RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 COMMD9Q9P000 198 aa14.02□□□□□ -0.16
HDAC7-227ENST00000548080 G3V3Q6 166 aa14.01□□□□□ -0.17
HDAC7-227ENST00000548080 IGLV1-47P01700 117 aa14.01□□□□□ -0.17
HDAC7-227ENST00000548080 NKX2-5P52952 324 aaPredicted RBP14.01□□□□□ -0.17
HDAC7-227ENST00000548080 FGL1Q08830 312 aa14.01□□□□□ -0.17
HDAC7-227ENST00000548080 ZNF816Q0VGE8 651 aaPredicted RBP14.01□□□□□ -0.17
HDAC7-227ENST00000548080 HLA-DRB5Q30154 266 aa14.01□□□□□ -0.17
HDAC7-227ENST00000548080 LDLRAD2Q5SZI1 272 aa14.01□□□□□ -0.17
HDAC7-227ENST00000548080 DYNAPQ8N1N2 210 aa14.01□□□□□ -0.17
HDAC7-227ENST00000548080 ZBTB8BQ8NAP8 495 aaPredicted RBP14.01□□□□□ -0.17
HDAC7-227ENST00000548080 OR11H6Q8NGC7 330 aa14.01□□□□□ -0.17
HDAC7-227ENST00000548080 DDB2Q92466 427 aa14.01□□□□□ -0.17
HDAC7-227ENST00000548080 TAF15Q92804 592 aaKnown RBP eCLIP14.01□□□□□ -0.17
HDAC7-227ENST00000548080 ST6GALNAC6Q969X2 333 aa14.01□□□□□ -0.17
HDAC7-227ENST00000548080 HYLS1Q96M11 299 aa14.01□□□□□ -0.17
HDAC7-227ENST00000548080 GSKIPQ9P0R6 139 aa14.01□□□□□ -0.17
HDAC7-227ENST00000548080 ODF3BA8MYP8 253 aa14□□□□□ -0.17
HDAC7-227ENST00000548080 RBFOX2O43251 390 aaKnown RBP eCLIP14□□□□□ -0.17
HDAC7-227ENST00000548080 FCGR3BO75015 233 aa14□□□□□ -0.17
HDAC7-227ENST00000548080 ATG12O94817 140 aa14□□□□□ -0.17
HDAC7-227ENST00000548080 IGHV4-59P01825 116 aa14□□□□□ -0.17
HDAC7-227ENST00000548080 CT45A6P0DMU7 189 aa14□□□□□ -0.17
HDAC7-227ENST00000548080 CT45A5P0DMU8 189 aa14□□□□□ -0.17
HDAC7-227ENST00000548080 CT45A7P0DMV0 189 aa14□□□□□ -0.17
HDAC7-227ENST00000548080 LGALS4P56470 323 aa14□□□□□ -0.17
HDAC7-227ENST00000548080 UBA52P62987 128 aaKnown RBP14□□□□□ -0.17
HDAC7-227ENST00000548080 IL15RAQ13261 267 aa14□□□□□ -0.17
HDAC7-227ENST00000548080 NMSQ5H8A3 153 aa14□□□□□ -0.17
HDAC7-227ENST00000548080 ZNF383Q8NA42 475 aa14□□□□□ -0.17
HDAC7-227ENST00000548080 PPP1R1CQ8WVI7 109 aa14□□□□□ -0.17
HDAC7-227ENST00000548080 LSM10Q969L4 123 aaKnown RBP14□□□□□ -0.17
HDAC7-227ENST00000548080 SPIN2AQ99865 258 aa14□□□□□ -0.17
HDAC7-227ENST00000548080 SPIN2BQ9BPZ2 258 aa14□□□□□ -0.17
HDAC7-227ENST00000548080 AMMECR1Q9Y4X0 333 aaPredicted RBP14□□□□□ -0.17
HDAC7-227ENST00000548080 COL6A5A8TX70 2615 aa14□□□□□ -0.17
HDAC7-227ENST00000548080 S1PR2O95136 353 aa13.99□□□□□ -0.17
HDAC7-227ENST00000548080 FBP1P09467 338 aa13.99□□□□□ -0.17
HDAC7-227ENST00000548080 Q6YL49 198 aa13.99□□□□□ -0.17
HDAC7-227ENST00000548080 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.99□□□□□ -0.17
HDAC7-227ENST00000548080 OR11H4Q8NGC9 324 aa13.99□□□□□ -0.17
HDAC7-227ENST00000548080 RNASE11Q8TAA1 199 aaKnown RBP13.99□□□□□ -0.17
HDAC7-227ENST00000548080 MRPL20Q9BYC9 149 aaKnown RBP13.99□□□□□ -0.17
HDAC7-227ENST00000548080 BUB1B-PAK6H3BSN5 160 aa13.99□□□□□ -0.17
HDAC7-227ENST00000548080 HPRT1P00492 218 aa13.99□□□□□ -0.17
HDAC7-227ENST00000548080 IGKV1-5P01602 117 aa13.99□□□□□ -0.17
HDAC7-227ENST00000548080 PSMB6P28072 239 aa13.99□□□□□ -0.17
HDAC7-227ENST00000548080 AKR1C2P52895 323 aa13.99□□□□□ -0.17
HDAC7-227ENST00000548080 TAGLNQ01995 201 aaKnown RBP13.99□□□□□ -0.17
HDAC7-227ENST00000548080 MIDNQ504T8 468 aa13.99□□□□□ -0.17
HDAC7-227ENST00000548080 OR4P4Q8NGL7 312 aa13.99□□□□□ -0.17
HDAC7-227ENST00000548080 GPR146Q96CH1 333 aa13.99□□□□□ -0.17
HDAC7-227ENST00000548080 RRNAD1Q96FB5 475 aaKnown RBP13.99□□□□□ -0.17
HDAC7-227ENST00000548080 JMJD8Q96S16 334 aa13.99□□□□□ -0.17
HDAC7-227ENST00000548080 PLEKHA2Q9HB19 425 aa13.99□□□□□ -0.17
HDAC7-227ENST00000548080 TRAV14DV4A0A0A6YYC5 116 aa13.98□□□□□ -0.17
HDAC7-227ENST00000548080 A0A1B0GU03 582 aa13.98□□□□□ -0.17
HDAC7-227ENST00000548080 SLC25A6P12236 298 aa13.98□□□□□ -0.17
HDAC7-227ENST00000548080 REG1BP48304 166 aa13.98□□□□□ -0.17
HDAC7-227ENST00000548080 LRRC37A5PQ49AS3 106 aa13.98□□□□□ -0.17
HDAC7-227ENST00000548080 THOC7Q6I9Y2 204 aaKnown RBP13.98□□□□□ -0.17
HDAC7-227ENST00000548080 TGIF2LXQ8IUE1 241 aa13.98□□□□□ -0.17
HDAC7-227ENST00000548080 OR4S2Q8NH73 311 aa13.98□□□□□ -0.17
HDAC7-227ENST00000548080 NABP2Q9BQ15 211 aa13.98□□□□□ -0.17
HDAC7-227ENST00000548080 PRDM13Q9H4Q3 707 aa13.98□□□□□ -0.17
HDAC7-227ENST00000548080 HILPDAQ9Y5L2 63 aa13.98□□□□□ -0.17
HDAC7-227ENST00000548080 A0A0G2JRQ6 117 aa13.97□□□□□ -0.17
HDAC7-227ENST00000548080 TRIM77I1YAP6 450 aa13.97□□□□□ -0.17
HDAC7-227ENST00000548080 MPC2O95563 127 aa13.97□□□□□ -0.17
HDAC7-227ENST00000548080 KRASP01116 189 aa13.97□□□□□ -0.17
HDAC7-227ENST00000548080 RRASP10301 218 aa13.97□□□□□ -0.17
HDAC7-227ENST00000548080 SLC25A4P12235 298 aa13.97□□□□□ -0.17
HDAC7-227ENST00000548080 DIAPH2-AS1Q14236 149 aa13.97□□□□□ -0.17
HDAC7-227ENST00000548080 SSX2Q16385 188 aa13.97□□□□□ -0.17
HDAC7-227ENST00000548080 RTL8BQ17RB0 113 aa13.97□□□□□ -0.17
HDAC7-227ENST00000548080 FAM219AQ8IW50 185 aa13.97□□□□□ -0.17
HDAC7-227ENST00000548080 OR5AN1Q8NGI8 311 aa13.97□□□□□ -0.17
HDAC7-227ENST00000548080 OR4D5Q8NGN0 318 aa13.97□□□□□ -0.17
HDAC7-227ENST00000548080 R3HDM4Q96D70 268 aa13.97□□□□□ -0.17
HDAC7-227ENST00000548080 C19orf24Q9BVV8 132 aa13.97□□□□□ -0.17
HDAC7-227ENST00000548080 SLC35D1Q9NTN3 355 aa13.97□□□□□ -0.17
HDAC7-227ENST00000548080 MMP24Q9Y5R2 645 aa13.97□□□□□ -0.17
HDAC7-227ENST00000548080 LY6LH3BQJ8 138 aa13.96□□□□□ -0.17
HDAC7-227ENST00000548080 APOA2P02652 100 aa13.96□□□□□ -0.17
HDAC7-227ENST00000548080 GAPDHP04406 335 aaKnown RBP13.96□□□□□ -0.17
HDAC7-227ENST00000548080 HTR1DP28221 377 aa13.96□□□□□ -0.17
HDAC7-227ENST00000548080 G6PCP35575 357 aa13.96□□□□□ -0.17
HDAC7-227ENST00000548080 IER3P46695 156 aa13.96□□□□□ -0.17
HDAC7-227ENST00000548080 RAB13P51153 203 aa13.96□□□□□ -0.17
HDAC7-227ENST00000548080 RAB32Q13637 225 aa13.96□□□□□ -0.17
HDAC7-227ENST00000548080 KRTAP21-3Q3LHN1 58 aa13.96□□□□□ -0.17
HDAC7-227ENST00000548080 C11orf87Q6NUJ2 197 aa13.96□□□□□ -0.17
HDAC7-227ENST00000548080 THAP6Q8TBB0 222 aa13.96□□□□□ -0.17
HDAC7-227ENST00000548080 TMEM158Q8WZ71 300 aa13.96□□□□□ -0.17
HDAC7-227ENST00000548080 FXYD6-FXYD2A0A087WZ82 144 aa13.95□□□□□ -0.18
HDAC7-227ENST00000548080 LEUTXA8MZ59 168 aa13.95□□□□□ -0.18
HDAC7-227ENST00000548080 H0YJW9 148 aa13.95□□□□□ -0.18
HDAC7-227ENST00000548080 H3BUX3 64 aa13.95□□□□□ -0.18
HDAC7-227ENST00000548080 TXNL1O43396 289 aa13.95□□□□□ -0.18
HDAC7-227ENST00000548080 CRYZL1O95825 349 aa13.95□□□□□ -0.18
HDAC7-227ENST00000548080 P0C879 139 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms