RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 CT45A5P0DMU8 189 aa17.16■□□□□ 0.34
PRDM4-205ENST00000550376 CT45A7P0DMV0 189 aa17.16■□□□□ 0.34
PRDM4-205ENST00000550376 OPN1MW2P0DN77 364 aa17.16■□□□□ 0.34
PRDM4-205ENST00000550376 OPN1MW3P0DN78 364 aa17.16■□□□□ 0.34
PRDM4-205ENST00000550376 SLC38A11Q08AI6 406 aa17.16■□□□□ 0.34
PRDM4-205ENST00000550376 SLC25A48Q6ZT89 311 aaKnown RBP17.16■□□□□ 0.34
PRDM4-205ENST00000550376 TCTEX1D1Q8N7M0 179 aa17.16■□□□□ 0.34
PRDM4-205ENST00000550376 OR4A16Q8NH70 328 aa17.16■□□□□ 0.34
PRDM4-205ENST00000550376 LINC00574Q9H8X3 128 aa17.16■□□□□ 0.34
PRDM4-205ENST00000550376 ARHGAP32A7KAX9 2087 aa17.16■□□□□ 0.34
PRDM4-205ENST00000550376 UTP20O75691 2785 aaKnown RBP17.16■□□□□ 0.34
PRDM4-205ENST00000550376 SNCAP37840 140 aa17.15■□□□□ 0.34
PRDM4-205ENST00000550376 TMEM14EPQ6UXP3 125 aa17.15■□□□□ 0.34
PRDM4-205ENST00000550376 RHOVQ96L33 236 aa17.15■□□□□ 0.34
PRDM4-205ENST00000550376 EIF5A2Q9GZV4 153 aaKnown RBP17.15■□□□□ 0.34
PRDM4-205ENST00000550376 LAMP3Q9UQV4 416 aa17.15■□□□□ 0.34
PRDM4-205ENST00000550376 TET2Q6N021 2002 aaPredicted RBP17.15■□□□□ 0.34
PRDM4-205ENST00000550376 SFTA3P0C7M3 94 aa17.15■□□□□ 0.34
PRDM4-205ENST00000550376 TAS2R30P59541 319 aa17.15■□□□□ 0.34
PRDM4-205ENST00000550376 RARRES2Q99969 163 aa17.15■□□□□ 0.34
PRDM4-205ENST00000550376 GAL3ST2Q9H3Q3 398 aa17.15■□□□□ 0.34
PRDM4-205ENST00000550376 VPS13CQ709C8 3753 aa17.14■□□□□ 0.33
PRDM4-205ENST00000550376 DFFBO76075 338 aa17.14■□□□□ 0.33
PRDM4-205ENST00000550376 SOD3P08294 240 aa17.14■□□□□ 0.33
PRDM4-205ENST00000550376 NQO2P16083 231 aa17.14■□□□□ 0.33
PRDM4-205ENST00000550376 GNLYP22749 145 aa17.14■□□□□ 0.33
PRDM4-205ENST00000550376 PPT1P50897 306 aa17.14■□□□□ 0.33
PRDM4-205ENST00000550376 PUSL1Q8N0Z8 303 aaKnown RBP17.14■□□□□ 0.33
PRDM4-205ENST00000550376 SCGB1C1Q8TD33 95 aa17.14■□□□□ 0.33
PRDM4-205ENST00000550376 SRRM4A7MD48 611 aaKnown RBP17.14■□□□□ 0.33
PRDM4-205ENST00000550376 ERVK-16P61578 105 aa17.14■□□□□ 0.33
PRDM4-205ENST00000550376 HBG1P69891 147 aa17.14■□□□□ 0.33
PRDM4-205ENST00000550376 HBG2P69892 147 aa17.14■□□□□ 0.33
PRDM4-205ENST00000550376 RELBQ01201 579 aa17.14■□□□□ 0.33
PRDM4-205ENST00000550376 RAB9BQ9NP90 201 aa17.14■□□□□ 0.33
PRDM4-205ENST00000550376 STRAPQ9Y3F4 350 aaKnown RBP17.14■□□□□ 0.33
PRDM4-205ENST00000550376 A0A1W2PPR1 153 aa17.13■□□□□ 0.33
PRDM4-205ENST00000550376 CD5P06127 495 aa17.13■□□□□ 0.33
PRDM4-205ENST00000550376 HEPN1Q6WQI6 88 aa17.13■□□□□ 0.33
PRDM4-205ENST00000550376 SFT2D1Q8WV19 159 aa17.13■□□□□ 0.33
PRDM4-205ENST00000550376 FAM74A7A6NL05 159 aa17.13■□□□□ 0.33
PRDM4-205ENST00000550376 ELLP55199 621 aaPredicted RBP17.13■□□□□ 0.33
PRDM4-205ENST00000550376 MEF2CQ06413 473 aaPredicted RBP17.13■□□□□ 0.33
PRDM4-205ENST00000550376 FAM74A3Q4VXF1 159 aa17.13■□□□□ 0.33
PRDM4-205ENST00000550376 AKR1C8PQ5T2L2 129 aa17.13■□□□□ 0.33
PRDM4-205ENST00000550376 ABHD12Q8N2K0 398 aa17.13■□□□□ 0.33
PRDM4-205ENST00000550376 OR4S2Q8NH73 311 aa17.13■□□□□ 0.33
PRDM4-205ENST00000550376 GNPNAT1Q96EK6 184 aaPredicted RBP17.13■□□□□ 0.33
PRDM4-205ENST00000550376 SCRT1Q9BWW7 348 aa17.13■□□□□ 0.33
PRDM4-205ENST00000550376 GUK1Q16774 197 aa17.12■□□□□ 0.33
PRDM4-205ENST00000550376 OR4A47Q6IF82 309 aa17.12■□□□□ 0.33
PRDM4-205ENST00000550376 HINT2Q9BX68 163 aa17.12■□□□□ 0.33
PRDM4-205ENST00000550376 MRPL20Q9BYC9 149 aaKnown RBP17.12■□□□□ 0.33
PRDM4-205ENST00000550376 PMS2P5A8MQ11 134 aa17.12■□□□□ 0.33
PRDM4-205ENST00000550376 TSPAN4O14817 238 aa17.12■□□□□ 0.33
PRDM4-205ENST00000550376 RAB5CP51148 216 aa17.12■□□□□ 0.33
PRDM4-205ENST00000550376 RPRMQ9NS64 109 aa17.12■□□□□ 0.33
PRDM4-205ENST00000550376 NUDT19A8MXV4 375 aa17.11■□□□□ 0.33
PRDM4-205ENST00000550376 ITGB1BP1O14713 200 aa17.11■□□□□ 0.33
PRDM4-205ENST00000550376 LRRC75BQ2VPJ9 315 aa17.11■□□□□ 0.33
PRDM4-205ENST00000550376 AKIRIN2Q53H80 203 aa17.11■□□□□ 0.33
PRDM4-205ENST00000550376 TMEM88Q6PEY1 159 aa17.11■□□□□ 0.33
PRDM4-205ENST00000550376 SPSB3Q6PJ21 355 aa17.11■□□□□ 0.33
PRDM4-205ENST00000550376 H2AFB1P0C5Y9 115 aa17.11■□□□□ 0.33
PRDM4-205ENST00000550376 THBS3P49746 956 aa17.11■□□□□ 0.33
PRDM4-205ENST00000550376 DVL1P1P54792 670 aaPredicted RBP17.11■□□□□ 0.33
PRDM4-205ENST00000550376 WDR61Q9GZS3 305 aaKnown RBP17.11■□□□□ 0.33
PRDM4-205ENST00000550376 FAM157AC9JC47 383 aa17.1■□□□□ 0.33
PRDM4-205ENST00000550376 RRHO14718 337 aa17.1■□□□□ 0.33
PRDM4-205ENST00000550376 RBFOX2O43251 390 aaKnown RBP eCLIP17.1■□□□□ 0.33
PRDM4-205ENST00000550376 SSX7Q7RTT5 188 aa17.1■□□□□ 0.33
PRDM4-205ENST00000550376 TMEM204Q9BSN7 226 aa17.1■□□□□ 0.33
PRDM4-205ENST00000550376 NKX6-2Q9C056 277 aaPredicted RBP17.1■□□□□ 0.33
PRDM4-205ENST00000550376 HEYLQ9NQ87 328 aaPredicted RBP17.1■□□□□ 0.33
PRDM4-205ENST00000550376 C15orf62A8K5M9 175 aa17.1■□□□□ 0.33
PRDM4-205ENST00000550376 H7C2Y5 167 aa17.1■□□□□ 0.33
PRDM4-205ENST00000550376 TRIM77I1YAP6 450 aa17.1■□□□□ 0.33
PRDM4-205ENST00000550376 IFNA10P01566 189 aa17.1■□□□□ 0.33
PRDM4-205ENST00000550376 DAOP14920 347 aa17.1■□□□□ 0.33
PRDM4-205ENST00000550376 FGF8P55075 233 aaPredicted RBP17.1■□□□□ 0.33
PRDM4-205ENST00000550376 HAGHQ16775 308 aa17.1■□□□□ 0.33
PRDM4-205ENST00000550376 OR13D1Q8NGV5 346 aa17.1■□□□□ 0.33
PRDM4-205ENST00000550376 OR10X1Q8NGY0 326 aa17.1■□□□□ 0.33
PRDM4-205ENST00000550376 SLC35D1Q9NTN3 355 aa17.1■□□□□ 0.33
PRDM4-205ENST00000550376 GAB2Q9UQC2 676 aa17.1■□□□□ 0.33
PRDM4-205ENST00000550376 CRYBG3Q68DQ2 2970 aa17.09■□□□□ 0.33
PRDM4-205ENST00000550376 DEFA4P12838 97 aa17.09■□□□□ 0.33
PRDM4-205ENST00000550376 NPBWR1P48145 328 aa17.09■□□□□ 0.33
PRDM4-205ENST00000550376 IQCF2Q8IXL9 164 aa17.09■□□□□ 0.33
PRDM4-205ENST00000550376 C11orf42Q8N5U0 333 aa17.09■□□□□ 0.33
PRDM4-205ENST00000550376 OR10P1Q8NGE3 313 aa17.09■□□□□ 0.33
PRDM4-205ENST00000550376 UMAD1C9J7I0 102 aa17.09■□□□□ 0.33
PRDM4-205ENST00000550376 HMGB3O15347 200 aaKnown RBP17.09■□□□□ 0.33
PRDM4-205ENST00000550376 FBP1P09467 338 aa17.09■□□□□ 0.33
PRDM4-205ENST00000550376 LCN15Q6UWW0 184 aa17.09■□□□□ 0.33
PRDM4-205ENST00000550376 ETV3LQ6ZN32 361 aa17.09■□□□□ 0.33
PRDM4-205ENST00000550376 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.09■□□□□ 0.33
PRDM4-205ENST00000550376 TAF15Q92804 592 aaKnown RBP eCLIP17.09■□□□□ 0.33
PRDM4-205ENST00000550376 KAAG1Q9UBP8 84 aa17.09■□□□□ 0.33
PRDM4-205ENST00000550376 DLX6P56179 175 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms