RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 SGPP2Q8IWX5 399 aa9.73□□□□□ -0.85
SHMT2-209ENST00000553949 TAF15Q92804 592 aaKnown RBP eCLIP9.73□□□□□ -0.85
SHMT2-209ENST00000553949 RASL11BQ9BPW5 248 aa9.73□□□□□ -0.85
SHMT2-209ENST00000553949 FBXL15Q9H469 300 aa9.73□□□□□ -0.85
SHMT2-209ENST00000553949 METTL1Q9UBP6 276 aaKnown RBP9.73□□□□□ -0.85
SHMT2-209ENST00000553949 TRAV6A0A075B6T7 132 aa9.72□□□□□ -0.85
SHMT2-209ENST00000553949 HRASP01112 189 aa9.72□□□□□ -0.85
SHMT2-209ENST00000553949 CRYGBP07316 175 aa9.72□□□□□ -0.85
SHMT2-209ENST00000553949 NQO2P16083 231 aa9.72□□□□□ -0.85
SHMT2-209ENST00000553949 ANXA7P20073 488 aaKnown RBP9.72□□□□□ -0.85
SHMT2-209ENST00000553949 UCP1P25874 307 aa9.72□□□□□ -0.85
SHMT2-209ENST00000553949 SUPT4H1P63272 117 aaKnown RBP9.72□□□□□ -0.85
SHMT2-209ENST00000553949 RELBQ01201 579 aa9.72□□□□□ -0.85
SHMT2-209ENST00000553949 DHODHQ02127 395 aa9.72□□□□□ -0.85
SHMT2-209ENST00000553949 DCTN2Q13561 401 aaKnown RBP9.72□□□□□ -0.85
SHMT2-209ENST00000553949 PLGLAQ15195 96 aa9.72□□□□□ -0.85
SHMT2-209ENST00000553949 VMA21Q3ZAQ7 101 aa9.72□□□□□ -0.85
SHMT2-209ENST00000553949 VKORC1L1Q8N0U8 176 aa9.72□□□□□ -0.85
SHMT2-209ENST00000553949 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-209ENST00000553949 DUSP18Q8NEJ0 188 aa9.72□□□□□ -0.85
SHMT2-209ENST00000553949 GALNT14Q96FL9 552 aa9.72□□□□□ -0.85
SHMT2-209ENST00000553949 AIFM2Q9BRQ8 373 aa9.72□□□□□ -0.85
SHMT2-209ENST00000553949 TMEM222Q9H0R3 208 aa9.72□□□□□ -0.85
SHMT2-209ENST00000553949 RANBP3Q9H6Z4 567 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-209ENST00000553949 NUDT15Q9NV35 164 aa9.72□□□□□ -0.85
SHMT2-209ENST00000553949 COMMD9Q9P000 198 aa9.72□□□□□ -0.85
SHMT2-209ENST00000553949 KCNIP3Q9Y2W7 256 aa9.72□□□□□ -0.85
SHMT2-209ENST00000553949 NUBP2Q9Y5Y2 271 aa9.72□□□□□ -0.85
SHMT2-209ENST00000553949 TSPAN9O75954 239 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 NDUFA7O95182 113 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 IGKV1-39P01597 117 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 IGKV1D-39P04432 117 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 SAA1P0DJI8 122 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-209ENST00000553949 ANXA3P12429 323 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 RPA2P15927 270 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 RIPPLY3P57055 190 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 UBE2MP61081 183 aaKnown RBP9.71□□□□□ -0.86
SHMT2-209ENST00000553949 ERVK-16P61578 105 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 PPP1R1AQ13522 171 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 POU2AF1Q16633 256 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 TRIM16LQ309B1 348 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 KRTAP24-1Q3LI83 254 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 C9orf152Q5JTZ5 239 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 LIN54Q6MZP7 749 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 Q6ZS46 218 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 Q6ZSV7 163 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 TEX45Q8NA69 505 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 DMBX1Q8NFW5 382 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 GLYATL2Q8WU03 294 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 R3HDM4Q96D70 268 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 RHOVQ96L33 236 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 PRSS22Q9GZN4 317 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 ZNF702PQ9H963 129 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 TPSG1Q9NRR2 321 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 SIGLEC9Q9Y336 463 aa9.71□□□□□ -0.86
SHMT2-209ENST00000553949 MARCH11A6NNE9 402 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 FCN1O00602 326 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 OR2A4O95047 310 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 SFT2D2O95562 160 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 CDS2O95674 445 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 KRASP01116 189 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 HLA-DRB1P01911 266 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 H2AFB2P0C5Z0 115 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 OR4E1P0C645 316 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 HKR1P10072 659 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 VAMP1P23763 118 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 G6PCP35575 357 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 RAG2P55895 527 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 TMEM187Q14656 261 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 OR4A47Q6IF82 309 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 SSX9Q7RTT3 188 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 PPP1R27Q86WC6 154 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 PUSL1Q8N0Z8 303 aaKnown RBP9.7□□□□□ -0.86
SHMT2-209ENST00000553949 Q8N2B8 174 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 VSTM2AQ8TAG5 236 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 OR2A7Q96R45 310 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 CLCC1Q96S66 551 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 ALX4Q9H161 411 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-209ENST00000553949 BEX1Q9HBH7 125 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 PRR13Q9NZ81 148 aa9.7□□□□□ -0.86
SHMT2-209ENST00000553949 KBTBD11O94819 623 aa9.69□□□□□ -0.86
SHMT2-209ENST00000553949 PTTG1O95997 202 aa9.69□□□□□ -0.86
SHMT2-209ENST00000553949 CA2P00918 260 aa9.69□□□□□ -0.86
SHMT2-209ENST00000553949 MECP2P51608 486 aaKnown RBP9.69□□□□□ -0.86
SHMT2-209ENST00000553949 RAB25P57735 213 aa9.69□□□□□ -0.86
SHMT2-209ENST00000553949 PJVKQ0ZLH3 352 aa9.69□□□□□ -0.86
SHMT2-209ENST00000553949 DHRS2Q13268 280 aa9.69□□□□□ -0.86
SHMT2-209ENST00000553949 PRSS8Q16651 343 aa9.69□□□□□ -0.86
SHMT2-209ENST00000553949 MRGPRG-AS1Q2M3A8 158 aa9.69□□□□□ -0.86
SHMT2-209ENST00000553949 C4orf46Q504U0 113 aa9.69□□□□□ -0.86
SHMT2-209ENST00000553949 PLET1Q6UQ28 207 aa9.69□□□□□ -0.86
SHMT2-209ENST00000553949 ZNF695Q8IW36 515 aa9.69□□□□□ -0.86
SHMT2-209ENST00000553949 SELENOHQ8IZQ5 122 aaKnown RBP9.69□□□□□ -0.86
SHMT2-209ENST00000553949 OR4F5Q8NH21 305 aa9.69□□□□□ -0.86
SHMT2-209ENST00000553949 OR4A5Q8NH83 315 aa9.69□□□□□ -0.86
SHMT2-209ENST00000553949 LHFPL5Q8TAF8 219 aa9.69□□□□□ -0.86
SHMT2-209ENST00000553949 SEC22AQ96IW7 307 aa9.69□□□□□ -0.86
SHMT2-209ENST00000553949 TMEM56Q96MV1 263 aa9.69□□□□□ -0.86
SHMT2-209ENST00000553949 HSPB9Q9BQS6 159 aa9.69□□□□□ -0.86
SHMT2-209ENST00000553949 C16orf95Q9H693 158 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms