RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 TPPP3Q9BW30 176 aa4.32□□□□□ -1.72
SMARCE1P3-201ENST00000553649 DCSTAMPQ9H295 470 aa4.32□□□□□ -1.72
SMARCE1P3-201ENST00000553649 MOB1AQ9H8S9 216 aa4.32□□□□□ -1.72
SMARCE1P3-201ENST00000553649 PLEKHA2Q9HB19 425 aa4.32□□□□□ -1.72
SMARCE1P3-201ENST00000553649 EXOSC4Q9NPD3 245 aaKnown RBP4.32□□□□□ -1.72
SMARCE1P3-201ENST00000553649 ISYNA1Q9NPH2 558 aa4.32□□□□□ -1.72
SMARCE1P3-201ENST00000553649 TMEM138Q9NPI0 162 aa4.32□□□□□ -1.72
SMARCE1P3-201ENST00000553649 MGAT4CQ9UBM8 478 aa4.32□□□□□ -1.72
SMARCE1P3-201ENST00000553649 DKK2Q9UBU2 259 aa4.32□□□□□ -1.72
SMARCE1P3-201ENST00000553649 STUB1Q9UNE7 303 aa4.32□□□□□ -1.72
SMARCE1P3-201ENST00000553649 AMMECR1Q9Y4X0 333 aaPredicted RBP4.32□□□□□ -1.72
SMARCE1P3-201ENST00000553649 HSPB11Q9Y547 144 aa4.32□□□□□ -1.72
SMARCE1P3-201ENST00000553649 TMEM14AQ9Y6G1 99 aa4.32□□□□□ -1.72
SMARCE1P3-201ENST00000553649 MEIKINA0A087WXM9 373 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 TRAV39A0A0B4J263 110 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 TRBV2A0A0J9YWF9 115 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 A0A1B0GV72 72 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 A0A1W2PPI3 338 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 A4D1N5 150 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 FAM90A18PA6NE21 464 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 FAM90A16PA6NEW6 464 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 FAM90A9PA6NNJ1 464 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 FAM90A5PA8MXJ8 464 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 OOSP1A8MZH6 123 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 C1orf196B1AJZ1 125 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 ZNF670-ZNF695F2Z2N8 137 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 J3QR06 171 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 AIPO00170 330 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 AP4M1O00189 453 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 FGF16O43320 207 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 SAP30O75446 220 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 SRSF10O75494 262 aaKnown RBP4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 LY6G6CO95867 125 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 CST1P01037 141 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 IGHG2P01859 326 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 MT-ND2P03891 347 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 FGF2P09038 288 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 FAM90A15PP0C7V4 464 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 FAM90A14PP0C7W9 464 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 NQO2P16083 231 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 SPNP16150 400 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 VDAC1P21796 283 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 PRKACGP22612 351 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 CD34P28906 385 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 MAS1LP35410 378 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 CCR6P51684 374 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 ATP1B3P54709 279 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 WNT4P56705 351 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 RPS20P60866 119 aaKnown RBP4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 CDC42P60953 191 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 MADCAM1Q13477 382 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 SRSF7Q16629 238 aaKnown RBP eCLIP4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 C17orf58Q2M2W7 97 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 SPIN3Q5JUX0 258 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 LEMD1Q68G75 181 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 FAM53AQ6NSI3 398 aaPredicted RBP4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 PLET1Q6UQ28 207 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 TMEM179BQ7Z7N9 219 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 CATSPERDQ86XM0 798 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 Q8IYB0 196 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 SELENOHQ8IZQ5 122 aaKnown RBP4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 ZNF383Q8NA42 475 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 BPIFB6Q8NFQ5 453 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 OR1N2Q8NGR9 330 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 LINC00052Q96N35 136 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 SPACA5Q96QH8 159 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 TM2D3Q9BRN9 247 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 TMEM208Q9BTX3 173 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 NDUFAF3Q9BU61 184 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 NKX6-2Q9C056 277 aaPredicted RBP4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 CHST5Q9GZS9 411 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 PPIL3Q9H2H8 161 aaKnown RBP4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 MAGIXQ9H6Y5 334 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 ZNF430Q9H8G1 570 aaPredicted RBP4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 MRPS18AQ9NVS2 196 aaKnown RBP4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 GHRLQ9UBU3 117 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 MRM2Q9UI43 246 aaKnown RBP4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 FBXO7Q9Y3I1 522 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 COX11Q9Y6N1 276 aa4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 DMBT1Q9UGM3 2413 aaPredicted RBP4.31□□□□□ -1.72
SMARCE1P3-201ENST00000553649 PKD1P98161 4303 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 IGKV1-12A0A0C4DH73 117 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 KBTBD11-OT1A0A1B0GTJ5 212 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 LOC107986453A0A1B0GWG9 222 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 FAM90A20PA6NIJ5 464 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 DHRS7CA6NNS2 312 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 FAM90A12PA8MX19 464 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 TEX46H3BTG2 121 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 M0R143 59 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 HSD17B6O14756 317 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 DEGS1O15121 323 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 IGKV1D-12P01611 117 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 ALPLP05186 524 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 ELANEP08246 267 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 FAM90A13PP0C7W8 464 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 FAM90A24PP0C7X0 464 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 SRMP19623 302 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 CCL1P22362 96 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 CDX1P47902 265 aaPredicted RBP4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 ELLP55199 621 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms