RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 IL6P05231 212 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 CALB1P05937 261 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 CD5P06127 495 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 MPV17P39210 176 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 SLCO1A2P46721 670 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 DNASE1L1P49184 302 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 FLOT2Q14254 428 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 MAD2L1BPQ15013 274 aaPredicted RBP2.62□□□□□ -1.99
LIMA1-205ENST00000550592 RGS21Q2M5E4 152 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 SP6Q3SY56 376 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 CCDC58Q4VC31 144 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 C6orf183Q5T699 404 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 PTRHD1Q6GMV3 140 aaKnown RBP2.62□□□□□ -1.99
LIMA1-205ENST00000550592 IDO2Q6ZQW0 420 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 TRMT10CQ7L0Y3 403 aaKnown RBP2.62□□□□□ -1.99
LIMA1-205ENST00000550592 LRRC34Q8IZ02 419 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 MUC15Q8N387 334 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 TBC1D19Q8N5T2 526 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 NATD1Q8N6N6 113 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 SIGLECL1Q8N7X8 197 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 CNEP1R1Q8N9A8 125 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 OR52N1Q8NH53 320 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 CLHC1Q8NHS4 586 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 C20orf144Q9BQM9 153 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 LLPHQ9BRT6 129 aaKnown RBP2.62□□□□□ -1.99
LIMA1-205ENST00000550592 FRMD8P1Q9BZ68 369 aaPredicted RBP2.62□□□□□ -1.99
LIMA1-205ENST00000550592 BPESC1Q9GZL8 116 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 LINC00574Q9H8X3 128 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 INIPQ9NRY2 104 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 PARVAQ9NVD7 372 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 BOKQ9UMX3 212 aaPredicted RBP2.62□□□□□ -1.99
LIMA1-205ENST00000550592 AP3M1Q9Y2T2 418 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 COQ4Q9Y3A0 265 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 V9GYY9 64 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 LOC102724200A0A096LPH7 203 aaPredicted RBP2.61□□□□□ -1.99
LIMA1-205ENST00000550592 TMEM72A0PK05 275 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 CEACAM18A8MTB9 384 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 C16orf90A8MZG2 172 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 MIF4GDA9UHW6 222 aaKnown RBP2.61□□□□□ -1.99
LIMA1-205ENST00000550592 ZNF879B4DU55 563 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 SEC14L6B5MCN3 397 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 NDUFS5O43920 106 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 OR2J2O76002 312 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 ATP6V1G2O95670 118 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 CD28P10747 220 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 KRTAP10-10P60014 251 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 RAB4BP61018 213 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 MAXP61244 160 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 GRB2P62993 217 aaKnown RBP2.61□□□□□ -1.99
LIMA1-205ENST00000550592 RELAQ04206 551 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 BTN1A1Q13410 526 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 FAM53BQ14153 422 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 TOMM34Q15785 309 aaPredicted RBP2.61□□□□□ -1.99
LIMA1-205ENST00000550592 TAL2Q16559 108 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 NDUFAF6Q330K2 333 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 TTC32Q5I0X7 151 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 MED27Q6P2C8 311 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 PID1Q7Z2X4 250 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 CA13Q8N1Q1 262 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 LRRC25Q8N386 305 aaPredicted RBP2.61□□□□□ -1.99
LIMA1-205ENST00000550592 ZNF680Q8NEM1 530 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 OR6N2Q8NGY6 317 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 OR51Q1Q8NH59 317 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 NDNFQ8TB73 568 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 UGT2B28Q9BY64 529 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 SYT4Q9H2B2 425 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 ANKHQ9HCJ1 492 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 PYCARDQ9ULZ3 195 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 USH1CQ9Y6N9 552 aa2.61□□□□□ -1.99
LIMA1-205ENST00000550592 FAM240AA0A1B0GVK7 77 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 H0YGG7 62 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 PRMT5O14744 637 aaPredicted RBP2.6□□□□□ -1.99
LIMA1-205ENST00000550592 NOS1APO75052 506 aaPredicted RBP2.6□□□□□ -1.99
LIMA1-205ENST00000550592 LY6HO94772 140 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 VAPBO95292 243 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 MSMBP08118 114 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 SDC4P31431 198 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 MPIP34949 423 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 ARR3P36575 388 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 IDH2P48735 452 aaKnown RBP2.6□□□□□ -1.99
LIMA1-205ENST00000550592 EIF2B2P49770 351 aaKnown RBP2.6□□□□□ -1.99
LIMA1-205ENST00000550592 GNG2P59768 71 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 TPI1P60174 286 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 HPCAP84074 193 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 SLC9A3R2Q15599 337 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 CDNFQ49AH0 187 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 SAPCD1Q5SSQ6 148 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 ZFAND6Q6FIF0 208 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 CACNG8Q8WXS5 425 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 ZNF649Q9BS31 505 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 TBL1XR1Q9BZK7 514 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 OR52A5Q9H2C5 316 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 SPACA1Q9HBV2 294 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 STX18Q9P2W9 335 aaKnown RBP2.6□□□□□ -1.99
LIMA1-205ENST00000550592 DNAJC12Q9UKB3 198 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 ACOT9Q9Y305 439 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 HEY1Q9Y5J3 304 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 ENPP4Q9Y6X5 453 aa2.6□□□□□ -1.99
LIMA1-205ENST00000550592 OBSCNQ5VST9 7968 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 HERC1Q15751 4861 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms