RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 FANCD2OSQ96PS1 177 aa10.03□□□□□ -0.8
PRPF39-204ENST00000553605 IGHV3-35A0A0C4DH35 117 aa10.02□□□□□ -0.81
PRPF39-204ENST00000553605 CREBL2O60519 120 aaPredicted RBP10.02□□□□□ -0.81
PRPF39-204ENST00000553605 CA1P00915 261 aaPredicted RBP10.02□□□□□ -0.81
PRPF39-204ENST00000553605 IFNA10P01566 189 aa10.02□□□□□ -0.81
PRPF39-204ENST00000553605 RRASP10301 218 aa10.02□□□□□ -0.81
PRPF39-204ENST00000553605 CALB2P22676 271 aa10.02□□□□□ -0.81
PRPF39-204ENST00000553605 PSMB6P28072 239 aa10.02□□□□□ -0.81
PRPF39-204ENST00000553605 HLA-DRB3P79483 266 aa10.02□□□□□ -0.81
PRPF39-204ENST00000553605 ATP6AP1Q15904 470 aa10.02□□□□□ -0.81
PRPF39-204ENST00000553605 C1orf134Q5TEV5 83 aa10.02□□□□□ -0.81
PRPF39-204ENST00000553605 SDHAF2Q9NX18 166 aa10.02□□□□□ -0.81
PRPF39-204ENST00000553605 RDH8Q9NYR8 311 aa10.02□□□□□ -0.81
PRPF39-204ENST00000553605 AASSQ9UDR5 926 aa10.02□□□□□ -0.81
PRPF39-204ENST00000553605 TRBV7-1A0A0A6YYK4 115 aa10.01□□□□□ -0.81
PRPF39-204ENST00000553605 DPPA5A6NC42 116 aa10.01□□□□□ -0.81
PRPF39-204ENST00000553605 NPIPB5A8MRT5 1133 aa10.01□□□□□ -0.81
PRPF39-204ENST00000553605 RBMY1A1P0DJD3 496 aaKnown RBP10.01□□□□□ -0.81
PRPF39-204ENST00000553605 RBMY1CP0DJD4 496 aa10.01□□□□□ -0.81
PRPF39-204ENST00000553605 CMC4P56277 68 aaPredicted RBP10.01□□□□□ -0.81
PRPF39-204ENST00000553605 RBMY1FQ15415 496 aaKnown RBP10.01□□□□□ -0.81
PRPF39-204ENST00000553605 Q6ZRM9 215 aa10.01□□□□□ -0.81
PRPF39-204ENST00000553605 MMD2Q8IY49 270 aa10.01□□□□□ -0.81
PRPF39-204ENST00000553605 CHRDL1Q9BU40 450 aa10.01□□□□□ -0.81
PRPF39-204ENST00000553605 NDUFAF3Q9BU61 184 aa10.01□□□□□ -0.81
PRPF39-204ENST00000553605 RIMS4Q9H426 269 aaPredicted RBP10.01□□□□□ -0.81
PRPF39-204ENST00000553605 GHRLQ9UBU3 117 aa10.01□□□□□ -0.81
PRPF39-204ENST00000553605 DEFB131BA0A096LNP1 70 aa10□□□□□ -0.81
PRPF39-204ENST00000553605 TRBV6-6A0A0A6YYG2 114 aa10□□□□□ -0.81
PRPF39-204ENST00000553605 TRBV5-5A0A0J9YX44 114 aa10□□□□□ -0.81
PRPF39-204ENST00000553605 A0A1W2PPK0 400 aa10□□□□□ -0.81
PRPF39-204ENST00000553605 TEX22C9J3V5 150 aa10□□□□□ -0.81
PRPF39-204ENST00000553605 CRYZL1O95825 349 aa10□□□□□ -0.81
PRPF39-204ENST00000553605 CTSDP07339 412 aaPredicted RBP10□□□□□ -0.81
PRPF39-204ENST00000553605 HTR2CP28335 458 aa10□□□□□ -0.81
PRPF39-204ENST00000553605 TPBGQ13641 420 aa10□□□□□ -0.81
PRPF39-204ENST00000553605 CDK10Q15131 360 aa10□□□□□ -0.81
PRPF39-204ENST00000553605 PLET1Q6UQ28 207 aa10□□□□□ -0.81
PRPF39-204ENST00000553605 FYTTD1Q96QD9 318 aaKnown RBP10□□□□□ -0.81
PRPF39-204ENST00000553605 ZNF436Q9C0F3 470 aaPredicted RBP10□□□□□ -0.81
PRPF39-204ENST00000553605 OR2D2Q9H210 308 aa10□□□□□ -0.81
PRPF39-204ENST00000553605 MGAT4AQ9UM21 535 aa10□□□□□ -0.81
PRPF39-204ENST00000553605 IGHV4-28A0A0C4DH34 117 aa9.99□□□□□ -0.81
PRPF39-204ENST00000553605 IGKV1-6A0A0C4DH72 117 aa9.99□□□□□ -0.81
PRPF39-204ENST00000553605 MFSD2BA6NFX1 497 aa9.99□□□□□ -0.81
PRPF39-204ENST00000553605 DHFRP00374 187 aa9.99□□□□□ -0.81
PRPF39-204ENST00000553605 IFNA21P01568 189 aa9.99□□□□□ -0.81
PRPF39-204ENST00000553605 IFNA17P01571 189 aa9.99□□□□□ -0.81
PRPF39-204ENST00000553605 SAA1P0DJI8 122 aaPredicted RBP9.99□□□□□ -0.81
PRPF39-204ENST00000553605 RPA2P15927 270 aa9.99□□□□□ -0.81
PRPF39-204ENST00000553605 GPR183P32249 361 aa9.99□□□□□ -0.81
PRPF39-204ENST00000553605 Q499Y3 187 aa9.99□□□□□ -0.81
PRPF39-204ENST00000553605 HSP90B2PQ58FF3 399 aa9.99□□□□□ -0.81
PRPF39-204ENST00000553605 AMIGO2Q86SJ2 522 aa9.99□□□□□ -0.81
PRPF39-204ENST00000553605 OR52I1Q8NGK6 324 aa9.99□□□□□ -0.81
PRPF39-204ENST00000553605 OSR1Q8TAX0 266 aaPredicted RBP9.99□□□□□ -0.81
PRPF39-204ENST00000553605 SMIM19Q96E16 107 aa9.99□□□□□ -0.81
PRPF39-204ENST00000553605 CXorf58Q96LI9 332 aa9.99□□□□□ -0.81
PRPF39-204ENST00000553605 HDHD3Q9BSH5 251 aaPredicted RBP9.99□□□□□ -0.81
PRPF39-204ENST00000553605 AMBNQ9NP70 447 aa9.99□□□□□ -0.81
PRPF39-204ENST00000553605 PLEKHJ1Q9NW61 149 aa9.99□□□□□ -0.81
PRPF39-204ENST00000553605 OGG1O15527 345 aa9.98□□□□□ -0.81
PRPF39-204ENST00000553605 MRPS14O60783 128 aaKnown RBP9.98□□□□□ -0.81
PRPF39-204ENST00000553605 CRYGCP07315 174 aa9.98□□□□□ -0.81
PRPF39-204ENST00000553605 IL6RP08887 468 aaPredicted RBP9.98□□□□□ -0.81
PRPF39-204ENST00000553605 LIMS3P0CW19 117 aa9.98□□□□□ -0.81
PRPF39-204ENST00000553605 LIMS4P0CW20 117 aa9.98□□□□□ -0.81
PRPF39-204ENST00000553605 HIST1H1BP16401 226 aaKnown RBP9.98□□□□□ -0.81
PRPF39-204ENST00000553605 RPS27AP62979 156 aaKnown RBP9.98□□□□□ -0.81
PRPF39-204ENST00000553605 TNP2Q05952 138 aa9.98□□□□□ -0.81
PRPF39-204ENST00000553605 KLK9Q2XQG4 91 aa9.98□□□□□ -0.81
PRPF39-204ENST00000553605 OR10K2Q6IF99 312 aa9.98□□□□□ -0.81
PRPF39-204ENST00000553605 UBE2DNLQ8IWF7 75 aa9.98□□□□□ -0.81
PRPF39-204ENST00000553605 TMEM190Q8WZ59 177 aa9.98□□□□□ -0.81
PRPF39-204ENST00000553605 C5orf30Q96GV9 206 aa9.98□□□□□ -0.81
PRPF39-204ENST00000553605 UQCC2Q9BRT2 126 aa9.98□□□□□ -0.81
PRPF39-204ENST00000553605 Q9N2K0 584 aa9.98□□□□□ -0.81
PRPF39-204ENST00000553605 DAZ1Q9NQZ3 744 aaKnown RBP9.98□□□□□ -0.81
PRPF39-204ENST00000553605 SLC2A9Q9NRM0 540 aa9.98□□□□□ -0.81
PRPF39-204ENST00000553605 AK3Q9UIJ7 227 aa9.98□□□□□ -0.81
PRPF39-204ENST00000553605 KLK9Q9UKQ9 250 aa9.98□□□□□ -0.81
PRPF39-204ENST00000553605 POMPQ9Y244 141 aa9.98□□□□□ -0.81
PRPF39-204ENST00000553605 ELOA3CA0A087WX78 387 aaPredicted RBP9.97□□□□□ -0.81
PRPF39-204ENST00000553605 TRBV5-7A0A0A0MS05 114 aa9.97□□□□□ -0.81
PRPF39-204ENST00000553605 C15orf61A6NNL5 157 aa9.97□□□□□ -0.81
PRPF39-204ENST00000553605 E7EUB6 86 aa9.97□□□□□ -0.81
PRPF39-204ENST00000553605 DEFA4P12838 97 aa9.97□□□□□ -0.81
PRPF39-204ENST00000553605 MIFP14174 115 aa9.97□□□□□ -0.81
PRPF39-204ENST00000553605 RPS11P62280 158 aaKnown RBP eCLIP9.97□□□□□ -0.81
PRPF39-204ENST00000553605 NICN1Q9BSH3 213 aa9.97□□□□□ -0.81
PRPF39-204ENST00000553605 IGLV11-55A0A075B6I3 123 aa9.96□□□□□ -0.82
PRPF39-204ENST00000553605 CD74P04233 296 aa9.96□□□□□ -0.82
PRPF39-204ENST00000553605 INAFM2P0DMQ5 153 aa9.96□□□□□ -0.82
PRPF39-204ENST00000553605 AREGP15514 252 aa9.96□□□□□ -0.82
PRPF39-204ENST00000553605 RPL27AP46776 148 aaKnown RBP9.96□□□□□ -0.82
PRPF39-204ENST00000553605 TFPI2P48307 235 aa9.96□□□□□ -0.82
PRPF39-204ENST00000553605 YIF1BQ5BJH7 314 aa9.96□□□□□ -0.82
PRPF39-204ENST00000553605 SSX9Q7RTT3 188 aa9.96□□□□□ -0.82
PRPF39-204ENST00000553605 ZNF502Q8TBZ5 544 aa9.96□□□□□ -0.82
PRPF39-204ENST00000553605 ADTRPQ96IZ2 230 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms