RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 RPL23AP62750 156 aaKnown RBP2.8□□□□□ -1.96
SEC23A-207ENST00000554615 MADCAM1Q13477 382 aa2.8□□□□□ -1.96
SEC23A-207ENST00000554615 WIPI1Q5MNZ9 446 aaPredicted RBP2.8□□□□□ -1.96
SEC23A-207ENST00000554615 C11orf71Q6IPW1 123 aa2.8□□□□□ -1.96
SEC23A-207ENST00000554615 ZNF841Q6ZN19 808 aa2.8□□□□□ -1.96
SEC23A-207ENST00000554615 TMEM182Q6ZP80 229 aaPredicted RBP2.8□□□□□ -1.96
SEC23A-207ENST00000554615 KLF14Q8TD94 323 aaPredicted RBP2.8□□□□□ -1.96
SEC23A-207ENST00000554615 FAM19A4Q96LR4 140 aa2.8□□□□□ -1.96
SEC23A-207ENST00000554615 SPACA5Q96QH8 159 aa2.8□□□□□ -1.96
SEC23A-207ENST00000554615 RNF2Q99496 336 aa2.8□□□□□ -1.96
SEC23A-207ENST00000554615 NDUFAF3Q9BU61 184 aa2.8□□□□□ -1.96
SEC23A-207ENST00000554615 TNFRSF19Q9NS68 423 aa2.8□□□□□ -1.96
SEC23A-207ENST00000554615 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.8□□□□□ -1.96
SEC23A-207ENST00000554615 MIOXQ9UGB7 285 aa2.8□□□□□ -1.96
SEC23A-207ENST00000554615 INSIG2Q9Y5U4 225 aa2.8□□□□□ -1.96
SEC23A-207ENST00000554615 SOX21Q9Y651 276 aaPredicted RBP2.8□□□□□ -1.96
SEC23A-207ENST00000554615 A0A087X0K7 114 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 IGHV3-15A0A0B4J1V0 119 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 ARGFXA6NJG6 315 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 LINC01619G3V211 115 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 UPK2O00526 184 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 SH2D1BO14796 132 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 MGST3O14880 152 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 GMFGO60234 142 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 GDF9O60383 454 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 RNASE2P10153 161 aaKnown RBP2.79□□□□□ -1.96
SEC23A-207ENST00000554615 ATF4P18848 351 aaPredicted RBP2.79□□□□□ -1.96
SEC23A-207ENST00000554615 GLRXP35754 106 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 THBS3P49746 956 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 PPOXP50336 477 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 SNRPEP62304 92 aaKnown RBP2.79□□□□□ -1.96
SEC23A-207ENST00000554615 HBG1P69891 147 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 HBG2P69892 147 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 CX3CL1P78423 397 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 OR5I1Q13606 314 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 TBC1D28Q2M2D7 210 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 ACOT6Q3I5F7 207 aaPredicted RBP2.79□□□□□ -1.96
SEC23A-207ENST00000554615 TMEM136Q6ZRR5 245 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 P4HA3Q7Z4N8 544 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 OR10J5Q8NHC4 309 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 APH1AQ96BI3 265 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 CENPMQ9NSP4 180 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 IL36BQ9NZH7 164 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 B4GALT7Q9UBV7 327 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 RFNGQ9Y644 331 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 SMG1Q96Q15 3661 aaKnown RBP2.79□□□□□ -1.96
SEC23A-207ENST00000554615 TGIF2-C20orf24A0A0A6YYL0 155 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 A0A1W2PPE2 198 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 WI2-2373I1.2A0A1W2PRP0 233 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 TRAPPC2LH3BP13 241 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 WRBO00258 174 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 NBR2O15453 112 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 HSPA12AO43301 675 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 RAMP3O60896 148 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 LTAP01374 205 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 IGLV1-47P01700 117 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 KLK3P07288 261 aaPredicted RBP2.79□□□□□ -1.96
SEC23A-207ENST00000554615 NQO2P16083 231 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 EGR1P18146 543 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 WT1P19544 449 aaPredicted RBP2.79□□□□□ -1.96
SEC23A-207ENST00000554615 RAB7AP51149 207 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 C1orf122Q6ZSJ8 110 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 OR5D18Q8NGL1 313 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 FER1L6-AS2Q96M78 137 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 ZMAT4Q9H898 229 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 EDA2RQ9HAV5 297 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 PLA2G3Q9NZ20 509 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 RPUSD1Q9UJJ7 312 aaKnown RBP2.79□□□□□ -1.96
SEC23A-207ENST00000554615 LINC00312Q9Y6C7 94 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 ALPK2Q86TB3 2170 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 IGKV1OR2-108A0A075B7D4 117 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 KBTBD11-OT1A0A1B0GTJ5 212 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 LNP1A1A4G5 178 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 PGPEP1LA6NFU8 196 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 OR5H1A6NKK0 313 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 KLRC4-KLRK1H3BQV0 150 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 HBZP02008 142 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 PRKACAP17612 351 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 PLA2G5P39877 138 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 NBL1P41271 181 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 MAGEA5P43359 124 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 GPM6AP51674 278 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 SLC38A11Q08AI6 406 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 FABP9Q0Z7S8 132 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 OR2B11Q5JQS5 317 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 WDR73Q6P4I2 378 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 TEX38Q6PEX7 206 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 CMTM1Q8IZ96 169 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 C1orf87Q8N0U7 546 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 TMEM116Q8NCL8 245 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 PARLQ9H300 379 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 PSENENQ9NZ42 101 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 CLN8Q9UBY8 286 aa2.79□□□□□ -1.96
SEC23A-207ENST00000554615 IGHV4-4A0A075B6R2 117 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.78□□□□□ -1.96
SEC23A-207ENST00000554615 WDR1O75083 606 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 CXorf1O96002 111 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 GP9P14770 177 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 PI3P19957 117 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 HAAOP46952 286 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms