RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 CRYGBP07316 175 aa12.8□□□□□ -0.36
CHMP1A-209ENST00000550872 PI3P19957 117 aa12.8□□□□□ -0.36
CHMP1A-209ENST00000550872 F2RP25116 425 aa12.8□□□□□ -0.36
CHMP1A-209ENST00000550872 ECI1P42126 302 aa12.8□□□□□ -0.36
CHMP1A-209ENST00000550872 UBE2KP61086 200 aa12.8□□□□□ -0.36
CHMP1A-209ENST00000550872 BAK1Q16611 211 aa12.8□□□□□ -0.36
CHMP1A-209ENST00000550872 IDO2Q6ZQW0 420 aa12.8□□□□□ -0.36
CHMP1A-209ENST00000550872 TBC1D26Q86UD7 250 aa12.8□□□□□ -0.36
CHMP1A-209ENST00000550872 PPP1R27Q86WC6 154 aa12.8□□□□□ -0.36
CHMP1A-209ENST00000550872 STPG2Q8N412 459 aa12.8□□□□□ -0.36
CHMP1A-209ENST00000550872 TEX45Q8NA69 505 aa12.8□□□□□ -0.36
CHMP1A-209ENST00000550872 OR5AU1Q8NGC0 362 aa12.8□□□□□ -0.36
CHMP1A-209ENST00000550872 OR13C8Q8NGS7 320 aa12.8□□□□□ -0.36
CHMP1A-209ENST00000550872 ZNF486Q96H40 463 aaPredicted RBP12.8□□□□□ -0.36
CHMP1A-209ENST00000550872 SDHCQ99643 169 aaPredicted RBP12.8□□□□□ -0.36
CHMP1A-209ENST00000550872 CITED1Q99966 193 aa12.8□□□□□ -0.36
CHMP1A-209ENST00000550872 PARP11Q9NR21 331 aa12.8□□□□□ -0.36
CHMP1A-209ENST00000550872 SLC2A9Q9NRM0 540 aa12.8□□□□□ -0.36
CHMP1A-209ENST00000550872 TNCP24821 2201 aa12.8□□□□□ -0.36
CHMP1A-209ENST00000550872 TENM1Q9UKZ4 2725 aa12.79□□□□□ -0.36
CHMP1A-209ENST00000550872 PSMB11A5LHX3 300 aa12.79□□□□□ -0.36
CHMP1A-209ENST00000550872 HPRT1P00492 218 aa12.79□□□□□ -0.36
CHMP1A-209ENST00000550872 CA2P00918 260 aa12.79□□□□□ -0.36
CHMP1A-209ENST00000550872 SAA1P0DJI8 122 aaPredicted RBP12.79□□□□□ -0.36
CHMP1A-209ENST00000550872 LPAR6P43657 344 aa12.79□□□□□ -0.36
CHMP1A-209ENST00000550872 RND3P61587 244 aa12.79□□□□□ -0.36
CHMP1A-209ENST00000550872 SSX9Q7RTT3 188 aa12.79□□□□□ -0.36
CHMP1A-209ENST00000550872 VKORC1L1Q8N0U8 176 aa12.79□□□□□ -0.36
CHMP1A-209ENST00000550872 ABHD5Q8WTS1 349 aa12.79□□□□□ -0.36
CHMP1A-209ENST00000550872 MRGPRFQ96AM1 343 aa12.79□□□□□ -0.36
CHMP1A-209ENST00000550872 AIFM2Q9BRQ8 373 aa12.79□□□□□ -0.36
CHMP1A-209ENST00000550872 AKIP1Q9NQ31 210 aa12.79□□□□□ -0.36
CHMP1A-209ENST00000550872 SLC2A8Q9NY64 477 aa12.79□□□□□ -0.36
CHMP1A-209ENST00000550872 COPZ2Q9P299 210 aa12.79□□□□□ -0.36
CHMP1A-209ENST00000550872 C14orf166Q9Y224 244 aaKnown RBP12.79□□□□□ -0.36
CHMP1A-209ENST00000550872 ATP6V0E1O15342 81 aa12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 MPPED1O15442 326 aa12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 FBXO24O75426 580 aa12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 CNIH1O95406 144 aa12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 CTSDP07339 412 aaPredicted RBP12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 PIGPP57054 158 aa12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 GNB1P62873 340 aa12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 SLC35B1P78383 322 aa12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 PJVKQ0ZLH3 352 aa12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 FXYD3Q14802 87 aa12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 SURF2Q15527 256 aaPredicted RBP12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 C10orf99Q6UWK7 81 aa12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 ZNF562Q6V9R5 426 aa12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 ZNF329Q86UD4 541 aa12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 TCTEX1D1Q8N7M0 179 aa12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 CCDC71LQ8N9Z2 235 aa12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 WIPF2Q8TF74 440 aaPredicted RBP12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 DEDD2Q8WXF8 326 aa12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 S100ZQ8WXG8 99 aa12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 RHOVQ96L33 236 aa12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 GON7Q9BXV9 100 aa12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 PLEKHA2Q9HB19 425 aa12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 WSB1Q9Y6I7 421 aa12.78□□□□□ -0.36
CHMP1A-209ENST00000550872 LINC00854A0A1B0GVQ3 168 aa12.77□□□□□ -0.37
CHMP1A-209ENST00000550872 OR2A4O95047 310 aa12.77□□□□□ -0.37
CHMP1A-209ENST00000550872 S1PR2O95136 353 aa12.77□□□□□ -0.37
CHMP1A-209ENST00000550872 IGF1P05019 195 aa12.77□□□□□ -0.37
CHMP1A-209ENST00000550872 CD28P10747 220 aa12.77□□□□□ -0.37
CHMP1A-209ENST00000550872 IL7P13232 177 aa12.77□□□□□ -0.37
CHMP1A-209ENST00000550872 NQO2P16083 231 aa12.77□□□□□ -0.37
CHMP1A-209ENST00000550872 VDAC1P21796 283 aa12.77□□□□□ -0.37
CHMP1A-209ENST00000550872 TAS2R31P59538 309 aa12.77□□□□□ -0.37
CHMP1A-209ENST00000550872 NDPQ00604 133 aa12.77□□□□□ -0.37
CHMP1A-209ENST00000550872 PRSS8Q16651 343 aa12.77□□□□□ -0.37
CHMP1A-209ENST00000550872 HIST2H2BDQ6DRA6 164 aa12.77□□□□□ -0.37
CHMP1A-209ENST00000550872 OR4X2Q8NGF9 303 aa12.77□□□□□ -0.37
CHMP1A-209ENST00000550872 VSTM2AQ8TAG5 236 aa12.77□□□□□ -0.37
CHMP1A-209ENST00000550872 SCGB3A2Q96PL1 93 aa12.77□□□□□ -0.37
CHMP1A-209ENST00000550872 OR2A7Q96R45 310 aa12.77□□□□□ -0.37
CHMP1A-209ENST00000550872 GPR132Q9UNW8 380 aa12.77□□□□□ -0.37
CHMP1A-209ENST00000550872 TRAV41A0A0B4J266 112 aa12.76□□□□□ -0.37
CHMP1A-209ENST00000550872 ARPC1BO15143 372 aaKnown RBP12.76□□□□□ -0.37
CHMP1A-209ENST00000550872 CREBL2O60519 120 aaPredicted RBP12.76□□□□□ -0.37
CHMP1A-209ENST00000550872 TNXAQ16473 311 aa12.76□□□□□ -0.37
CHMP1A-209ENST00000550872 ZNF585BQ52M93 769 aa12.76□□□□□ -0.37
CHMP1A-209ENST00000550872 PUSL1Q8N0Z8 303 aaKnown RBP12.76□□□□□ -0.37
CHMP1A-209ENST00000550872 GRPEL2Q8TAA5 225 aa12.76□□□□□ -0.37
CHMP1A-209ENST00000550872 ARPC1AQ92747 370 aa12.76□□□□□ -0.37
CHMP1A-209ENST00000550872 R3HDM4Q96D70 268 aa12.76□□□□□ -0.37
CHMP1A-209ENST00000550872 RTBDNQ9BSG5 229 aaPredicted RBP12.76□□□□□ -0.37
CHMP1A-209ENST00000550872 FAM103A1Q9BTL3 118 aaKnown RBP12.76□□□□□ -0.37
CHMP1A-209ENST00000550872 COMMD9Q9P000 198 aa12.76□□□□□ -0.37
CHMP1A-209ENST00000550872 ZNF580Q9UK33 172 aa12.76□□□□□ -0.37
CHMP1A-209ENST00000550872 FBXO7Q9Y3I1 522 aa12.76□□□□□ -0.37
CHMP1A-209ENST00000550872 G3V318 75 aa12.75□□□□□ -0.37
CHMP1A-209ENST00000550872 ACTL6BO94805 426 aa12.75□□□□□ -0.37
CHMP1A-209ENST00000550872 EGR2P11161 476 aaPredicted RBP12.75□□□□□ -0.37
CHMP1A-209ENST00000550872 RPA2P15927 270 aa12.75□□□□□ -0.37
CHMP1A-209ENST00000550872 ERVK-16P61578 105 aa12.75□□□□□ -0.37
CHMP1A-209ENST00000550872 TMEM267Q0VDI3 215 aaPredicted RBP12.75□□□□□ -0.37
CHMP1A-209ENST00000550872 ECSCRQ19T08 205 aa12.75□□□□□ -0.37
CHMP1A-209ENST00000550872 MRGPRG-AS1Q2M3A8 158 aa12.75□□□□□ -0.37
CHMP1A-209ENST00000550872 MMD2Q8IY49 270 aa12.75□□□□□ -0.37
CHMP1A-209ENST00000550872 DMBX1Q8NFW5 382 aa12.75□□□□□ -0.37
CHMP1A-209ENST00000550872 TMEM167AQ8TBQ9 72 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms