RNA–Protein interactions for RNA: ENST00000548279.5

CACNB3-208, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-208ENST00000548279 CCL28Q9NRJ3 127 aa17.79■□□□□ 0.44
CACNB3-208ENST00000548279 TAS2R8Q9NYW2 309 aa17.79■□□□□ 0.44
CACNB3-208ENST00000548279 ZMAT5Q9UDW3 170 aaKnown RBP17.79■□□□□ 0.44
CACNB3-208ENST00000548279 LSM4Q9Y4Z0 139 aaKnown RBP17.79■□□□□ 0.44
CACNB3-208ENST00000548279 NCS1P62166 190 aa17.78■□□□□ 0.44
CACNB3-208ENST00000548279 CDK10Q15131 360 aa17.78■□□□□ 0.44
CACNB3-208ENST00000548279 UBE2NLQ5JXB2 153 aa17.78■□□□□ 0.44
CACNB3-208ENST00000548279 CROCCP3Q8IVE0 287 aa17.78■□□□□ 0.44
CACNB3-208ENST00000548279 MFSD4AQ8N468 514 aa17.78■□□□□ 0.44
CACNB3-208ENST00000548279 SAMD12Q8N8I0 201 aa17.78■□□□□ 0.44
CACNB3-208ENST00000548279 OR13F1Q8NGS4 319 aa17.78■□□□□ 0.44
CACNB3-208ENST00000548279 SECTM1Q8WVN6 248 aa17.78■□□□□ 0.44
CACNB3-208ENST00000548279 TCTEX1D2Q8WW35 142 aa17.78■□□□□ 0.44
CACNB3-208ENST00000548279 ACOT12Q8WYK0 555 aa17.78■□□□□ 0.44
CACNB3-208ENST00000548279 HSD17B10Q99714 261 aaKnown RBP17.78■□□□□ 0.44
CACNB3-208ENST00000548279 DCUN1D5Q9BTE7 237 aa17.78■□□□□ 0.44
CACNB3-208ENST00000548279 FUNDC2Q9BWH2 189 aa17.78■□□□□ 0.44
CACNB3-208ENST00000548279 TINAGL1Q9GZM7 467 aaPredicted RBP17.78■□□□□ 0.44
CACNB3-208ENST00000548279 PRELID3BQ9Y3B1 194 aa17.78■□□□□ 0.44
CACNB3-208ENST00000548279 TNFSF12O43508 249 aa17.77■□□□□ 0.44
CACNB3-208ENST00000548279 PPYP01298 95 aa17.77■□□□□ 0.44
CACNB3-208ENST00000548279 ADAD2Q8NCV1 583 aaKnown RBP17.77■□□□□ 0.44
CACNB3-208ENST00000548279 TMEM68Q96MH6 324 aa17.77■□□□□ 0.44
CACNB3-208ENST00000548279 PHB2Q99623 299 aa17.77■□□□□ 0.44
CACNB3-208ENST00000548279 B9D2Q9BPU9 175 aa17.77■□□□□ 0.44
CACNB3-208ENST00000548279 MRPS7Q9Y2R9 242 aaKnown RBP17.77■□□□□ 0.44
CACNB3-208ENST00000548279 INSL3P51460 131 aa17.76■□□□□ 0.43
CACNB3-208ENST00000548279 TAS2R20P59543 309 aa17.76■□□□□ 0.43
CACNB3-208ENST00000548279 ACSM6Q6P461 480 aa17.76■□□□□ 0.43
CACNB3-208ENST00000548279 SLC25A46Q96AG3 418 aa17.76■□□□□ 0.43
CACNB3-208ENST00000548279 S100A16Q96FQ6 103 aaKnown RBP17.76■□□□□ 0.43
CACNB3-208ENST00000548279 COA4Q9NYJ1 87 aa17.76■□□□□ 0.43
CACNB3-208ENST00000548279 ZNF256Q9Y2P7 627 aaPredicted RBP17.76■□□□□ 0.43
CACNB3-208ENST00000548279 C13orf42A0A1B0GVH6 325 aa17.75■□□□□ 0.43
CACNB3-208ENST00000548279 ANKRD34BA5PLL1 514 aa17.75■□□□□ 0.43
CACNB3-208ENST00000548279 SAP30O75446 220 aa17.75■□□□□ 0.43
CACNB3-208ENST00000548279 BRI3O95415 125 aa17.75■□□□□ 0.43
CACNB3-208ENST00000548279 SMIM18P0DKX4 95 aa17.75■□□□□ 0.43
CACNB3-208ENST00000548279 CBX5P45973 191 aa17.75■□□□□ 0.43
CACNB3-208ENST00000548279 VBP1P61758 197 aa17.75■□□□□ 0.43
CACNB3-208ENST00000548279 DYRK1AQ13627 763 aa17.75■□□□□ 0.43
CACNB3-208ENST00000548279 ZNF66Q6ZN08 573 aa17.75■□□□□ 0.43
CACNB3-208ENST00000548279 ZNF429Q86V71 674 aa17.75■□□□□ 0.43
CACNB3-208ENST00000548279 OR5AP2Q8NGF4 316 aa17.75■□□□□ 0.43
CACNB3-208ENST00000548279 OR4S2Q8NH73 311 aa17.75■□□□□ 0.43
CACNB3-208ENST00000548279 ANAPC10Q9UM13 185 aa17.75■□□□□ 0.43
CACNB3-208ENST00000548279 PRH1P02810 166 aa17.74■□□□□ 0.43
CACNB3-208ENST00000548279 EIF4EP06730 217 aaKnown RBP17.74■□□□□ 0.43
CACNB3-208ENST00000548279 FXYD4P59646 89 aa17.74■□□□□ 0.43
CACNB3-208ENST00000548279 CD69Q07108 199 aa17.74■□□□□ 0.43
CACNB3-208ENST00000548279 TMEM69Q5SWH9 247 aa17.74■□□□□ 0.43
CACNB3-208ENST00000548279 MMD2Q8IY49 270 aa17.74■□□□□ 0.43
CACNB3-208ENST00000548279 PUSL1Q8N0Z8 303 aaKnown RBP17.74■□□□□ 0.43
CACNB3-208ENST00000548279 SLC5A7Q9GZV3 580 aa17.74■□□□□ 0.43
CACNB3-208ENST00000548279 TRBV12-3P01733 135 aa17.73■□□□□ 0.43
CACNB3-208ENST00000548279 OR9G9P0C7N8 305 aa17.73■□□□□ 0.43
CACNB3-208ENST00000548279 ZNF45Q02386 682 aa17.73■□□□□ 0.43
CACNB3-208ENST00000548279 MSMO1Q15800 293 aa17.73■□□□□ 0.43
CACNB3-208ENST00000548279 GIMAP1Q8WWP7 306 aa17.73■□□□□ 0.43
CACNB3-208ENST00000548279 NAA50Q9GZZ1 169 aaKnown RBP17.73■□□□□ 0.43
CACNB3-208ENST00000548279 IFT46Q9NQC8 304 aa17.73■□□□□ 0.43
CACNB3-208ENST00000548279 ADAM30Q9UKF2 790 aa17.73■□□□□ 0.43
CACNB3-208ENST00000548279 A0A0G2JLM5 398 aa17.72■□□□□ 0.43
CACNB3-208ENST00000548279 A0A1B0GW64 132 aa17.72■□□□□ 0.43
CACNB3-208ENST00000548279 TEX22C9J3V5 150 aa17.72■□□□□ 0.43
CACNB3-208ENST00000548279 E7EUB6 86 aa17.72■□□□□ 0.43
CACNB3-208ENST00000548279 KBTBD11O94819 623 aa17.72■□□□□ 0.43
CACNB3-208ENST00000548279 LY86O95711 162 aa17.72■□□□□ 0.43
CACNB3-208ENST00000548279 ZNF818PQ6ZRF7 136 aa17.72■□□□□ 0.43
CACNB3-208ENST00000548279 C19orf35Q6ZS72 473 aa17.72■□□□□ 0.43
CACNB3-208ENST00000548279 SSX9Q7RTT3 188 aa17.72■□□□□ 0.43
CACNB3-208ENST00000548279 HAPLN4Q86UW8 402 aa17.72■□□□□ 0.43
CACNB3-208ENST00000548279 TMEM167AQ8TBQ9 72 aa17.72■□□□□ 0.43
CACNB3-208ENST00000548279 RANGRFQ9HD47 186 aaPredicted RBP17.72■□□□□ 0.43
CACNB3-208ENST00000548279 COMMD3Q9UBI1 195 aa17.72■□□□□ 0.43
CACNB3-208ENST00000548279 HMX3A6NHT5 357 aa17.71■□□□□ 0.43
CACNB3-208ENST00000548279 MPPED1O15442 326 aa17.71■□□□□ 0.43
CACNB3-208ENST00000548279 OR2A4O95047 310 aa17.71■□□□□ 0.43
CACNB3-208ENST00000548279 MYOD1P15172 320 aa17.71■□□□□ 0.43
CACNB3-208ENST00000548279 SPNP16150 400 aa17.71■□□□□ 0.43
CACNB3-208ENST00000548279 RFX2P48378 723 aa17.71■□□□□ 0.43
CACNB3-208ENST00000548279 ZNF343Q6P1L6 599 aa17.71■□□□□ 0.43
CACNB3-208ENST00000548279 TMEM17Q86X19 198 aa17.71■□□□□ 0.43
CACNB3-208ENST00000548279 KCTD12Q96CX2 325 aaKnown RBP17.71■□□□□ 0.43
CACNB3-208ENST00000548279 OR2A7Q96R45 310 aa17.71■□□□□ 0.43
CACNB3-208ENST00000548279 EHFQ9NZC4 300 aa17.71■□□□□ 0.43
CACNB3-208ENST00000548279 SULT1C2O00338 296 aa17.7■□□□□ 0.42
CACNB3-208ENST00000548279 CREBL2O60519 120 aaPredicted RBP17.7■□□□□ 0.42
CACNB3-208ENST00000548279 ACTL6BO94805 426 aa17.7■□□□□ 0.42
CACNB3-208ENST00000548279 IL6RP08887 468 aaPredicted RBP17.7■□□□□ 0.42
CACNB3-208ENST00000548279 DCTN2Q13561 401 aaKnown RBP17.7■□□□□ 0.42
CACNB3-208ENST00000548279 SPAG16Q8N0X2 631 aa17.7■□□□□ 0.42
CACNB3-208ENST00000548279 SPIN2AQ99865 258 aa17.7■□□□□ 0.42
CACNB3-208ENST00000548279 SPIN2BQ9BPZ2 258 aa17.7■□□□□ 0.42
CACNB3-208ENST00000548279 AKIP1Q9NQ31 210 aa17.7■□□□□ 0.42
CACNB3-208ENST00000548279 PMP2P02689 132 aa17.69■□□□□ 0.42
CACNB3-208ENST00000548279 NAT1P18440 290 aa17.69■□□□□ 0.42
CACNB3-208ENST00000548279 KIR2DS2P43631 304 aa17.69■□□□□ 0.42
CACNB3-208ENST00000548279 RHOGP84095 191 aa17.69■□□□□ 0.42
CACNB3-208ENST00000548279 VAX1Q5SQQ9 334 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms