RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	SIRPD	Q9H106	197 aa		10.3	□□□□□ -0.76
CACNB3-223	ENST00000552480	SIRT7	Q9NRC8	400 aa		10.3	□□□□□ -0.76
CACNB3-223	ENST00000552480	FBXL17	Q9UF56	701 aa		10.3	□□□□□ -0.76
CACNB3-223	ENST00000552480	CACFD1	Q9UGQ2	172 aa		10.3	□□□□□ -0.76
CACNB3-223	ENST00000552480	WASHC3	Q9Y3C0	194 aa		10.3	□□□□□ -0.76
CACNB3-223	ENST00000552480	WSB1	Q9Y6I7	421 aa		10.3	□□□□□ -0.76
CACNB3-223	ENST00000552480	IGHV4-61	A0A0C4DH41	118 aa		10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	LY6L	H3BQJ8	138 aa		10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480		H7C2Y5	167 aa		10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	RBMXL2	O75526	392 aa	Known RBP	10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	GAPDH	P04406	335 aa	Known RBP	10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	IGKV1-16	P04430	117 aa		10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	ARG1	P05089	322 aa		10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	IAPP	P10997	89 aa		10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	TPT1	P13693	172 aa	Known RBP	10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	EIF5A	P63241	154 aa	Known RBP	10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	PRB3	Q04118	309 aa	Predicted RBP	10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	BAX	Q07812	192 aa		10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	NDUFA5	Q16718	116 aa		10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	OR4A47	Q6IF82	309 aa		10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	HCP5	Q6MZN7	132 aa		10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	VKORC1L1	Q8N0U8	176 aa		10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	TMEM252	Q8N6L7	170 aa		10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	OR52E5	Q8NH55	327 aa		10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	SCARB1	Q8WTV0	552 aa		10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	LHX4	Q969G2	390 aa		10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	PHYHIPL	Q96FC7	376 aa		10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	QTRT1	Q9BXR0	403 aa	Known RBP	10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	PSENEN	Q9NZ42	101 aa		10.29	□□□□□ -0.76
CACNB3-223	ENST00000552480	IGHV4-30-2	A0A087WSY4	118 aa		10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	C15orf61	A6NNL5	157 aa		10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	FAM157A	C9JC47	383 aa		10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	SHOX	O15266	292 aa		10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	LY86	O95711	162 aa		10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	IL6R	P08887	468 aa	Predicted RBP	10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	HOXB4	P17483	251 aa	Predicted RBP	10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	HTR2B	P41595	481 aa		10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	DVL1P1	P54792	670 aa	Predicted RBP	10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	OR2B8P	P59922	312 aa		10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	KLRD1	Q13241	179 aa		10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	PDLIM3	Q53GG5	364 aa	Predicted RBP	10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	TPTE2P1	Q5T6R2	138 aa		10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	ZNF429	Q86V71	674 aa		10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	OR4C13	Q8NGP0	309 aa		10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	DTD1	Q8TEA8	209 aa		10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	RPE	Q96AT9	228 aa		10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	FLYWCH2	Q96CP2	140 aa	Known RBP	10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	BSCL2	Q96G97	398 aa	Predicted RBP	10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	HARBI1	Q96MB7	349 aa		10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	CIB3	Q96Q77	187 aa	Predicted RBP	10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	FOXA2	Q9Y261	457 aa	Predicted RBP	10.28	□□□□□ -0.76
CACNB3-223	ENST00000552480	USP9X	Q93008	2570 aa	Predicted RBP	10.27	□□□□□ -0.76
CACNB3-223	ENST00000552480	TRAV3	A0A0B4J244	114 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	IGHV1-3	A0A0C4DH29	117 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	SRRM4	A7MD48	611 aa	Known RBP	10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	CEBPZOS	A8MTT3	80 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	LEUTX	A8MZ59	168 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	UPK2	O00526	184 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	SLC25A16	P16260	332 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	HTR1D	P28221	377 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	CEACAM3	P40198	252 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	SULT1A1	P50225	295 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	SPCS3	P61009	180 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	NHLH2	Q02577	135 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	RPL7L1	Q6DKI1	246 aa	Known RBP	10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	ALKAL2	Q6UX46	152 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	STX12	Q86Y82	276 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	BAP18	Q8IXM2	172 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	PUSL1	Q8N0Z8	303 aa	Known RBP	10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	OR8H3	Q8N146	312 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	SMIM3	Q9BZL3	60 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	MMP26	Q9NRE1	261 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	BEX4	Q9NWD9	120 aa	Predicted RBP	10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	BET1L	Q9NYM9	111 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	DPM3	Q9P2X0	92 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	PRND	Q9UKY0	176 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	INSIG2	Q9Y5U4	225 aa		10.27	□□□□□ -0.77
CACNB3-223	ENST00000552480	MALRD1	Q5VYJ5	2156 aa		10.26	□□□□□ -0.77
CACNB3-223	ENST00000552480	BORCS7-ASMT	A0A0B4J1R7	106 aa		10.26	□□□□□ -0.77
CACNB3-223	ENST00000552480	RNASEK-C17orf49	H0YIS7	233 aa		10.26	□□□□□ -0.77
CACNB3-223	ENST00000552480	JTB	O76095	146 aa		10.26	□□□□□ -0.77
CACNB3-223	ENST00000552480	TOX4	O94842	621 aa		10.26	□□□□□ -0.77
CACNB3-223	ENST00000552480	IFNA17	P01571	189 aa		10.26	□□□□□ -0.77
CACNB3-223	ENST00000552480	SAA1	P0DJI8	122 aa	Predicted RBP	10.26	□□□□□ -0.77
CACNB3-223	ENST00000552480	RPS16	P62249	146 aa	Known RBP	10.26	□□□□□ -0.77
CACNB3-223	ENST00000552480	CLEC12B	Q2HXU8	276 aa		10.26	□□□□□ -0.77
CACNB3-223	ENST00000552480	CLEC9A	Q6UXN8	241 aa		10.26	□□□□□ -0.77
CACNB3-223	ENST00000552480	MOB3B	Q86TA1	216 aa		10.26	□□□□□ -0.77
CACNB3-223	ENST00000552480	OR4A5	Q8NH83	315 aa		10.26	□□□□□ -0.77
CACNB3-223	ENST00000552480	VSTM2A	Q8TAG5	236 aa		10.26	□□□□□ -0.77
CACNB3-223	ENST00000552480	TBX15	Q96SF7	602 aa		10.26	□□□□□ -0.77
CACNB3-223	ENST00000552480	MS4A7	Q9GZW8	240 aa	Predicted RBP	10.26	□□□□□ -0.77
CACNB3-223	ENST00000552480	WFDC1	Q9HC57	220 aa		10.26	□□□□□ -0.77
CACNB3-223	ENST00000552480	TMEM14B	Q9NUH8	114 aa		10.26	□□□□□ -0.77
CACNB3-223	ENST00000552480	ITGB1BP2	Q9UKP3	347 aa		10.26	□□□□□ -0.77
CACNB3-223	ENST00000552480	NUP50	Q9UKX7	468 aa		10.26	□□□□□ -0.77
CACNB3-223	ENST00000552480	DOCK11	Q5JSL3	2073 aa		10.26	□□□□□ -0.77
CACNB3-223	ENST00000552480		A0A1W2PPI3	338 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	OOSP1	A8MZH6	123 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480		H3BP45	60 aa		10.25	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms