RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 FSCN3Q9NQT6 498 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 ZNF586Q9NXT0 402 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 SDK1Q7Z5N4 2213 aa11.85□□□□□ -0.51
SRP54-202ENST00000546080 MT-CO3P00414 261 aa11.85□□□□□ -0.51
SRP54-202ENST00000546080 CEBPDP49716 269 aaPredicted RBP11.85□□□□□ -0.51
SRP54-202ENST00000546080 LGALS4P56470 323 aa11.85□□□□□ -0.51
SRP54-202ENST00000546080 TGFBR3Q03167 851 aa11.85□□□□□ -0.51
SRP54-202ENST00000546080 Q0VFX4 171 aa11.85□□□□□ -0.51
SRP54-202ENST00000546080 RPEL1Q2QD12 228 aa11.85□□□□□ -0.51
SRP54-202ENST00000546080 SAP25Q8TEE9 199 aa11.85□□□□□ -0.51
SRP54-202ENST00000546080 LRFN3Q9BTN0 628 aa11.85□□□□□ -0.51
SRP54-202ENST00000546080 FBXL7Q9UJT9 491 aa11.85□□□□□ -0.51
SRP54-202ENST00000546080 ZFP30Q9Y2G7 519 aa11.85□□□□□ -0.51
SRP54-202ENST00000546080 BRWD1Q9NSI6 2320 aa11.85□□□□□ -0.51
SRP54-202ENST00000546080 LNP1A1A4G5 178 aa11.85□□□□□ -0.51
SRP54-202ENST00000546080 K7EN84 100 aa11.85□□□□□ -0.51
SRP54-202ENST00000546080 CDIPTO14735 213 aa11.85□□□□□ -0.51
SRP54-202ENST00000546080 SIAH2O43255 324 aa11.85□□□□□ -0.51
SRP54-202ENST00000546080 HAND1O96004 215 aa11.85□□□□□ -0.51
SRP54-202ENST00000546080 HBZP02008 142 aa11.85□□□□□ -0.51
SRP54-202ENST00000546080 PCP4P48539 62 aa11.85□□□□□ -0.51
SRP54-202ENST00000546080 CYB561P49447 251 aa11.85□□□□□ -0.51
SRP54-202ENST00000546080 RPP30P78346 268 aaKnown RBP11.85□□□□□ -0.51
SRP54-202ENST00000546080 PSG7Q13046 419 aa11.85□□□□□ -0.51
SRP54-202ENST00000546080 BOKQ9UMX3 212 aaPredicted RBP11.85□□□□□ -0.51
SRP54-202ENST00000546080 YTHDF2Q9Y5A9 579 aaKnown RBP11.85□□□□□ -0.51
SRP54-202ENST00000546080 TRBV9A0A0B4J1U6 114 aa11.84□□□□□ -0.51
SRP54-202ENST00000546080 IGHV3-64DA0A0J9YX35 117 aa11.84□□□□□ -0.51
SRP54-202ENST00000546080 OOEPA6NGQ2 149 aa11.84□□□□□ -0.51
SRP54-202ENST00000546080 DIRC3C9JPN6 131 aa11.84□□□□□ -0.51
SRP54-202ENST00000546080 RRHO14718 337 aa11.84□□□□□ -0.51
SRP54-202ENST00000546080 CHRNB4P30926 498 aa11.84□□□□□ -0.51
SRP54-202ENST00000546080 RPL31P62899 125 aaKnown RBP11.84□□□□□ -0.51
SRP54-202ENST00000546080 ZNF718Q3SXZ3 478 aa11.84□□□□□ -0.51
SRP54-202ENST00000546080 MIC13Q5XKP0 118 aa11.84□□□□□ -0.51
SRP54-202ENST00000546080 C11orf42Q8N5U0 333 aa11.84□□□□□ -0.51
SRP54-202ENST00000546080 MSL2Q9HCI7 577 aa11.84□□□□□ -0.51
SRP54-202ENST00000546080 DOCK11Q5JSL3 2073 aa11.84□□□□□ -0.51
SRP54-202ENST00000546080 TCF21O43680 179 aa11.84□□□□□ -0.51
SRP54-202ENST00000546080 PSPNO60542 156 aa11.84□□□□□ -0.51
SRP54-202ENST00000546080 SUMO1P63165 101 aaKnown RBP11.84□□□□□ -0.51
SRP54-202ENST00000546080 TREML4Q6UXN2 200 aa11.84□□□□□ -0.51
SRP54-202ENST00000546080 SLC35E1Q96K37 410 aa11.84□□□□□ -0.51
SRP54-202ENST00000546080 RNF2Q99496 336 aa11.84□□□□□ -0.51
SRP54-202ENST00000546080 MGST2Q99735 147 aa11.84□□□□□ -0.51
SRP54-202ENST00000546080 GGTLC1Q9BX51 225 aa11.84□□□□□ -0.51
SRP54-202ENST00000546080 ZNF703Q9H7S9 590 aaPredicted RBP11.84□□□□□ -0.51
SRP54-202ENST00000546080 ESPL1Q14674 2120 aa11.83□□□□□ -0.52
SRP54-202ENST00000546080 LINC00473A8K010 186 aa11.83□□□□□ -0.52
SRP54-202ENST00000546080 IGHEP01854 428 aa11.83□□□□□ -0.52
SRP54-202ENST00000546080 GPX1P07203 203 aa11.83□□□□□ -0.52
SRP54-202ENST00000546080 OR9G9P0C7N8 305 aa11.83□□□□□ -0.52
SRP54-202ENST00000546080 HTD2P86397 168 aa11.83□□□□□ -0.52
SRP54-202ENST00000546080 SPATA45Q537H7 98 aa11.83□□□□□ -0.52
SRP54-202ENST00000546080 MMD2Q8IY49 270 aa11.83□□□□□ -0.52
SRP54-202ENST00000546080 WDR31Q8NA23 367 aa11.83□□□□□ -0.52
SRP54-202ENST00000546080 DNAJC4Q9NNZ3 241 aa11.83□□□□□ -0.52
SRP54-202ENST00000546080 TBL2Q9Y4P3 447 aaKnown RBP11.83□□□□□ -0.52
SRP54-202ENST00000546080 RNF114Q9Y508 228 aa11.83□□□□□ -0.52
SRP54-202ENST00000546080 C9JCJ5 164 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 AQP7O14520 342 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 GRPP07492 148 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 GCHFRP30047 84 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 CLDN18P56856 261 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 LINC00205P59089 165 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 AESQ08117 197 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 OR1C1Q15619 314 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 PPP1R32Q7Z5V6 425 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 SPEM1Q8N4L4 309 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 OR2M7Q8NG81 312 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 UHRF2Q96PU4 802 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 HSD17B10Q99714 261 aaKnown RBP11.82□□□□□ -0.52
SRP54-202ENST00000546080 GNB1LQ9BYB4 327 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 MS4A5Q9H3V2 200 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 GNB4Q9HAV0 340 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 SLC45A2Q9UMX9 530 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 COLQQ9Y215 455 aaPredicted RBP11.82□□□□□ -0.52
SRP54-202ENST00000546080 COL6A3P12111 3177 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 MT-CO2P00403 227 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 CELA3AP09093 270 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 FRMD6-AS1P0C7T7 363 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 AMTP48728 403 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 RPL19P84098 196 aaKnown RBP11.82□□□□□ -0.52
SRP54-202ENST00000546080 MMDQ15546 238 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 SLC35E4Q6ICL7 350 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 SPINK14Q6IE38 97 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 C1orf174Q8IYL3 243 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 OR8I2Q8N0Y5 310 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 Q8N976 141 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 MRGPRDQ8TDS7 321 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 EAF1Q96JC9 268 aaPredicted RBP11.82□□□□□ -0.52
SRP54-202ENST00000546080 LY96Q9Y6Y9 160 aa11.82□□□□□ -0.52
SRP54-202ENST00000546080 CTRLP40313 264 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 GABRA2P47869 451 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 PRAMEF5Q5TYX0 476 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 PRAMEF6Q5VXH4 476 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 MDP1Q86V88 176 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 STARD4Q96DR4 205 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 KCNS1Q96KK3 526 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 PHF7Q9BWX1 381 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms