RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 CNIH1O95406 144 aa17.88■□□□□ 0.45
TDP1-206ENST00000553569 RAB3DO95716 219 aa17.88■□□□□ 0.45
TDP1-206ENST00000553569 RPL23AP62750 156 aaKnown RBP17.88■□□□□ 0.45
TDP1-206ENST00000553569 SSBP1Q04837 148 aaKnown RBP17.88■□□□□ 0.45
TDP1-206ENST00000553569 FOXE3Q13461 319 aa17.88■□□□□ 0.45
TDP1-206ENST00000553569 PHLDA2Q53GA4 152 aa17.88■□□□□ 0.45
TDP1-206ENST00000553569 STEAP1BQ6NZ63 245 aa17.88■□□□□ 0.45
TDP1-206ENST00000553569 VKORC1L1Q8N0U8 176 aa17.88■□□□□ 0.45
TDP1-206ENST00000553569 TEX45Q8NA69 505 aa17.88■□□□□ 0.45
TDP1-206ENST00000553569 OR4F17Q8NGA8 305 aa17.88■□□□□ 0.45
TDP1-206ENST00000553569 OR4F4Q96R69 305 aa17.88■□□□□ 0.45
TDP1-206ENST00000553569 NDUFA13Q9P0J0 144 aa17.88■□□□□ 0.45
TDP1-206ENST00000553569 IGHG4P01861 327 aa17.87■□□□□ 0.45
TDP1-206ENST00000553569 RPLP1P05386 114 aaKnown RBP17.87■□□□□ 0.45
TDP1-206ENST00000553569 PF4V1P10720 104 aa17.87■□□□□ 0.45
TDP1-206ENST00000553569 EGR2P11161 476 aaPredicted RBP17.87■□□□□ 0.45
TDP1-206ENST00000553569 FOXB2Q5VYV0 432 aa17.87■□□□□ 0.45
TDP1-206ENST00000553569 C18orf65Q6ZTR6 163 aa17.87■□□□□ 0.45
TDP1-206ENST00000553569 CMTM1Q8IZ96 169 aa17.87■□□□□ 0.45
TDP1-206ENST00000553569 DGCR14Q96DF8 476 aaKnown RBP17.87■□□□□ 0.45
TDP1-206ENST00000553569 SOSTQ9BQB4 213 aa17.87■□□□□ 0.45
TDP1-206ENST00000553569 A0A1W2PN81 502 aa17.86■□□□□ 0.45
TDP1-206ENST00000553569 NUDT19A8MXV4 375 aa17.86■□□□□ 0.45
TDP1-206ENST00000553569 PGLYRP1O75594 196 aaPredicted RBP17.86■□□□□ 0.45
TDP1-206ENST00000553569 CD74P04233 296 aa17.86■□□□□ 0.45
TDP1-206ENST00000553569 ELANEP08246 267 aa17.86■□□□□ 0.45
TDP1-206ENST00000553569 PGAM2P15259 253 aa17.86■□□□□ 0.45
TDP1-206ENST00000553569 PPIFP30405 207 aaKnown RBP17.86■□□□□ 0.45
TDP1-206ENST00000553569 CHRNA7P36544 502 aa17.86■□□□□ 0.45
TDP1-206ENST00000553569 CRIP2P52943 208 aaPredicted RBP17.86■□□□□ 0.45
TDP1-206ENST00000553569 SSBP2P81877 361 aaPredicted RBP17.86■□□□□ 0.45
TDP1-206ENST00000553569 FAAP20Q6NZ36 180 aa17.86■□□□□ 0.45
TDP1-206ENST00000553569 UNQ5815/PRO19632Q6UWF5 114 aa17.86■□□□□ 0.45
TDP1-206ENST00000553569 SSX9Q7RTT3 188 aa17.86■□□□□ 0.45
TDP1-206ENST00000553569 ARRDC1Q8N5I2 433 aa17.86■□□□□ 0.45
TDP1-206ENST00000553569 POC5Q8NA72 575 aa17.86■□□□□ 0.45
TDP1-206ENST00000553569 GSTZ1O43708 216 aaPredicted RBP17.85■□□□□ 0.45
TDP1-206ENST00000553569 PPP5CP53041 499 aa17.85■□□□□ 0.45
TDP1-206ENST00000553569 TMEM267Q0VDI3 215 aaPredicted RBP17.85■□□□□ 0.45
TDP1-206ENST00000553569 TNXAQ16473 311 aa17.85■□□□□ 0.45
TDP1-206ENST00000553569 PRSS8Q16651 343 aa17.85■□□□□ 0.45
TDP1-206ENST00000553569 MRGPRG-AS1Q2M3A8 158 aa17.85■□□□□ 0.45
TDP1-206ENST00000553569 SCGB2B2Q4G0G5 96 aa17.85■□□□□ 0.45
TDP1-206ENST00000553569 PYDC2Q56P42 97 aa17.85■□□□□ 0.45
TDP1-206ENST00000553569 C19orf54Q5BKX5 351 aa17.85■□□□□ 0.45
TDP1-206ENST00000553569 LPCAT3Q6P1A2 487 aa17.85■□□□□ 0.45
TDP1-206ENST00000553569 SLC38A6Q8IZM9 456 aa17.85■□□□□ 0.45
TDP1-206ENST00000553569 KLHL30-AS1Q8NEE0 82 aa17.85■□□□□ 0.45
TDP1-206ENST00000553569 LFNGQ8NES3 379 aa17.85■□□□□ 0.45
TDP1-206ENST00000553569 RSRP1Q9BUV0 290 aa17.85■□□□□ 0.45
TDP1-206ENST00000553569 ZNF430Q9H8G1 570 aaPredicted RBP17.85■□□□□ 0.45
TDP1-206ENST00000553569 FOXA2Q9Y261 457 aaPredicted RBP17.85■□□□□ 0.45
TDP1-206ENST00000553569 NUBP2Q9Y5Y2 271 aa17.85■□□□□ 0.45
TDP1-206ENST00000553569 V9GYH0 126 aa17.85■□□□□ 0.45
TDP1-206ENST00000553569 RBFOX2O43251 390 aaKnown RBP eCLIP17.84■□□□□ 0.45
TDP1-206ENST00000553569 HRASP01112 189 aa17.84■□□□□ 0.45
TDP1-206ENST00000553569 PSMB8P28062 276 aa17.84■□□□□ 0.45
TDP1-206ENST00000553569 S100GP29377 79 aa17.84■□□□□ 0.45
TDP1-206ENST00000553569 UCP3P55916 312 aa17.84■□□□□ 0.45
TDP1-206ENST00000553569 LHFPL1Q86WI0 220 aa17.84■□□□□ 0.45
TDP1-206ENST00000553569 MINDY2Q8NBR6 621 aa17.84■□□□□ 0.45
TDP1-206ENST00000553569 ZFP57Q9NU63 452 aa17.84■□□□□ 0.45
TDP1-206ENST00000553569 CREBL2O60519 120 aaPredicted RBP17.83■□□□□ 0.44
TDP1-206ENST00000553569 S1PR2O95136 353 aa17.83■□□□□ 0.44
TDP1-206ENST00000553569 PF4P02776 101 aa17.83■□□□□ 0.44
TDP1-206ENST00000553569 AKAIN1P0CW23 69 aa17.83■□□□□ 0.44
TDP1-206ENST00000553569 MEF2DQ14814 521 aa17.83■□□□□ 0.44
TDP1-206ENST00000553569 TMEM65Q6PI78 240 aa17.83■□□□□ 0.44
TDP1-206ENST00000553569 C8orf86Q6ZUL3 223 aa17.83■□□□□ 0.44
TDP1-206ENST00000553569 RNF152Q8N8N0 203 aa17.83■□□□□ 0.44
TDP1-206ENST00000553569 OR4C16Q8NGL9 310 aa17.83■□□□□ 0.44
TDP1-206ENST00000553569 VSTM2AQ8TAG5 236 aa17.83■□□□□ 0.44
TDP1-206ENST00000553569 CASTOR1Q8WTX7 329 aa17.83■□□□□ 0.44
TDP1-206ENST00000553569 RHOVQ96L33 236 aa17.83■□□□□ 0.44
TDP1-206ENST00000553569 KLK15Q9H2R5 256 aa17.83■□□□□ 0.44
TDP1-206ENST00000553569 SOX15O60248 233 aa17.82■□□□□ 0.44
TDP1-206ENST00000553569 ACTL6BO94805 426 aa17.82■□□□□ 0.44
TDP1-206ENST00000553569 KBTBD11O94819 623 aa17.82■□□□□ 0.44
TDP1-206ENST00000553569 OR2A4O95047 310 aa17.82■□□□□ 0.44
TDP1-206ENST00000553569 HPRT1P00492 218 aa17.82■□□□□ 0.44
TDP1-206ENST00000553569 PI3P19957 117 aa17.82■□□□□ 0.44
TDP1-206ENST00000553569 TBC1D26Q86UD7 250 aa17.82■□□□□ 0.44
TDP1-206ENST00000553569 CCDC190Q86UF4 302 aa17.82■□□□□ 0.44
TDP1-206ENST00000553569 MMD2Q8IY49 270 aa17.82■□□□□ 0.44
TDP1-206ENST00000553569 PUSL1Q8N0Z8 303 aaKnown RBP17.82■□□□□ 0.44
TDP1-206ENST00000553569 TCTEX1D1Q8N7M0 179 aa17.82■□□□□ 0.44
TDP1-206ENST00000553569 CD300LFQ8TDQ1 290 aa17.82■□□□□ 0.44
TDP1-206ENST00000553569 OR2A7Q96R45 310 aa17.82■□□□□ 0.44
TDP1-206ENST00000553569 PHB2Q99623 299 aa17.82■□□□□ 0.44
TDP1-206ENST00000553569 TNCP24821 2201 aa17.82■□□□□ 0.44
TDP1-206ENST00000553569 ANKRD20A5PA0PJZ0 165 aa17.81■□□□□ 0.44
TDP1-206ENST00000553569 DISC1C4P0D8 188 aa17.81■□□□□ 0.44
TDP1-206ENST00000553569 IGLV1-40P01703 118 aa17.81■□□□□ 0.44
TDP1-206ENST00000553569 ZNF735P0CB33 412 aa17.81■□□□□ 0.44
TDP1-206ENST00000553569 APELAP0DMC3 54 aa17.81■□□□□ 0.44
TDP1-206ENST00000553569 F2RP25116 425 aa17.81■□□□□ 0.44
TDP1-206ENST00000553569 TAS2R31P59538 309 aa17.81■□□□□ 0.44
TDP1-206ENST00000553569 ZNF79Q15937 498 aa17.81■□□□□ 0.44
TDP1-206ENST00000553569 AKIRIN2Q53H80 203 aa17.81■□□□□ 0.44
TDP1-206ENST00000553569 C10orf55Q5SWW7 151 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms