RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 CRB1P82279 1406 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 ROCK1Q13464 1354 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 PTPRJQ12913 1337 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 ZNF532Q9HCE3 1301 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 IGSF23A1L1A6 192 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 INMT-MINDY4F8WBC2 141 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 COX7A2LO14548 114 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 NOS1APO75052 506 aaPredicted RBP1.52□□□□□ -2.17
CCDC38-208ENST00000549876 NDUFB2O95178 105 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 TTRP02766 147 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 CST2P09228 141 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 OR4E1P0C645 316 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 ESDP10768 282 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 HIST1H1TP22492 207 aaPredicted RBP1.52□□□□□ -2.17
CCDC38-208ENST00000549876 MSNP26038 577 aaKnown RBP1.52□□□□□ -2.17
CCDC38-208ENST00000549876 ZNF140P52738 457 aaPredicted RBP1.52□□□□□ -2.17
CCDC38-208ENST00000549876 TMEM42Q69YG0 159 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 AMMECR1LQ6DCA0 310 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 TMED4Q7Z7H5 227 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 OR6V1Q8N148 313 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 UMODL1-AS1Q8N2C9 162 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 SLC22A24Q8N4F4 322 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 EIF4E3Q8N5X7 224 aaKnown RBP1.52□□□□□ -2.17
CCDC38-208ENST00000549876 PXT1Q8NFP0 134 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 OR4K13Q8NH42 304 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 MUC7Q8TAX7 377 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 AP3S1Q92572 193 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 BORCS7Q96B45 105 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 C12orf43Q96C57 262 aaKnown RBP1.52□□□□□ -2.17
CCDC38-208ENST00000549876 TVP23CQ96ET8 276 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 SFRP2Q96HF1 295 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 BTF3L4Q96K17 158 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 CNBD2Q96M20 576 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 MND1Q9BWT6 205 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 SMDT1Q9H4I9 107 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 FAM96AQ9H5X1 160 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 GPR84Q9NQS5 396 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 MRPL27Q9P0M9 148 aaKnown RBP1.52□□□□□ -2.17
CCDC38-208ENST00000549876 DOK5Q9P104 306 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 SNX12Q9UMY4 172 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 ANGPT4Q9Y264 503 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 COQ4Q9Y3A0 265 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 R4GN34 69 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 PCF11O94913 1555 aaKnown RBP1.51□□□□□ -2.17
CCDC38-208ENST00000549876 CCDC144AA2RUR9 1427 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 WRNQ14191 1432 aaPredicted RBP eCLIP1.51□□□□□ -2.17
CCDC38-208ENST00000549876 DSCAML1Q8TD84 2053 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 DICER1Q9UPY3 1922 aaKnown RBP1.51□□□□□ -2.17
CCDC38-208ENST00000549876 GRIFINA4D1Z8 144 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 C9JCJ5 164 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 H3BQV1 296 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 LST1O00453 97 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 PSCAO43653 123 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 CNIH1O95406 144 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 CPSF4O95639 269 aaKnown RBP1.51□□□□□ -2.17
CCDC38-208ENST00000549876 CRYGDP07320 174 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 FGF6P10767 208 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 SLC25A16P16260 332 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 CRYBB3P26998 211 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 TBPL1P62380 186 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 POLR2GP62487 172 aaKnown RBP eCLIP1.51□□□□□ -2.17
CCDC38-208ENST00000549876 IL15RAQ13261 267 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 POU6F1Q14863 301 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 SLC9A3R2Q15599 337 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 IAH1Q2TAA2 248 aaPredicted RBP1.51□□□□□ -2.17
CCDC38-208ENST00000549876 LGALS9BQ3B8N2 356 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 KRTAP25-1Q3LHN0 102 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 LIN52Q52LA3 116 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 LGALS9CQ6DKI2 356 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 LPCAT3Q6P1A2 487 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 RASL11AQ6T310 242 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 AMTNQ6UX39 209 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 LYPD6Q86Y78 171 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 GPHB5Q86YW7 130 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 OR11H1Q8NG94 326 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 OR10P1Q8NGE3 313 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 OR10X1Q8NGY0 326 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 OR2T4Q8NH00 348 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 OR4X1Q8NH49 305 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 OR10A6Q8NH74 314 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 RAB2BQ8WUD1 216 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 RAD51AP1Q96B01 352 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 ROPN1LQ96C74 230 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 CEP19Q96LK0 163 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 PPP1R2P1Q96PQ5 205 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 MGLLQ99685 303 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 CMSS1Q9BQ75 279 aaKnown RBP1.51□□□□□ -2.17
CCDC38-208ENST00000549876 TMEM222Q9H0R3 208 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 CXorf21Q9HAI6 301 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 ASF1BQ9NVP2 202 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 PRELID3BQ9Y3B1 194 aa1.51□□□□□ -2.17
CCDC38-208ENST00000549876 OTOFQ9HC10 1997 aa1.5□□□□□ -2.17
CCDC38-208ENST00000549876 COL18A1P39060 1754 aa1.5□□□□□ -2.17
CCDC38-208ENST00000549876 A8MUN3 132 aa1.5□□□□□ -2.17
CCDC38-208ENST00000549876 TMEM238C9JI98 176 aa1.5□□□□□ -2.17
CCDC38-208ENST00000549876 ZNF878C9JN71 531 aa1.5□□□□□ -2.17
CCDC38-208ENST00000549876 PGRMC1O00264 195 aaKnown RBP1.5□□□□□ -2.17
CCDC38-208ENST00000549876 SYNGR2O43760 224 aa1.5□□□□□ -2.17
CCDC38-208ENST00000549876 OR7C1O76099 320 aaPredicted RBP1.5□□□□□ -2.17
CCDC38-208ENST00000549876 LY6HO94772 140 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms