RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 SLIRPQ9GZT3 109 aaKnown RBP5.09□□□□□ -1.59
SLIRP-203ENST00000554074 ALX4Q9H161 411 aaPredicted RBP5.09□□□□□ -1.59
SLIRP-203ENST00000554074 AUNIPQ9H7T9 357 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 RANGRFQ9HD47 186 aaPredicted RBP5.09□□□□□ -1.59
SLIRP-203ENST00000554074 SLC35D1Q9NTN3 355 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 COMMD3Q9UBI1 195 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 A6NHS1 94 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 A8MZ25 164 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 FAM25AB3EWG3 89 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 FAM25CB3EWG5 89 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 FAM25GB3EWG6 89 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 CTDSPLO15194 276 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 RGS5O15539 181 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 SLC25A17O43808 307 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 HPGDSO60760 199 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 LY86O95711 162 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 IGLV1-51P01701 117 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 GSTT2P0CG29 244 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 GSTT2BP0CG30 244 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 GP9P14770 177 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 SPNP16150 400 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 ELK1P19419 428 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 TBPP20226 339 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 AADACP22760 399 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 PRSS3P35030 304 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 SSBP2P81877 361 aaPredicted RBP5.08□□□□□ -1.6
SLIRP-203ENST00000554074 PLA2G7Q13093 441 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 CBX3Q13185 183 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 RTL8BQ17RB0 113 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 TMEM177Q53S58 311 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 CNIH2Q6PI25 160 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 POC5Q8NA72 575 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 MCFD2Q8NI22 146 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 ADTRPQ96IZ2 230 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 HARBI1Q96MB7 349 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 OR4C12Q96R67 309 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 CLCC1Q96S66 551 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 ELOVL1Q9BW60 279 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 OR2D2Q9H210 308 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 SDHAF2Q9NX18 166 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 ANAPC10Q9UM13 185 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 BIRC6Q9NR09 4857 aa5.08□□□□□ -1.6
SLIRP-203ENST00000554074 C13orf42A0A1B0GVH6 325 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 TMEM235A6NFC5 223 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 BET1O15155 118 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 SLC22A5O76082 557 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 CNIH1O95406 144 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 IGHV3-11P01762 117 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 EIF4EP06730 217 aaKnown RBP5.07□□□□□ -1.6
SLIRP-203ENST00000554074 FRMD6-AS1P0C7T7 363 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 NAT1P18440 290 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 LINC00205P59089 165 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 TAS2R46P59540 309 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 TAS2R20P59543 309 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 KLF5Q13887 457 aaPredicted RBP5.07□□□□□ -1.6
SLIRP-203ENST00000554074 IGSF11Q5DX21 431 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 ZNF343Q6P1L6 599 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 HOGA1Q86XE5 327 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 SBSPONQ8IVN8 264 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 H1FOOQ8IZA3 346 aaPredicted RBP5.07□□□□□ -1.6
SLIRP-203ENST00000554074 TEX45Q8NA69 505 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 GRPEL2Q8TAA5 225 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 OSR1Q8TAX0 266 aaPredicted RBP5.07□□□□□ -1.6
SLIRP-203ENST00000554074 GPX8Q8TED1 209 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 CASTOR1Q8WTX7 329 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 DEDD2Q8WXF8 326 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 DDB2Q92466 427 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 C5orf30Q96GV9 206 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 DIRAS2Q96HU8 199 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 USMG5Q96IX5 58 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 MS4A10Q96PG2 267 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 ASCL2Q99929 193 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 GINS4Q9BRT9 223 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 TINAGL1Q9GZM7 467 aaPredicted RBP5.07□□□□□ -1.6
SLIRP-203ENST00000554074 C6orf62Q9GZU0 229 aaPredicted RBP5.07□□□□□ -1.6
SLIRP-203ENST00000554074 IFT46Q9NQC8 304 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 TAS2R8Q9NYW2 309 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 SIGLEC8Q9NYZ4 499 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 EXTL2Q9UBQ6 330 aa5.07□□□□□ -1.6
SLIRP-203ENST00000554074 EPPK1P58107 5090 aaKnown RBP5.06□□□□□ -1.6
SLIRP-203ENST00000554074 GABARAPH6UMI1 98 aa5.06□□□□□ -1.6
SLIRP-203ENST00000554074 CTDSP2O14595 271 aa5.06□□□□□ -1.6
SLIRP-203ENST00000554074 SHOXO15266 292 aa5.06□□□□□ -1.6
SLIRP-203ENST00000554074 GSTZ1O43708 216 aaPredicted RBP5.06□□□□□ -1.6
SLIRP-203ENST00000554074 CREBL2O60519 120 aaPredicted RBP5.06□□□□□ -1.6
SLIRP-203ENST00000554074 HLA-DQB1P01920 261 aa5.06□□□□□ -1.6
SLIRP-203ENST00000554074 DUTP33316 252 aaKnown RBP5.06□□□□□ -1.6
SLIRP-203ENST00000554074 RCVRNP35243 200 aa5.06□□□□□ -1.6
SLIRP-203ENST00000554074 ETV6P41212 452 aa5.06□□□□□ -1.6
SLIRP-203ENST00000554074 UBE2KP61086 200 aa5.06□□□□□ -1.6
SLIRP-203ENST00000554074 PJVKQ0ZLH3 352 aa5.06□□□□□ -1.6
SLIRP-203ENST00000554074 MSMO1Q15800 293 aa5.06□□□□□ -1.6
SLIRP-203ENST00000554074 MRGPRG-AS1Q2M3A8 158 aa5.06□□□□□ -1.6
SLIRP-203ENST00000554074 VMA21Q3ZAQ7 101 aa5.06□□□□□ -1.6
SLIRP-203ENST00000554074 FAM209BQ5JX69 171 aa5.06□□□□□ -1.6
SLIRP-203ENST00000554074 SPANXN2Q5MJ10 180 aa5.06□□□□□ -1.6
SLIRP-203ENST00000554074 LAX1Q8IWV1 398 aa5.06□□□□□ -1.6
SLIRP-203ENST00000554074 BVESQ8NE79 360 aa5.06□□□□□ -1.6
SLIRP-203ENST00000554074 BEST4Q8NFU0 473 aa5.06□□□□□ -1.6
SLIRP-203ENST00000554074 OR5T1Q8NG75 326 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms