RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 DRAXINQ8NBI3 349 aaPredicted RBP7.84□□□□□ -1.15
SMARCD1-206ENST00000549274 RNASE11Q8TAA1 199 aaKnown RBP7.84□□□□□ -1.15
SMARCD1-206ENST00000549274 C22orf15Q8WYQ4 148 aa7.84□□□□□ -1.15
SMARCD1-206ENST00000549274 RBPMSQ93062 196 aaKnown RBP7.84□□□□□ -1.15
SMARCD1-206ENST00000549274 TMEM222Q9H0R3 208 aa7.84□□□□□ -1.15
SMARCD1-206ENST00000549274 FKBP11Q9NYL4 201 aa7.84□□□□□ -1.15
SMARCD1-206ENST00000549274 SHPKQ9UHJ6 478 aa7.84□□□□□ -1.15
SMARCD1-206ENST00000549274 SVEP1Q4LDE5 3571 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 TRAV6A0A075B6T7 132 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 IGHV3-72A0A0B4J1Y9 119 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 A6NDX4 124 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 SNRPGP15A8MWD9 76 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 RRHO14718 337 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 HOXA3O43365 443 aaPredicted RBP7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 KCNAB3O43448 404 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 SNAPC5O75971 98 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 ACTL6BO94805 426 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 NDUFA3O95167 84 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 IFNA21P01568 189 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 RNASE1P07998 156 aaKnown RBP7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 OR5AC1P0C628 307 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 MAS1LP35410 378 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 AKR1C2P52895 323 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 UBE2KP61086 200 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 RPL30P62888 115 aaKnown RBP7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 DHRS2Q13268 280 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 THOC7Q6I9Y2 204 aaKnown RBP7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 GLDNQ6ZMI3 551 aaPredicted RBP7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 Q71RC1 249 aaPredicted RBP7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 MRPL41Q8IXM3 137 aaKnown RBP7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 DYNAPQ8N1N2 210 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 LRTM2Q8N967 370 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 DMBX1Q8NFW5 382 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 NPBQ8NG41 125 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 SVIPQ8NHG7 77 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 C17orf50Q8WW18 174 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 R3HDM4Q96D70 268 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 C5orf30Q96GV9 206 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 ZNF48Q96MX3 618 aaPredicted RBP7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 SPIN2AQ99865 258 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 RASL11BQ9BPW5 248 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 SPIN2BQ9BPZ2 258 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 SLC25A33Q9BSK2 321 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 NPFFR1Q9GZQ6 430 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 BET1LQ9NYM9 111 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 TMED3Q9Y3Q3 217 aa7.83□□□□□ -1.16
SMARCD1-206ENST00000549274 C9orf170A2RU37 121 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 DNAJC9-AS1A6NH13 148 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 MARCH11A6NNE9 402 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 NCBP2LA6PVI3 153 aaKnown RBP7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 LCE2BO14633 110 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 EREGO14944 169 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 OR2A4O95047 310 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 CDS2O95674 445 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 IGHV4-59P01825 116 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 IGKV1-16P04430 117 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 VDAC1P21796 283 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 LPAR6P43657 344 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 PPP1R1AQ13522 171 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 TMEM187Q14656 261 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 OR2B11Q5JQS5 317 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 CCBE1Q6UXH8 406 aaPredicted RBP7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 H2BFWTQ7Z2G1 175 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 MMD2Q8IY49 270 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 Q8N6K4 173 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 ADAD2Q8NCV1 583 aaKnown RBP7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 ZNF431Q8TF32 576 aaPredicted RBP7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 GLYATL2Q8WU03 294 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 CHPT1Q8WUD6 406 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 LSM10Q969L4 123 aaKnown RBP7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 TMEM230Q96A57 120 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 TMEM56Q96MV1 263 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 OR2A7Q96R45 310 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 TP53RKQ96S44 253 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 ARPC5LQ9BPX5 153 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 TMEM56-RWDD3S4R434 201 aa7.82□□□□□ -1.16
SMARCD1-206ENST00000549274 FN1P02751 2386 aaKnown RBP7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 MDFIC2A0A1B0GVS7 189 aa7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 GPR137BO60478 399 aa7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 S1PR2O95136 353 aa7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 SLC25A6P12236 298 aa7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 ANXA7P20073 488 aaKnown RBP7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 UBA52P62987 128 aaKnown RBP7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 OXA1LQ15070 435 aa7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 SLC9A3R2Q15599 337 aa7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 C5orf64Q2M2E5 130 aa7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 TMEM268Q5VZI3 342 aa7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 LIN54Q6MZP7 749 aa7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 PPP1R27Q86WC6 154 aa7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 PIFOQ8TCI5 191 aa7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 MITD1Q8WV92 249 aa7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 PDCD10Q9BUL8 212 aa7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 GON7Q9BXV9 100 aa7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 PRSS22Q9GZN4 317 aa7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 METTL1Q9UBP6 276 aaKnown RBP7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 PFDN2Q9UHV9 154 aa7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 PRNDQ9UKY0 176 aa7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 FLVCR2Q9UPI3 526 aa7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 MMP24Q9Y5R2 645 aa7.81□□□□□ -1.16
SMARCD1-206ENST00000549274 A0A1B0GUS0 222 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms