RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 SDHAF2Q9NX18 166 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 COA4Q9NYJ1 87 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 IDI2-AS1Q9NZ38 188 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 DUX4Q9UBX2 424 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 SLC25A10Q9UBX3 287 aaPredicted RBP16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 RNF150Q9ULK6 438 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 PSG11Q9UQ72 335 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 PPIAL4CA0A0B4J2A2 164 aa16.22■□□□□ 0.19
CTDSP2-204ENST00000548823 GPR137BO60478 399 aa16.22■□□□□ 0.19
CTDSP2-204ENST00000548823 GAPDHP04406 335 aaKnown RBP16.22■□□□□ 0.19
CTDSP2-204ENST00000548823 TPT1P13693 172 aaKnown RBP16.22■□□□□ 0.19
CTDSP2-204ENST00000548823 HFEQ30201 348 aa16.22■□□□□ 0.19
CTDSP2-204ENST00000548823 Q3ZCU0 254 aa16.22■□□□□ 0.19
CTDSP2-204ENST00000548823 FOXRED2Q8IWF2 684 aa16.22■□□□□ 0.19
CTDSP2-204ENST00000548823 CD300LFQ8TDQ1 290 aa16.22■□□□□ 0.19
CTDSP2-204ENST00000548823 SLC25A32Q9H2D1 315 aa16.22■□□□□ 0.19
CTDSP2-204ENST00000548823 RCL1Q9Y2P8 373 aaKnown RBP16.22■□□□□ 0.19
CTDSP2-204ENST00000548823 LPAR6P43657 344 aa16.21■□□□□ 0.19
CTDSP2-204ENST00000548823 GPR12P47775 334 aa16.21■□□□□ 0.19
CTDSP2-204ENST00000548823 FAM53AQ6NSI3 398 aaPredicted RBP16.21■□□□□ 0.19
CTDSP2-204ENST00000548823 ALKAL2Q6UX46 152 aa16.21■□□□□ 0.19
CTDSP2-204ENST00000548823 GAL3ST2Q9H3Q3 398 aa16.21■□□□□ 0.19
CTDSP2-204ENST00000548823 ST8SIA5O15466 376 aa16.2■□□□□ 0.18
CTDSP2-204ENST00000548823 NDUFB3O43676 98 aa16.2■□□□□ 0.18
CTDSP2-204ENST00000548823 RPL30P62888 115 aaKnown RBP16.2■□□□□ 0.18
CTDSP2-204ENST00000548823 LCN2P80188 198 aa16.2■□□□□ 0.18
CTDSP2-204ENST00000548823 LRRC10Q5BKY1 277 aa16.2■□□□□ 0.18
CTDSP2-204ENST00000548823 BAP18Q8IXM2 172 aa16.2■□□□□ 0.18
CTDSP2-204ENST00000548823 KIR3DL3Q8N743 410 aa16.2■□□□□ 0.18
CTDSP2-204ENST00000548823 ZNF439Q8NDP4 499 aa16.2■□□□□ 0.18
CTDSP2-204ENST00000548823 IFI27L2Q9H2X8 130 aa16.2■□□□□ 0.18
CTDSP2-204ENST00000548823 A0A0G2JRQ6 117 aa16.19■□□□□ 0.18
CTDSP2-204ENST00000548823 FAM90A26D6RGX4 464 aa16.19■□□□□ 0.18
CTDSP2-204ENST00000548823 RBFOX2O43251 390 aaKnown RBP eCLIP16.19■□□□□ 0.18
CTDSP2-204ENST00000548823 IGKV1-5P01602 117 aa16.19■□□□□ 0.18
CTDSP2-204ENST00000548823 P0C879 139 aa16.19■□□□□ 0.18
CTDSP2-204ENST00000548823 NDUFB7P17568 137 aa16.19■□□□□ 0.18
CTDSP2-204ENST00000548823 KLF17Q5JT82 389 aaPredicted RBP16.19■□□□□ 0.18
CTDSP2-204ENST00000548823 LRRC20Q8TCA0 184 aa16.19■□□□□ 0.18
CTDSP2-204ENST00000548823 TCTEX1D2Q8WW35 142 aa16.19■□□□□ 0.18
CTDSP2-204ENST00000548823 TIMD4Q96H15 378 aa16.19■□□□□ 0.18
CTDSP2-204ENST00000548823 ZC4H2Q9NQZ6 224 aa16.19■□□□□ 0.18
CTDSP2-204ENST00000548823 RPUSD1Q9UJJ7 312 aaKnown RBP16.19■□□□□ 0.18
CTDSP2-204ENST00000548823 NMBP08949 121 aa16.18■□□□□ 0.18
CTDSP2-204ENST00000548823 DUTP33316 252 aaKnown RBP16.18■□□□□ 0.18
CTDSP2-204ENST00000548823 KIR2DS2P43631 304 aa16.18■□□□□ 0.18
CTDSP2-204ENST00000548823 ARHGDIBP52566 201 aa16.18■□□□□ 0.18
CTDSP2-204ENST00000548823 AKR1C2P52895 323 aa16.18■□□□□ 0.18
CTDSP2-204ENST00000548823 CXorf66Q5JRM2 361 aaPredicted RBP16.18■□□□□ 0.18
CTDSP2-204ENST00000548823 SPAG16Q8N0X2 631 aa16.18■□□□□ 0.18
CTDSP2-204ENST00000548823 FGFRL1Q8N441 504 aa16.18■□□□□ 0.18
CTDSP2-204ENST00000548823 RNASE11Q8TAA1 199 aaKnown RBP16.18■□□□□ 0.18
CTDSP2-204ENST00000548823 RAB1CQ92928 201 aa16.18■□□□□ 0.18
CTDSP2-204ENST00000548823 ABHD14AQ9BUJ0 271 aa16.18■□□□□ 0.18
CTDSP2-204ENST00000548823 PROP1O75360 226 aa16.17■□□□□ 0.18
CTDSP2-204ENST00000548823 JTBO76095 146 aa16.17■□□□□ 0.18
CTDSP2-204ENST00000548823 BRWD1-AS2P59051 145 aa16.17■□□□□ 0.18
CTDSP2-204ENST00000548823 RPL31P62899 125 aaKnown RBP16.17■□□□□ 0.18
CTDSP2-204ENST00000548823 LTC4SQ16873 150 aa16.17■□□□□ 0.18
CTDSP2-204ENST00000548823 HEPN1Q6WQI6 88 aa16.17■□□□□ 0.18
CTDSP2-204ENST00000548823 OR2C3Q8N628 320 aa16.17■□□□□ 0.18
CTDSP2-204ENST00000548823 OR4F5Q8NH21 305 aa16.17■□□□□ 0.18
CTDSP2-204ENST00000548823 RAB40CQ96S21 281 aa16.17■□□□□ 0.18
CTDSP2-204ENST00000548823 SLC25A31Q9H0C2 315 aa16.17■□□□□ 0.18
CTDSP2-204ENST00000548823 LINC00473A8K010 186 aa16.16■□□□□ 0.18
CTDSP2-204ENST00000548823 C17orf98A8MV24 154 aa16.16■□□□□ 0.18
CTDSP2-204ENST00000548823 RAB29O14966 203 aa16.16■□□□□ 0.18
CTDSP2-204ENST00000548823 GPR37O15354 613 aa16.16■□□□□ 0.18
CTDSP2-204ENST00000548823 FOXH1O75593 365 aa16.16■□□□□ 0.18
CTDSP2-204ENST00000548823 FCN3O75636 299 aa16.16■□□□□ 0.18
CTDSP2-204ENST00000548823 RRASP10301 218 aa16.16■□□□□ 0.18
CTDSP2-204ENST00000548823 ZNF134P52741 427 aa16.16■□□□□ 0.18
CTDSP2-204ENST00000548823 POLR2GP62487 172 aaKnown RBP eCLIP16.16■□□□□ 0.18
CTDSP2-204ENST00000548823 VAMP2P63027 116 aa16.16■□□□□ 0.18
CTDSP2-204ENST00000548823 CT45A1Q5HYN5 189 aa16.16■□□□□ 0.18
CTDSP2-204ENST00000548823 EIF5AL1Q6IS14 154 aaKnown RBP16.16■□□□□ 0.18
CTDSP2-204ENST00000548823 LYPD2Q6UXB3 125 aa16.16■□□□□ 0.18
CTDSP2-204ENST00000548823 PDZD9Q8IXQ8 264 aa16.16■□□□□ 0.18
CTDSP2-204ENST00000548823 C8orf31Q8N9H6 132 aa16.16■□□□□ 0.18
CTDSP2-204ENST00000548823 CT45A3Q8NHU0 189 aa16.16■□□□□ 0.18
CTDSP2-204ENST00000548823 ADTRPQ96IZ2 230 aa16.16■□□□□ 0.18
CTDSP2-204ENST00000548823 MS4A7Q9GZW8 240 aaPredicted RBP16.16■□□□□ 0.18
CTDSP2-204ENST00000548823 LYRM2Q9NU23 88 aaPredicted RBP16.16■□□□□ 0.18
CTDSP2-204ENST00000548823 FBXL17Q9UF56 701 aa16.16■□□□□ 0.18
CTDSP2-204ENST00000548823 TRBV23-1A0A0A0MS06 115 aa16.15■□□□□ 0.18
CTDSP2-204ENST00000548823 MEX3AA1L020 520 aaKnown RBP16.15■□□□□ 0.18
CTDSP2-204ENST00000548823 FAM90A9PA6NNJ1 464 aa16.15■□□□□ 0.18
CTDSP2-204ENST00000548823 LEUTXA8MZ59 168 aa16.15■□□□□ 0.18
CTDSP2-204ENST00000548823 WRBO00258 174 aa16.15■□□□□ 0.18
CTDSP2-204ENST00000548823 TOR1AO14656 332 aa16.15■□□□□ 0.18
CTDSP2-204ENST00000548823 IGHV2-70P01814 119 aa16.15■□□□□ 0.18
CTDSP2-204ENST00000548823 Q6ZRM9 215 aa16.15■□□□□ 0.18
CTDSP2-204ENST00000548823 SLC25A48Q6ZT89 311 aaKnown RBP16.15■□□□□ 0.18
CTDSP2-204ENST00000548823 UBAC2Q8NBM4 344 aa16.15■□□□□ 0.18
CTDSP2-204ENST00000548823 ZNF714Q96N38 554 aa16.15■□□□□ 0.18
CTDSP2-204ENST00000548823 ARV1Q9H2C2 271 aa16.15■□□□□ 0.18
CTDSP2-204ENST00000548823 C19orf12Q9NSK7 152 aa16.15■□□□□ 0.18
CTDSP2-204ENST00000548823 CTSZQ9UBR2 303 aa16.15■□□□□ 0.18
CTDSP2-204ENST00000548823 CACNG5Q9UF02 275 aa16.15■□□□□ 0.18
CTDSP2-204ENST00000548823 PRELID3BQ9Y3B1 194 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms