.3
SCFD1-214ENST00000554819 RPP25LQ8N5L8 163 aaKnown RBP0.71□□□□□ -2.3
SCFD1-214ENST00000554819 CCL13Q99616 98 aa0.71□□□□□ -2.3
SCFD1-214ENST00000554819 SLC22A4Q9H015 551 aa0.71□□□□□ -2.3
SCFD1-214ENST00000554819 HES4Q9HCC6 221 aa0.71□□□□□ -2.3
SCFD1-214ENST00000554819 PTPRSQ13332 1948 aa0.71□□□□□ -2.3
SCFD1-214ENST00000554819 BRWD1Q9NSI6 2320 aa0.7□□□□□ -2.3
SCFD1-214ENST00000554819 TMED7-TICAM2A0A0A6YYA0 188 aa0.7□□□□□ -2.3
SCFD1-214ENST00000554819 SMLR1H3BR10 107 aa0.7□□□□□ -2.3
SCFD1-214ENST00000554819 HCRTO43612 131 aa0.7□□□□□ -2.3
SCFD1-214ENST00000554819 PPBPP02775 128 aa0.7□□□□□ -2.3
SCFD1-214ENST00000554819 MSMBP08118 114 aa0.7□□□□□ -2.3
SCFD1-214ENST00000554819 TRGC1P0CF51 173 aa0.7□□□□□ -2.3
SCFD1-214ENST00000554819 PET100P0DJ07 73 aa0.7□□□□□ -2.3
SCFD1-214ENST00000554819 DEFA4P12838 97 aa0.7□□□□□ -2.3
SCFD1-214ENST00000554819 HAAOP46952 286 aa0.7□□□□□ -2.3
SCFD1-214ENST00000554819 REG1BP48304 166 aa0.7□□□□□ -2.3
SCFD1-214ENST00000554819 DYNAPQ8N1N2 210 aa0.7□□□□□ -2.3
SCFD1-214ENST00000554819 ASB13Q8WXK3 278 aa0.7□□□□□ -2.3
SCFD1-214ENST00000554819 CD300AQ9UGN4 299 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms