RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 TRBV24-1A0A075B6N3 115 aa13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 TRAV17A0A0B4J275 112 aa13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 OR10AG1Q8NH19 301 aa13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 SSBP3Q9BWW4 388 aaPredicted RBP13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 NPCDR1Q9BY65 106 aa13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 FSCN3Q9NQT6 498 aa13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 SERF1AO75920 110 aa13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 MST1P26927 711 aa13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 PRDX2P32119 198 aa13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 C3AR1Q16581 482 aa13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 DRAM1Q8N682 238 aa13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 ARL6IP6Q8N6S5 226 aa13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 AMBPP02760 352 aa13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 TMEM177Q53S58 311 aa13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 PKIBQ9C010 78 aa13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 CLEC1BQ9P126 229 aa13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 CLDN16Q9Y5I7 305 aa13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 SBF1O95248 1867 aa13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 MAGEA5P43359 124 aa13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 FBXW9Q5XUX1 488 aa13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 ZNF501Q96CX3 271 aaPredicted RBP13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 SPOCK3Q9BQ16 436 aa13.51□□□□□ -0.25
RBFOX1-212ENST00000550418 GPR179Q6PRD1 2367 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 IGKV1D-43A0A0B4J1Z2 117 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 COX7A1P24310 79 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 HSPE1P61604 102 aaKnown RBP13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 PLSCR2Q9NRY7 297 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 A0A1B0GV72 72 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 MGST3O14880 152 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 PLAUP00749 431 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 CA7P43166 264 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 CRIPAKQ8N1N5 446 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 RND1Q92730 232 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 ANKRD36A6QL64 1941 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 LOC107984156A0A0G2JMH3 177 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 TMEM238LA0A1B0GVL6 79 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 A6NJY4 79 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 LYPD3O95274 346 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 LIPFP07098 398 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 KIR2DL2P43627 348 aaPredicted RBP13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 ZNF658BQ4V348 819 aaPredicted RBP13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 ARL17AQ8IVW1 177 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 GLRX2Q9NS18 164 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 HIGD1AQ9Y241 93 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 ZIC3O60481 467 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 SSTR5P35346 364 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 SAPCD1Q5SSQ6 148 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 ABHD12Q8N2K0 398 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 ZNF525Q8N782 197 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 CLEC5AQ9NY25 188 aa13.5□□□□□ -0.25
RBFOX1-212ENST00000550418 TRAV9-1A0A075B6T8 112 aa13.49□□□□□ -0.25
RBFOX1-212ENST00000550418 CKS2P33552 79 aa13.49□□□□□ -0.25
RBFOX1-212ENST00000550418 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.49□□□□□ -0.25
RBFOX1-212ENST00000550418 RNF7Q9UBF6 113 aa13.49□□□□□ -0.25
RBFOX1-212ENST00000550418 IGHV4-34P06331 123 aa13.49□□□□□ -0.25
RBFOX1-212ENST00000550418 DLX1P56177 255 aa13.49□□□□□ -0.25
RBFOX1-212ENST00000550418 HOXA4Q00056 320 aaPredicted RBP13.49□□□□□ -0.25
RBFOX1-212ENST00000550418 RIPPLY2Q5TAB7 128 aa13.49□□□□□ -0.25
RBFOX1-212ENST00000550418 NABP2Q9BQ15 211 aa13.49□□□□□ -0.25
RBFOX1-212ENST00000550418 SFXN3Q9BWM7 321 aa13.49□□□□□ -0.25
RBFOX1-212ENST00000550418 NRN1Q9NPD7 142 aa13.49□□□□□ -0.25
RBFOX1-212ENST00000550418 TMEM74BQ9NUR3 256 aa13.49□□□□□ -0.25
RBFOX1-212ENST00000550418 TMEM242Q9NWH2 141 aa13.49□□□□□ -0.25
RBFOX1-212ENST00000550418 TCF19Q9Y242 345 aa13.49□□□□□ -0.25
RBFOX1-212ENST00000550418 ZNHIT1O43257 154 aa13.49□□□□□ -0.25
RBFOX1-212ENST00000550418 IGKV3-11P04433 115 aa13.49□□□□□ -0.25
RBFOX1-212ENST00000550418 PAQR4Q8N4S7 273 aaPredicted RBP13.49□□□□□ -0.25
RBFOX1-212ENST00000550418 TCFL5Q9UL49 500 aa13.49□□□□□ -0.25
RBFOX1-212ENST00000550418 FOXA3P55318 350 aaPredicted RBP13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 DNLZQ5SXM8 178 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 INO80CQ6PI98 192 aaPredicted RBP13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 BEND2Q8NDZ0 799 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 SDK2Q58EX2 2172 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 ADCYAP1P18509 176 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 STPG3Q8N7X2 389 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 C2orf88Q9BSF0 95 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 WFDC1Q9HC57 220 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 ZNF236Q9UL36 1845 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 TMEM56-RWDD3S4R434 201 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 ZNF716A6NP11 495 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 ATP5G3P48201 142 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 C10orf128Q5T292 105 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 FAM19A2Q8N3H0 131 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 C19orf24Q9BVV8 132 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 PRDM14Q9GZV8 571 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 WDR54Q9H977 334 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 HSPB7Q9UBY9 170 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 DLEU1O43261 78 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 MTURNQ8N3F0 131 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 C18orf12Q96KH6 178 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 ONECUT1Q9UBC0 465 aa13.48□□□□□ -0.25
RBFOX1-212ENST00000550418 TMEM189A5PLL7 270 aa13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 CCL4P13236 92 aa13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 MPV17P39210 176 aa13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 ZNF324BQ6AW86 544 aaPredicted RBP13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 SLC22A18ASQ8N1D0 253 aa13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 F11RQ9Y624 299 aaKnown RBP13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 ZNF318Q5VUA4 2279 aa13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 IGHV3-21A0A0B4J1V1 117 aa13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 A1L4Q6 167 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms