RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 RRNAD1Q96FB5 475 aaKnown RBP10.04□□□□□ -0.8
SHMT2-214ENST00000554604 SPIN2AQ99865 258 aa10.04□□□□□ -0.8
SHMT2-214ENST00000554604 SPIN2BQ9BPZ2 258 aa10.04□□□□□ -0.8
SHMT2-214ENST00000554604 TAF9BQ9HBM6 251 aa10.04□□□□□ -0.8
SHMT2-214ENST00000554604 TET2Q6N021 2002 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-214ENST00000554604 TRGV10A0A0A0MS01 117 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 HSD17B6O14756 317 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 PGLYRP1O75594 196 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-214ENST00000554604 SPDEFO95238 335 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 NMBP08949 121 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 RRASP10301 218 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 P2RX3P56373 397 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 S100A10P60903 97 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 TMEM268Q5VZI3 342 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 ALKAL2Q6UX46 152 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 TREML4Q6UXN2 200 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 LHFPL4Q7Z7J7 247 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 SELENOHQ8IZQ5 122 aaKnown RBP10.03□□□□□ -0.8
SHMT2-214ENST00000554604 SLC35G3Q8N808 338 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 OR4C13Q8NGP0 309 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 IL1F10Q8WWZ1 152 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 COQ2Q96H96 371 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 AJUBAQ96IF1 538 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 ABHD14BQ96IU4 210 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 ZNF471Q9BX82 626 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-214ENST00000554604 SLC25A32Q9H2D1 315 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 GAL3ST2Q9H3Q3 398 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 C16orf95Q9H693 158 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 PLEKHA2Q9HB19 425 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 OR1A1Q9P1Q5 309 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 TBL2Q9Y4P3 447 aaKnown RBP10.03□□□□□ -0.8
SHMT2-214ENST00000554604 SESN1Q9Y6P5 492 aa10.03□□□□□ -0.8
SHMT2-214ENST00000554604 NOTCH1P46531 2555 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 E5RGE8 158 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 K7EPK0 472 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 TAAR5O14804 337 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 TIMM23O14925 209 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 HSPA12AO43301 675 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 TSPAN9O75954 239 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 F2RP25116 425 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 PROK1P58294 105 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 AESQ08117 197 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 MSMO1Q15800 293 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 SSX2Q16385 188 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 TCF23Q7RTU1 214 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 ZNF695Q8IW36 515 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 FAM71E2Q8N5Q1 922 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 ZBTB34Q8NCN2 500 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 OR11H6Q8NGC7 330 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 OR4D5Q8NGN0 318 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 MALSU1Q96EH3 234 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 CITED1Q99966 193 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 CLEC7AQ9BXN2 247 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 TMEM133Q9H2Q1 129 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 CYTL1Q9NRR1 136 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 NSG2Q9Y328 171 aa10.02□□□□□ -0.81
SHMT2-214ENST00000554604 TRAV39A0A0B4J263 110 aa10.01□□□□□ -0.81
SHMT2-214ENST00000554604 MSGN1A6NI15 193 aa10.01□□□□□ -0.81
SHMT2-214ENST00000554604 ODF3BA8MYP8 253 aa10.01□□□□□ -0.81
SHMT2-214ENST00000554604 C12orf77C9JDV5 145 aa10.01□□□□□ -0.81
SHMT2-214ENST00000554604 M0QZ24 198 aa10.01□□□□□ -0.81
SHMT2-214ENST00000554604 ST8SIA3O43173 380 aa10.01□□□□□ -0.81
SHMT2-214ENST00000554604 MBPP02686 304 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-214ENST00000554604 TPT1P13693 172 aaKnown RBP10.01□□□□□ -0.81
SHMT2-214ENST00000554604 VDAC1P21796 283 aa10.01□□□□□ -0.81
SHMT2-214ENST00000554604 GLIPR1P48060 266 aa10.01□□□□□ -0.81
SHMT2-214ENST00000554604 EIF5AP63241 154 aaKnown RBP10.01□□□□□ -0.81
SHMT2-214ENST00000554604 KRBOX4Q5JUW0 171 aa10.01□□□□□ -0.81
SHMT2-214ENST00000554604 COMMD7Q86VX2 200 aa10.01□□□□□ -0.81
SHMT2-214ENST00000554604 OR2T6Q8NHC8 308 aa10.01□□□□□ -0.81
SHMT2-214ENST00000554604 RBPMSQ93062 196 aaKnown RBP10.01□□□□□ -0.81
SHMT2-214ENST00000554604 GALMQ96C23 342 aa10.01□□□□□ -0.81
SHMT2-214ENST00000554604 CITED4Q96RK1 184 aa10.01□□□□□ -0.81
SHMT2-214ENST00000554604 NPFFR1Q9GZQ6 430 aa10.01□□□□□ -0.81
SHMT2-214ENST00000554604 NCOR1P1Q9H4R4 102 aa10.01□□□□□ -0.81
SHMT2-214ENST00000554604 LSM5Q9Y4Y9 91 aaKnown RBP10.01□□□□□ -0.81
SHMT2-214ENST00000554604 IGHV2-26A0A0B4J1V2 119 aa10□□□□□ -0.81
SHMT2-214ENST00000554604 ODAMA1E959 279 aa10□□□□□ -0.81
SHMT2-214ENST00000554604 IGLV2-14P01704 120 aa10□□□□□ -0.81
SHMT2-214ENST00000554604 SLC25A6P12236 298 aa10□□□□□ -0.81
SHMT2-214ENST00000554604 RPL12P30050 165 aaKnown RBP10□□□□□ -0.81
SHMT2-214ENST00000554604 CEACAM6P40199 344 aa10□□□□□ -0.81
SHMT2-214ENST00000554604 RAB13P51153 203 aa10□□□□□ -0.81
SHMT2-214ENST00000554604 NMSQ5H8A3 153 aa10□□□□□ -0.81
SHMT2-214ENST00000554604 MINOS1Q5TGZ0 78 aa10□□□□□ -0.81
SHMT2-214ENST00000554604 PRAMEF5Q5TYX0 476 aa10□□□□□ -0.81
SHMT2-214ENST00000554604 DYNAPQ8N1N2 210 aa10□□□□□ -0.81
SHMT2-214ENST00000554604 OR1L1Q8NH94 360 aa10□□□□□ -0.81
SHMT2-214ENST00000554604 LRRC20Q8TCA0 184 aa10□□□□□ -0.81
SHMT2-214ENST00000554604 TAS2R3Q9NYW6 316 aa10□□□□□ -0.81
SHMT2-214ENST00000554604 PITPNC1Q9UKF7 332 aa10□□□□□ -0.81
SHMT2-214ENST00000554604 HILPDAQ9Y5L2 63 aa10□□□□□ -0.81
SHMT2-214ENST00000554604 MINOS1-NBL1R4GNA1 71 aa10□□□□□ -0.81
SHMT2-214ENST00000554604 MEGF8Q7Z7M0 2845 aa9.99□□□□□ -0.81
SHMT2-214ENST00000554604 F2RL2O00254 374 aa9.99□□□□□ -0.81
SHMT2-214ENST00000554604 KCNAB3O43448 404 aa9.99□□□□□ -0.81
SHMT2-214ENST00000554604 SCGB1D2O95969 90 aa9.99□□□□□ -0.81
SHMT2-214ENST00000554604 HBZP02008 142 aa9.99□□□□□ -0.81
SHMT2-214ENST00000554604 HTR1DP28221 377 aa9.99□□□□□ -0.81
SHMT2-214ENST00000554604 P2RY1P47900 373 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms