RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 S1PR3Q99500 378 aa3.97□□□□□ -1.77
APP-217ENST00000548570 HSD17B10Q99714 261 aaKnown RBP3.97□□□□□ -1.77
APP-217ENST00000548570 C20orf85Q9H1P6 137 aa3.97□□□□□ -1.77
APP-217ENST00000548570 GHITMQ9H3K2 345 aa3.97□□□□□ -1.77
APP-217ENST00000548570 NAA60Q9H7X0 242 aa3.97□□□□□ -1.77
APP-217ENST00000548570 PALMDQ9NP74 551 aa3.97□□□□□ -1.77
APP-217ENST00000548570 TNFRSF19Q9NS68 423 aa3.97□□□□□ -1.77
APP-217ENST00000548570 SLC35D1Q9NTN3 355 aa3.97□□□□□ -1.77
APP-217ENST00000548570 VPREB3Q9UKI3 123 aa3.97□□□□□ -1.77
APP-217ENST00000548570 FAM96BQ9Y3D0 163 aa3.97□□□□□ -1.77
APP-217ENST00000548570 F8P00451 2351 aa3.97□□□□□ -1.77
APP-217ENST00000548570 NIPBLQ6KC79 2804 aaeCLIP3.96□□□□□ -1.78
APP-217ENST00000548570 TRAV6A0A075B6T7 132 aa3.96□□□□□ -1.78
APP-217ENST00000548570 C3orf85A0A1B0GTC6 90 aa3.96□□□□□ -1.78
APP-217ENST00000548570 CGB1A6NKQ9 187 aa3.96□□□□□ -1.78
APP-217ENST00000548570 E7EUB6 86 aa3.96□□□□□ -1.78
APP-217ENST00000548570 H0Y980 276 aa3.96□□□□□ -1.78
APP-217ENST00000548570 RBFOX2O43251 390 aaKnown RBP eCLIP3.96□□□□□ -1.78
APP-217ENST00000548570 TXNL1O43396 289 aa3.96□□□□□ -1.78
APP-217ENST00000548570 GPR137BO60478 399 aa3.96□□□□□ -1.78
APP-217ENST00000548570 B3GALNT1O75752 331 aa3.96□□□□□ -1.78
APP-217ENST00000548570 SLC22A5O76082 557 aa3.96□□□□□ -1.78
APP-217ENST00000548570 OR2F2O95006 317 aa3.96□□□□□ -1.78
APP-217ENST00000548570 NDUFA3O95167 84 aa3.96□□□□□ -1.78
APP-217ENST00000548570 CDS2O95674 445 aa3.96□□□□□ -1.78
APP-217ENST00000548570 CRYZL1O95825 349 aa3.96□□□□□ -1.78
APP-217ENST00000548570 TSPAN15O95858 294 aa3.96□□□□□ -1.78
APP-217ENST00000548570 MOSP00540 346 aa3.96□□□□□ -1.78
APP-217ENST00000548570 IGKV1-5P01602 117 aa3.96□□□□□ -1.78
APP-217ENST00000548570 RNASE1P07998 156 aaKnown RBP3.96□□□□□ -1.78
APP-217ENST00000548570 OR5AC1P0C628 307 aa3.96□□□□□ -1.78
APP-217ENST00000548570 EGR2P11161 476 aaPredicted RBP3.96□□□□□ -1.78
APP-217ENST00000548570 MYOD1P15172 320 aa3.96□□□□□ -1.78
APP-217ENST00000548570 PGAM2P15259 253 aa3.96□□□□□ -1.78
APP-217ENST00000548570 HNF1AP20823 631 aa3.96□□□□□ -1.78
APP-217ENST00000548570 UCP1P25874 307 aa3.96□□□□□ -1.78
APP-217ENST00000548570 LPAR6P43657 344 aa3.96□□□□□ -1.78
APP-217ENST00000548570 RAB25P57735 213 aa3.96□□□□□ -1.78
APP-217ENST00000548570 UBE2MP61081 183 aaKnown RBP3.96□□□□□ -1.78
APP-217ENST00000548570 PJVKQ0ZLH3 352 aa3.96□□□□□ -1.78
APP-217ENST00000548570 PSG5Q15238 335 aa3.96□□□□□ -1.78
APP-217ENST00000548570 RBMS2Q15434 407 aaKnown RBP3.96□□□□□ -1.78
APP-217ENST00000548570 POU2AF1Q16633 256 aa3.96□□□□□ -1.78
APP-217ENST00000548570 IZUMO4Q1ZYL8 232 aa3.96□□□□□ -1.78
APP-217ENST00000548570 C2orf68Q2NKX9 166 aa3.96□□□□□ -1.78
APP-217ENST00000548570 FAM209BQ5JX69 171 aa3.96□□□□□ -1.78
APP-217ENST00000548570 LCE5AQ5TCM9 118 aa3.96□□□□□ -1.78
APP-217ENST00000548570 CCDC144NLQ6NUI1 221 aa3.96□□□□□ -1.78
APP-217ENST00000548570 C16orf87Q6PH81 154 aa3.96□□□□□ -1.78
APP-217ENST00000548570 C11orf88Q6PI97 169 aa3.96□□□□□ -1.78
APP-217ENST00000548570 KCTD9Q7L273 389 aa3.96□□□□□ -1.78
APP-217ENST00000548570 TMED4Q7Z7H5 227 aa3.96□□□□□ -1.78
APP-217ENST00000548570 PDPNQ86YL7 162 aa3.96□□□□□ -1.78
APP-217ENST00000548570 SPAG16Q8N0X2 631 aa3.96□□□□□ -1.78
APP-217ENST00000548570 PUSL1Q8N0Z8 303 aaKnown RBP3.96□□□□□ -1.78
APP-217ENST00000548570 TMEM86BQ8N661 226 aa3.96□□□□□ -1.78
APP-217ENST00000548570 C5orf56Q8N8D9 126 aa3.96□□□□□ -1.78
APP-217ENST00000548570 OR52B4Q8NGK2 314 aa3.96□□□□□ -1.78
APP-217ENST00000548570 ZFAND1Q8TCF1 268 aa3.96□□□□□ -1.78
APP-217ENST00000548570 SSMEM1Q8WWF3 244 aa3.96□□□□□ -1.78
APP-217ENST00000548570 GALNT14Q96FL9 552 aa3.96□□□□□ -1.78
APP-217ENST00000548570 SEC22AQ96IW7 307 aa3.96□□□□□ -1.78
APP-217ENST00000548570 TMEM56Q96MV1 263 aa3.96□□□□□ -1.78
APP-217ENST00000548570 RBM14Q96PK6 669 aaKnown RBP3.96□□□□□ -1.78
APP-217ENST00000548570 HSPB9Q9BQS6 159 aa3.96□□□□□ -1.78
APP-217ENST00000548570 SLC25A21Q9BQT8 299 aaPredicted RBP3.96□□□□□ -1.78
APP-217ENST00000548570 SEC22CQ9BRL7 303 aa3.96□□□□□ -1.78
APP-217ENST00000548570 MARVELD1Q9BSK0 173 aa3.96□□□□□ -1.78
APP-217ENST00000548570 TMEM222Q9H0R3 208 aa3.96□□□□□ -1.78
APP-217ENST00000548570 ALX4Q9H161 411 aaPredicted RBP3.96□□□□□ -1.78
APP-217ENST00000548570 DPAGT1Q9H3H5 408 aa3.96□□□□□ -1.78
APP-217ENST00000548570 FBXL15Q9H469 300 aa3.96□□□□□ -1.78
APP-217ENST00000548570 ZNF702PQ9H963 129 aa3.96□□□□□ -1.78
APP-217ENST00000548570 BEX1Q9HBH7 125 aa3.96□□□□□ -1.78
APP-217ENST00000548570 NUDT15Q9NV35 164 aa3.96□□□□□ -1.78
APP-217ENST00000548570 C1RLQ9NZP8 487 aa3.96□□□□□ -1.78
APP-217ENST00000548570 SCP2D1Q9UJQ7 156 aa3.96□□□□□ -1.78
APP-217ENST00000548570 SIGLEC9Q9Y336 463 aa3.96□□□□□ -1.78
APP-217ENST00000548570 WASHC3Q9Y3C0 194 aa3.96□□□□□ -1.78
APP-217ENST00000548570 FBXO7Q9Y3I1 522 aa3.96□□□□□ -1.78
APP-217ENST00000548570 RBM7Q9Y580 266 aaKnown RBP3.96□□□□□ -1.78
APP-217ENST00000548570 POMT1Q9Y6A1 747 aa3.96□□□□□ -1.78
APP-217ENST00000548570 TMEM56-RWDD3S4R434 201 aa3.96□□□□□ -1.78
APP-217ENST00000548570 MTORP42345 2549 aa3.96□□□□□ -1.78
APP-217ENST00000548570 TEP1Q99973 2627 aaKnown RBP3.95□□□□□ -1.78
APP-217ENST00000548570 YLPM1P49750 1951 aaKnown RBP3.95□□□□□ -1.78
APP-217ENST00000548570 IGHV7-81A0A0B4J1V7 117 aa3.95□□□□□ -1.78
APP-217ENST00000548570 TEX13DA0A0J9YY54 714 aaPredicted RBP3.95□□□□□ -1.78
APP-217ENST00000548570 FAM240BA0A1B0GVZ2 78 aa3.95□□□□□ -1.78
APP-217ENST00000548570 C9orf170A2RU37 121 aa3.95□□□□□ -1.78
APP-217ENST00000548570 MPTX1A8MV57 137 aa3.95□□□□□ -1.78
APP-217ENST00000548570 RRHO14718 337 aa3.95□□□□□ -1.78
APP-217ENST00000548570 SFT2D2O95562 160 aa3.95□□□□□ -1.78
APP-217ENST00000548570 HPRT1P00492 218 aa3.95□□□□□ -1.78
APP-217ENST00000548570 OR4E1P0C645 316 aa3.95□□□□□ -1.78
APP-217ENST00000548570 OR9G9P0C7N8 305 aa3.95□□□□□ -1.78
APP-217ENST00000548570 FAM106CPP0CH98 169 aa3.95□□□□□ -1.78
APP-217ENST00000548570 SAA1P0DJI8 122 aaPredicted RBP3.95□□□□□ -1.78
APP-217ENST00000548570 RPA2P15927 270 aa3.95□□□□□ -1.78
APP-217ENST00000548570 TMEM11P17152 192 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms