RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 RHBDL1O75783 438 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 HLA-DQA1P01909 254 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 CA3P07451 260 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 OR9G9P0C7N8 305 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 FTH1P19P0C7X4 201 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 P0C879 139 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 COX8AP10176 69 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 AREGP15514 252 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 PGCP20142 388 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 GPR183P32249 361 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 PLA2G5P39877 138 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 CA7P43166 264 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 IER3P46695 156 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 CEBPDP49716 269 aaPredicted RBP4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 MEOX1P50221 254 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 SRSF2Q01130 221 aaKnown RBP4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 FOXE3Q13461 319 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 TNXAQ16473 311 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 MS4A18Q3C1V0 323 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 ZNF585BQ52M93 769 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 RNF44Q7L0R7 432 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 ERASQ7Z444 233 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 WDR5BQ86VZ2 330 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 MMD2Q8IY49 270 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 SUMF1Q8NBK3 374 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 OR2K2Q8NGT1 345 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 VSTM2AQ8TAG5 236 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 PP6455Q8WZ26 134 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 APOBEC3DQ96AK3 386 aaPredicted RBP4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 LYZL4Q96KX0 146 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 GPR82Q96P67 336 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 FAM103A1Q9BTL3 118 aaKnown RBP4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 CHRDL1Q9BU40 450 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 VN1R3Q9BXE9 311 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 SPANXB1Q9NS25 103 aaPredicted RBP4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 BOKQ9UMX3 212 aaPredicted RBP4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 UBE2J1Q9Y385 318 aaPredicted RBP4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 TNFRSF18Q9Y5U5 241 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 HS3ST3A1Q9Y663 406 aa4.4□□□□□ -1.71
LSM3P2-201ENST00000551246 DOCK3Q8IZD9 2030 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 TRBV6-6A0A0A6YYG2 114 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 TEX48A0A1B0GUV7 120 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 SPAARA0A1B0GVQ0 90 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 A0A1W2PQD3 144 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 ZNF850A8MQ14 1090 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 C21orf140B9A014 251 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 E9PLN8 166 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 SIVA1O15304 175 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 SYNGR2O43760 224 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 SLC25A17O43808 307 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 PGLYRP1O75594 196 aaPredicted RBP4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 OR7C1O76099 320 aaPredicted RBP4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 NDUFB4O95168 129 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 IGKV1-39P01597 117 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 HBZP02008 142 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 IGKV1D-39P04432 117 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 AMY1AP04745 511 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 CISD3P0C7P0 127 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 CCL2P13500 99 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 PMCHP20382 165 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 DRD1P21728 446 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 GUCA1AP43080 201 aaPredicted RBP4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 ATP5G3P48201 142 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 HBG1P69891 147 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 HBG2P69892 147 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 CD69Q07108 199 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 PLCXD2Q0VAA5 305 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 GPM6BQ13491 265 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 HNRNPA1L2Q32P51 320 aaKnown RBP4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 KIAA1644Q3SXP7 199 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 DEFB134Q4QY38 66 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 TMEM97Q5BJF2 176 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 PLCXD3Q63HM9 321 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 TMEM42Q69YG0 159 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 FIGLAQ6QHK4 219 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 FOXL2NBQ6ZUU3 175 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 TCEAL8Q8IYN2 117 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 BOD1L2Q8IYS8 172 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 FAM58AQ8N1B3 248 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 KIR3DL3Q8N743 410 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 C1orf162Q8NEQ5 155 aaPredicted RBP4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 OR10G7Q8NGN6 311 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 CT55Q8WUE5 264 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 BORCS7Q96B45 105 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 RAX2Q96IS3 184 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 CCDC3Q9BQI4 270 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 DERL1Q9BUN8 251 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 TMEM147Q9BVK8 224 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 GTSF1LQ9H1H1 148 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 TMEM133Q9H2Q1 129 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 GEMIN7Q9H840 131 aaKnown RBP4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 TNFRSF19Q9NS68 423 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 TECRQ9NZ01 308 aaKnown RBP4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 PSENENQ9NZ42 101 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 JKAMPQ9P055 326 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 COPS7AQ9UBW8 275 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 OR2W1Q9Y3N9 320 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 LINC00312Q9Y6C7 94 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 WNT6Q9Y6F9 365 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 ARL2-SNX15V9GYD0 113 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms