RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 CBX3Q13185 183 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 CTF1Q16619 201 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 ECSCRQ19T08 205 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 TMEM177Q53S58 311 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 ACSM6Q6P461 480 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 CNIH2Q6PI25 160 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 PPP1R27Q86WC6 154 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 CLVS1Q8IUQ0 354 aaPredicted RBP9.08□□□□□ -0.96
SRP54-203ENST00000553544 SGPP2Q8IWX5 399 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 NUDCD2Q8WVJ2 157 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 OR4C12Q96R67 309 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 CLCC1Q96S66 551 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 SPATA25Q9BR10 227 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 FAM103A1Q9BTL3 118 aaKnown RBP9.08□□□□□ -0.96
SRP54-203ENST00000553544 ST6GALNAC5Q9BVH7 336 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 IFT46Q9NQC8 304 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 C19orf73Q9NVV2 129 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 RABL2AQ9UBK7 228 aaPredicted RBP9.08□□□□□ -0.96
SRP54-203ENST00000553544 RABL2BQ9UNT1 228 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 FOXA2Q9Y261 457 aaPredicted RBP9.08□□□□□ -0.96
SRP54-203ENST00000553544 SRRM4A7MD48 611 aaKnown RBP9.07□□□□□ -0.96
SRP54-203ENST00000553544 LINC00473A8K010 186 aa9.07□□□□□ -0.96
SRP54-203ENST00000553544 LINC01619G3V211 115 aa9.07□□□□□ -0.96
SRP54-203ENST00000553544 TPPPO94811 219 aa9.07□□□□□ -0.96
SRP54-203ENST00000553544 HLA-DQB1P01920 261 aa9.07□□□□□ -0.96
SRP54-203ENST00000553544 RRASP10301 218 aa9.07□□□□□ -0.96
SRP54-203ENST00000553544 ARPC4P59998 168 aa9.07□□□□□ -0.96
SRP54-203ENST00000553544 PJVKQ0ZLH3 352 aa9.07□□□□□ -0.96
SRP54-203ENST00000553544 FXYD3Q14802 87 aa9.07□□□□□ -0.96
SRP54-203ENST00000553544 MRGPRG-AS1Q2M3A8 158 aa9.07□□□□□ -0.96
SRP54-203ENST00000553544 ACTBL2Q562R1 376 aa9.07□□□□□ -0.96
SRP54-203ENST00000553544 PYHIN1Q6K0P9 492 aa9.07□□□□□ -0.96
SRP54-203ENST00000553544 Q8N1Y9 231 aa9.07□□□□□ -0.96
SRP54-203ENST00000553544 BVESQ8NE79 360 aa9.07□□□□□ -0.96
SRP54-203ENST00000553544 LFNGQ8NES3 379 aa9.07□□□□□ -0.96
SRP54-203ENST00000553544 BORCS5Q969J3 196 aa9.07□□□□□ -0.96
SRP54-203ENST00000553544 ADTRPQ96IZ2 230 aa9.07□□□□□ -0.96
SRP54-203ENST00000553544 COMMD3Q9UBI1 195 aa9.07□□□□□ -0.96
SRP54-203ENST00000553544 ANXA10Q9UJ72 324 aa9.07□□□□□ -0.96
SRP54-203ENST00000553544 OR2W1Q9Y3N9 320 aa9.07□□□□□ -0.96
SRP54-203ENST00000553544 A3GALT2U3KPV4 340 aa9.07□□□□□ -0.96
SRP54-203ENST00000553544 TUSC2O75896 110 aa9.06□□□□□ -0.96
SRP54-203ENST00000553544 IGLV2-14P01704 120 aa9.06□□□□□ -0.96
SRP54-203ENST00000553544 NFYAP23511 347 aaPredicted RBP9.06□□□□□ -0.96
SRP54-203ENST00000553544 TGFBR1P36897 503 aa9.06□□□□□ -0.96
SRP54-203ENST00000553544 SLURP1P55000 103 aa9.06□□□□□ -0.96
SRP54-203ENST00000553544 UNQ5815/PRO19632Q6UWF5 114 aa9.06□□□□□ -0.96
SRP54-203ENST00000553544 CASTOR1Q8WTX7 329 aa9.06□□□□□ -0.96
SRP54-203ENST00000553544 ARPC1AQ92747 370 aa9.06□□□□□ -0.96
SRP54-203ENST00000553544 HARBI1Q96MB7 349 aa9.06□□□□□ -0.96
SRP54-203ENST00000553544 KRTAP3-3Q9BYR6 98 aa9.06□□□□□ -0.96
SRP54-203ENST00000553544 KRTAP3-2Q9BYR7 98 aa9.06□□□□□ -0.96
SRP54-203ENST00000553544 AUNIPQ9H7T9 357 aa9.06□□□□□ -0.96
SRP54-203ENST00000553544 CCDC59Q9P031 241 aaKnown RBP9.06□□□□□ -0.96
SRP54-203ENST00000553544 IGKV1D-13A0A0B4J2D9 117 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 CCDC160A6NGH7 325 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 FAM25AB3EWG3 89 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 FAM25CB3EWG5 89 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 FAM25GB3EWG6 89 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 SULT1C2O00338 296 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 SHOXO15266 292 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 BRI3O95415 125 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 IGKV1-13P0DP09 117 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 PRSS3P35030 304 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 TAS2R46P59540 309 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 EIF4EBP1Q13541 118 aaPredicted RBP9.05□□□□□ -0.96
SRP54-203ENST00000553544 HAGHQ16775 308 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 RTL8BQ17RB0 113 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 ZNF645Q8N7E2 425 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 TEX45Q8NA69 505 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 BEST4Q8NFU0 473 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 ABHD5Q8WTS1 349 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 RHOVQ96L33 236 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 ELOVL1Q9BW60 279 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 ALX4Q9H161 411 aaPredicted RBP9.05□□□□□ -0.96
SRP54-203ENST00000553544 SLA2Q9H6Q3 261 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 SCPEP1Q9HB40 452 aa9.05□□□□□ -0.96
SRP54-203ENST00000553544 HYDINQ4G0P3 5121 aa9.04□□□□□ -0.96
SRP54-203ENST00000553544 H3BUA1 57 aa9.04□□□□□ -0.96
SRP54-203ENST00000553544 J3QRK9 145 aa9.04□□□□□ -0.96
SRP54-203ENST00000553544 LGALS1P09382 135 aaKnown RBP9.04□□□□□ -0.96
SRP54-203ENST00000553544 TAS2R20P59543 309 aa9.04□□□□□ -0.96
SRP54-203ENST00000553544 UBE2KP61086 200 aa9.04□□□□□ -0.96
SRP54-203ENST00000553544 RPL30P62888 115 aaKnown RBP9.04□□□□□ -0.96
SRP54-203ENST00000553544 HOGA1Q86XE5 327 aa9.04□□□□□ -0.96
SRP54-203ENST00000553544 GVQW1Q8N7I0 195 aa9.04□□□□□ -0.96
SRP54-203ENST00000553544 GRPEL2Q8TAA5 225 aa9.04□□□□□ -0.96
SRP54-203ENST00000553544 OSR1Q8TAX0 266 aaPredicted RBP9.04□□□□□ -0.96
SRP54-203ENST00000553544 TMEM68Q96MH6 324 aa9.04□□□□□ -0.96
SRP54-203ENST00000553544 NAA50Q9GZZ1 169 aaKnown RBP9.04□□□□□ -0.96
SRP54-203ENST00000553544 RBMX2Q9Y388 322 aaKnown RBP9.04□□□□□ -0.96
SRP54-203ENST00000553544 IGHV4OR15-8A0A075B7B6 117 aa9.03□□□□□ -0.96
SRP54-203ENST00000553544 A0A087WW49 117 aa9.03□□□□□ -0.96
SRP54-203ENST00000553544 RGS5O15539 181 aa9.03□□□□□ -0.96
SRP54-203ENST00000553544 CNIH1O95406 144 aa9.03□□□□□ -0.96
SRP54-203ENST00000553544 CRYZL1O95825 349 aa9.03□□□□□ -0.96
SRP54-203ENST00000553544 HSPB1P04792 205 aaKnown RBP9.03□□□□□ -0.96
SRP54-203ENST00000553544 CD40LGP29965 261 aa9.03□□□□□ -0.96
SRP54-203ENST00000553544 BRWD1-AS2P59051 145 aa9.03□□□□□ -0.96
SRP54-203ENST00000553544 MRPS10P82664 201 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 415.5 ms