RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 DIDO1Q9BTC0 2240 aaKnown RBP2.38□□□□□ -2.03
PTCH1-216ENST00000548379 MYO7BQ6PIF6 2116 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 VPS13CQ709C8 3753 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 NSD1Q96L73 2696 aaPredicted RBP2.37□□□□□ -2.03
PTCH1-216ENST00000548379 SVILO95425 2214 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 MED13LQ71F56 2210 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 NUP214P35658 2090 aaPredicted RBP2.37□□□□□ -2.03
PTCH1-216ENST00000548379 ABCA4P78363 2273 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 COL6A5A8TX70 2615 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 IGLV4-60A0A075B6I1 120 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 IGHV3OR16-9A0A0B4J2B5 98 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 RPL36A-HNRNPH2H7BZ11 118 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 H7C1H1 209 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 CLDN34H7C241 214 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 FAAHO00519 579 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 GABRPO00591 440 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 COPEO14579 308 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 PIN1P1O15428 100 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 CPSF4O95639 269 aaKnown RBP2.37□□□□□ -2.03
PTCH1-216ENST00000548379 GCGP01275 180 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 APCSP02743 223 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 MRPL3P09001 348 aaKnown RBP2.37□□□□□ -2.03
PTCH1-216ENST00000548379 OR8U9P0C7N5 309 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 PGA5P0DJD9 388 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 RAB5AP20339 215 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 DTYMKP23919 212 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 APLNRP35414 380 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 GUCA1AP43080 201 aaPredicted RBP2.37□□□□□ -2.03
PTCH1-216ENST00000548379 CRATP43155 626 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 NCALDP61601 193 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 HBA1P69905 142 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 PMS2P3Q13401 168 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 MAD2L1BPQ15013 274 aaPredicted RBP2.37□□□□□ -2.03
PTCH1-216ENST00000548379 SLC9A3R2Q15599 337 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 TBC1D28Q2M2D7 210 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 SLC36A2Q495M3 483 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 GCSAMLQ5JQS6 135 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 C1orf140Q5VVS0 124 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 NANOGP8Q6NSW7 305 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 FAHD1Q6P587 224 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 TNFAIP8L2Q6P589 184 aaPredicted RBP2.37□□□□□ -2.03
PTCH1-216ENST00000548379 LRRN1Q6UXK5 716 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 ZCCHC23Q6ZST2 131 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 TRMT10CQ7L0Y3 403 aaKnown RBP2.37□□□□□ -2.03
PTCH1-216ENST00000548379 SLC16A13Q7RTY0 426 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 MRPL55Q7Z7F7 128 aaKnown RBP2.37□□□□□ -2.03
PTCH1-216ENST00000548379 C1orf174Q8IYL3 243 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 CBR4Q8N4T8 237 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 ZIC4Q8N9L1 334 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 CYB561A3Q8NBI2 242 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 SLC30A7Q8NEW0 376 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 OR11H7Q8NGC8 314 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 OR10W1Q8NGF6 305 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 MFSD8Q8NHS3 518 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 COQ8AQ8NI60 647 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 OR51E1Q8TCB6 317 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 LRRC29Q8WV35 223 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 GTF2H4Q92759 462 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 FRZBQ92765 325 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 YIPF5Q969M3 257 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 SCGB3A2Q96PL1 93 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 C1orf50Q9BV19 199 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 OR52D1Q9H346 318 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 EDA2RQ9HAV5 297 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 MED4Q9NPJ6 270 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 MARCOQ9UEW3 520 aaPredicted RBP2.37□□□□□ -2.03
PTCH1-216ENST00000548379 DNAJC15Q9Y5T4 150 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 CSPG4Q6UVK1 2322 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 DSPPQ9NZW4 1301 aa2.37□□□□□ -2.03
PTCH1-216ENST00000548379 NBEAL1Q6ZS30 2694 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 ATRQ13535 2644 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 IGKV2-28A0A075B6P5 120 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 TRAV36DV7A0A075B6V5 113 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 CLPSL1A2RUU4 121 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 TVP23AA6NH52 213 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 CLDN24A6NM45 220 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 SEC14L6B5MCN3 397 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 C5orf58C9J3I9 102 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 ANKRD65E5RJM6 399 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 K7EN84 100 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 PLIN3O60664 434 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 BRI3O95415 125 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 KRT75O95678 551 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 IGKV2D-28P01615 120 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 IGHMP01871 453 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 PGA4P0DJD7 388 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 PGA3P0DJD8 388 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 ZNF35P13682 527 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 MUC1P15941 1255 aaPredicted RBP2.36□□□□□ -2.03
PTCH1-216ENST00000548379 ZNF14P17017 642 aaPredicted RBP2.36□□□□□ -2.03
PTCH1-216ENST00000548379 S100A3P33764 101 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 PFN2P35080 140 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 RAB7AP51149 207 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 TAS2R60P59551 318 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 PAFAH1B2P68402 229 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 TNFAIP6P98066 277 aaPredicted RBP2.36□□□□□ -2.03
PTCH1-216ENST00000548379 EMX2Q04743 252 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 GLO1Q04760 184 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 BNIP2Q12982 314 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 MOBPQ13875 183 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms