RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 ECSCRQ19T08 205 aa9.31□□□□□ -0.92
TMEM253-202ENST00000553744 C19orf54Q5BKX5 351 aa9.31□□□□□ -0.92
TMEM253-202ENST00000553744 AADACL3Q5VUY0 350 aa9.31□□□□□ -0.92
TMEM253-202ENST00000553744 FOXB2Q5VYV0 432 aa9.31□□□□□ -0.92
TMEM253-202ENST00000553744 CMTM1Q8IZ96 169 aa9.31□□□□□ -0.92
TMEM253-202ENST00000553744 SPAG16Q8N0X2 631 aa9.31□□□□□ -0.92
TMEM253-202ENST00000553744 RNF152Q8N8N0 203 aa9.31□□□□□ -0.92
TMEM253-202ENST00000553744 TEX45Q8NA69 505 aa9.31□□□□□ -0.92
TMEM253-202ENST00000553744 OR51H1Q8NH63 302 aa9.31□□□□□ -0.92
TMEM253-202ENST00000553744 FAM110DQ8TAY7 271 aaPredicted RBP9.31□□□□□ -0.92
TMEM253-202ENST00000553744 ABHD5Q8WTS1 349 aa9.31□□□□□ -0.92
TMEM253-202ENST00000553744 ARPC1AQ92747 370 aa9.31□□□□□ -0.92
TMEM253-202ENST00000553744 DGCR14Q96DF8 476 aaKnown RBP9.31□□□□□ -0.92
TMEM253-202ENST00000553744 WSB1Q9Y6I7 421 aa9.31□□□□□ -0.92
TMEM253-202ENST00000553744 NOTCH1P46531 2555 aa9.31□□□□□ -0.92
TMEM253-202ENST00000553744 ARPC1BO15143 372 aaKnown RBP9.3□□□□□ -0.92
TMEM253-202ENST00000553744 PGLYRP1O75594 196 aaPredicted RBP9.3□□□□□ -0.92
TMEM253-202ENST00000553744 RAB3DO95716 219 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 RLN1P04808 185 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 PSMB8P28062 276 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 UCP3P55916 312 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 RPL23AP62750 156 aaKnown RBP9.3□□□□□ -0.92
TMEM253-202ENST00000553744 GNB1P62873 340 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 PJVKQ0ZLH3 352 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 FXYD3Q14802 87 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 MRGPRG-AS1Q2M3A8 158 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 CXorf66Q5JRM2 361 aaPredicted RBP9.3□□□□□ -0.92
TMEM253-202ENST00000553744 STEAP1BQ6NZ63 245 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 LPCAT3Q6P1A2 487 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 IDO2Q6ZQW0 420 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 LHFPL1Q86WI0 220 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 SLC38A6Q8IZM9 456 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 TCTEX1D1Q8N7M0 179 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 MINDY2Q8NBR6 621 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 OR4F17Q8NGA8 305 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 OR4D10Q8NGI6 311 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 R3HDM4Q96D70 268 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 OR4F4Q96R69 305 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 FAM103A1Q9BTL3 118 aaKnown RBP9.3□□□□□ -0.92
TMEM253-202ENST00000553744 RSRP1Q9BUV0 290 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 ZFP57Q9NU63 452 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 V9GYH0 126 aa9.3□□□□□ -0.92
TMEM253-202ENST00000553744 CREBL2O60519 120 aaPredicted RBP9.29□□□□□ -0.92
TMEM253-202ENST00000553744 CNIH1O95406 144 aa9.29□□□□□ -0.92
TMEM253-202ENST00000553744 IGLV1-40P01703 118 aa9.29□□□□□ -0.92
TMEM253-202ENST00000553744 RPLP1P05386 114 aaKnown RBP9.29□□□□□ -0.92
TMEM253-202ENST00000553744 PF4V1P10720 104 aa9.29□□□□□ -0.92
TMEM253-202ENST00000553744 S100GP29377 79 aa9.29□□□□□ -0.92
TMEM253-202ENST00000553744 TMEM267Q0VDI3 215 aaPredicted RBP9.29□□□□□ -0.92
TMEM253-202ENST00000553744 MEF2DQ14814 521 aa9.29□□□□□ -0.92
TMEM253-202ENST00000553744 PRSS8Q16651 343 aa9.29□□□□□ -0.92
TMEM253-202ENST00000553744 PHLDA2Q53GA4 152 aa9.29□□□□□ -0.92
TMEM253-202ENST00000553744 AKIRIN2Q53H80 203 aa9.29□□□□□ -0.92
TMEM253-202ENST00000553744 LCNL1Q6ZST4 164 aa9.29□□□□□ -0.92
TMEM253-202ENST00000553744 CCDC190Q86UF4 302 aa9.29□□□□□ -0.92
TMEM253-202ENST00000553744 VKORC1L1Q8N0U8 176 aa9.29□□□□□ -0.92
TMEM253-202ENST00000553744 PUSL1Q8N0Z8 303 aaKnown RBP9.29□□□□□ -0.92
TMEM253-202ENST00000553744 POC5Q8NA72 575 aa9.29□□□□□ -0.92
TMEM253-202ENST00000553744 GRPEL2Q8TAA5 225 aa9.29□□□□□ -0.92
TMEM253-202ENST00000553744 VSTM2AQ8TAG5 236 aa9.29□□□□□ -0.92
TMEM253-202ENST00000553744 CD300LFQ8TDQ1 290 aa9.29□□□□□ -0.92
TMEM253-202ENST00000553744 FOXA2Q9Y261 457 aaPredicted RBP9.29□□□□□ -0.92
TMEM253-202ENST00000553744 NUBP2Q9Y5Y2 271 aa9.29□□□□□ -0.92
TMEM253-202ENST00000553744 A0A1W2PN81 502 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 ANKRD20A5PA0PJZ0 165 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 SOX15O60248 233 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 KBTBD11O94819 623 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 OR2A4O95047 310 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 S1PR2O95136 353 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 HPRT1P00492 218 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 HRASP01112 189 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 ZNF735P0CB33 412 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 AKAIN1P0CW23 69 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 PGAM2P15259 253 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 F2RP25116 425 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 SLC6A1P30531 599 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 CHRNA7P36544 502 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 TAS2R31P59538 309 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 ZNF79Q15937 498 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 TNXAQ16473 311 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 FAAP20Q6NZ36 180 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 UNQ5815/PRO19632Q6UWF5 114 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 C18orf65Q6ZTR6 163 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 MMD2Q8IY49 270 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 LFNGQ8NES3 379 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 MYOZ3Q8TDC0 251 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 RHOVQ96L33 236 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 OR2A7Q96R45 310 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 AIFM2Q9BRQ8 373 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 ZNF430Q9H8G1 570 aaPredicted RBP9.28□□□□□ -0.92
TMEM253-202ENST00000553744 PLEKHA2Q9HB19 425 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 COMMD9Q9P000 198 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 VWFP04275 2813 aa9.28□□□□□ -0.92
TMEM253-202ENST00000553744 NUDT19A8MXV4 375 aa9.27□□□□□ -0.93
TMEM253-202ENST00000553744 NQO2P16083 231 aa9.27□□□□□ -0.93
TMEM253-202ENST00000553744 PTBP1P26599 531 aaKnown RBP eCLIP9.27□□□□□ -0.93
TMEM253-202ENST00000553744 ETV6P41212 452 aa9.27□□□□□ -0.93
TMEM253-202ENST00000553744 PPP5CP53041 499 aa9.27□□□□□ -0.93
TMEM253-202ENST00000553744 RND3P61587 244 aa9.27□□□□□ -0.93
TMEM253-202ENST00000553744 POU2AF1Q16633 256 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms