RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 LEAP2Q969E1 77 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 WFIKKN1Q96NZ8 548 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 GNG12Q9UBI6 72 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 PCNX2A6NKB5 2137 aa13.12□□□□□ -0.31
LDLR-204ENST00000545707 IFNL4K9M1U5 179 aa13.12□□□□□ -0.31
LDLR-204ENST00000545707 GATCO43716 136 aaKnown RBP13.12□□□□□ -0.31
LDLR-204ENST00000545707 NDUFB4O95168 129 aa13.12□□□□□ -0.31
LDLR-204ENST00000545707 PRDX2P32119 198 aa13.12□□□□□ -0.31
LDLR-204ENST00000545707 DUTP33316 252 aaKnown RBP13.12□□□□□ -0.31
LDLR-204ENST00000545707 GNB1P62873 340 aa13.12□□□□□ -0.31
LDLR-204ENST00000545707 LRP11Q86VZ4 500 aa13.12□□□□□ -0.31
LDLR-204ENST00000545707 ZNF114Q8NC26 417 aa13.12□□□□□ -0.31
LDLR-204ENST00000545707 OR2Z1Q8NG97 314 aa13.12□□□□□ -0.31
LDLR-204ENST00000545707 SPINT2O43291 252 aa13.12□□□□□ -0.31
LDLR-204ENST00000545707 CD82P27701 267 aa13.12□□□□□ -0.31
LDLR-204ENST00000545707 ZNF134P52741 427 aa13.12□□□□□ -0.31
LDLR-204ENST00000545707 SMIM21Q3B7S5 101 aa13.12□□□□□ -0.31
LDLR-204ENST00000545707 ACOT6Q3I5F7 207 aaPredicted RBP13.12□□□□□ -0.31
LDLR-204ENST00000545707 PRAMEF5Q5TYX0 476 aa13.12□□□□□ -0.31
LDLR-204ENST00000545707 ABHD12Q8N2K0 398 aa13.12□□□□□ -0.31
LDLR-204ENST00000545707 FDCSPQ8NFU4 85 aa13.12□□□□□ -0.31
LDLR-204ENST00000545707 PRR7Q8TB68 274 aa13.12□□□□□ -0.31
LDLR-204ENST00000545707 LURAP1Q96LR2 239 aa13.12□□□□□ -0.31
LDLR-204ENST00000545707 HSD17B10Q99714 261 aaKnown RBP13.12□□□□□ -0.31
LDLR-204ENST00000545707 DUSP13Q9UII6 198 aa13.12□□□□□ -0.31
LDLR-204ENST00000545707 M0R1X1 148 aa13.11□□□□□ -0.31
LDLR-204ENST00000545707 C1QTNF9P0C862 333 aa13.11□□□□□ -0.31
LDLR-204ENST00000545707 HNF1AP20823 631 aa13.11□□□□□ -0.31
LDLR-204ENST00000545707 MSMPQ1L6U9 139 aa13.11□□□□□ -0.31
LDLR-204ENST00000545707 ZNRF1Q8ND25 227 aa13.11□□□□□ -0.31
LDLR-204ENST00000545707 OR2T10Q8NGZ9 312 aa13.11□□□□□ -0.31
LDLR-204ENST00000545707 WASF3Q9UPY6 502 aa13.11□□□□□ -0.31
LDLR-204ENST00000545707 ICE1Q9Y2F5 2266 aa13.11□□□□□ -0.31
LDLR-204ENST00000545707 C17orf112F2Z3M2 114 aa13.11□□□□□ -0.31
LDLR-204ENST00000545707 GZMBP10144 247 aa13.11□□□□□ -0.31
LDLR-204ENST00000545707 GCH1P30793 250 aa13.11□□□□□ -0.31
LDLR-204ENST00000545707 NUBP1P53384 320 aa13.11□□□□□ -0.31
LDLR-204ENST00000545707 FAM78BQ5VT40 261 aa13.11□□□□□ -0.31
LDLR-204ENST00000545707 C1orf229Q6ZS94 237 aaPredicted RBP13.11□□□□□ -0.31
LDLR-204ENST00000545707 OPN3Q9H1Y3 402 aaPredicted RBP13.11□□□□□ -0.31
LDLR-204ENST00000545707 HEATR1Q9H583 2144 aaKnown RBP13.11□□□□□ -0.31
LDLR-204ENST00000545707 HEYLQ9NQ87 328 aaPredicted RBP13.11□□□□□ -0.31
LDLR-204ENST00000545707 WDR83OSQ9Y284 106 aa13.11□□□□□ -0.31
LDLR-204ENST00000545707 IGKV1D-17A0A075B6S4 117 aa13.1□□□□□ -0.31
LDLR-204ENST00000545707 ZNF718Q3SXZ3 478 aa13.1□□□□□ -0.31
LDLR-204ENST00000545707 PLA2G2CQ5R387 149 aa13.1□□□□□ -0.31
LDLR-204ENST00000545707 MIC13Q5XKP0 118 aa13.1□□□□□ -0.31
LDLR-204ENST00000545707 A0A1W2PPV4 95 aa13.1□□□□□ -0.31
LDLR-204ENST00000545707 MORN2Q502X0 79 aa13.1□□□□□ -0.31
LDLR-204ENST00000545707 FAM201AQ5SY85 155 aa13.1□□□□□ -0.31
LDLR-204ENST00000545707 LINC01551Q86U37 167 aa13.1□□□□□ -0.31
LDLR-204ENST00000545707 OR4A16Q8NH70 328 aa13.1□□□□□ -0.31
LDLR-204ENST00000545707 EP300Q09472 2414 aaPredicted RBP13.09□□□□□ -0.31
LDLR-204ENST00000545707 IGHV2OR16-5A0A0B4J2B6 119 aa13.09□□□□□ -0.31
LDLR-204ENST00000545707 IGHV1-18A0A0C4DH31 117 aa13.09□□□□□ -0.31
LDLR-204ENST00000545707 A0A1B0GUS0 222 aa13.09□□□□□ -0.31
LDLR-204ENST00000545707 ZNF705GA8MUZ8 300 aaPredicted RBP13.09□□□□□ -0.31
LDLR-204ENST00000545707 SELLP14151 372 aa13.09□□□□□ -0.31
LDLR-204ENST00000545707 DDTP30046 118 aa13.09□□□□□ -0.31
LDLR-204ENST00000545707 GUSBP1Q15486 140 aa13.09□□□□□ -0.31
LDLR-204ENST00000545707 TREML4Q6UXN2 200 aa13.09□□□□□ -0.31
LDLR-204ENST00000545707 TGIF2LYQ8IUE0 185 aa13.09□□□□□ -0.31
LDLR-204ENST00000545707 SSMEM1Q8WWF3 244 aa13.09□□□□□ -0.31
LDLR-204ENST00000545707 MS4A5Q9H3V2 200 aa13.09□□□□□ -0.31
LDLR-204ENST00000545707 RP1L1Q8IWN7 2480 aaPredicted RBP13.09□□□□□ -0.31
LDLR-204ENST00000545707 DMXL1Q9Y485 3027 aa13.09□□□□□ -0.31
LDLR-204ENST00000545707 A0A087X0M5 115 aa13.09□□□□□ -0.31
LDLR-204ENST00000545707 A0A1B0GX30 115 aa13.09□□□□□ -0.31
LDLR-204ENST00000545707 AQP7O14520 342 aa13.09□□□□□ -0.31
LDLR-204ENST00000545707 SLC31A2O15432 143 aa13.09□□□□□ -0.31
LDLR-204ENST00000545707 KITLGP21583 273 aa13.09□□□□□ -0.31
LDLR-204ENST00000545707 PKIAP61925 76 aa13.09□□□□□ -0.31
LDLR-204ENST00000545707 TMEM170AQ8WVE7 144 aa13.09□□□□□ -0.31
LDLR-204ENST00000545707 ANAPC16Q96DE5 110 aa13.09□□□□□ -0.31
LDLR-204ENST00000545707 INTS1Q8N201 2190 aaKnown RBP13.08□□□□□ -0.31
LDLR-204ENST00000545707 TRBV20OR9-2A0A075B6H5 130 aa13.08□□□□□ -0.32
LDLR-204ENST00000545707 ADH4P08319 380 aa13.08□□□□□ -0.32
LDLR-204ENST00000545707 ARL14EPLP0DKL9 152 aa13.08□□□□□ -0.32
LDLR-204ENST00000545707 JOSD1Q15040 202 aaPredicted RBP13.08□□□□□ -0.32
LDLR-204ENST00000545707 MGST2Q99735 147 aa13.08□□□□□ -0.32
LDLR-204ENST00000545707 HCFC1P51610 2035 aa13.08□□□□□ -0.32
LDLR-204ENST00000545707 A0A0U1RQK1 487 aa13.08□□□□□ -0.32
LDLR-204ENST00000545707 RBFOX2O43251 390 aaKnown RBP eCLIP13.08□□□□□ -0.32
LDLR-204ENST00000545707 GGCTO75223 188 aaKnown RBP13.08□□□□□ -0.32
LDLR-204ENST00000545707 IGHG3P01860 377 aa13.08□□□□□ -0.32
LDLR-204ENST00000545707 IL3RAP26951 378 aa13.08□□□□□ -0.32
LDLR-204ENST00000545707 HTD2P86397 168 aa13.08□□□□□ -0.32
LDLR-204ENST00000545707 ACTL10Q5JWF8 245 aa13.08□□□□□ -0.32
LDLR-204ENST00000545707 TCTEX1D1Q8N7M0 179 aa13.08□□□□□ -0.32
LDLR-204ENST00000545707 TSTD3H0UI37 97 aa13.07□□□□□ -0.32
LDLR-204ENST00000545707 HPRT1P00492 218 aa13.07□□□□□ -0.32
LDLR-204ENST00000545707 MYOD1P15172 320 aa13.07□□□□□ -0.32
LDLR-204ENST00000545707 WT1P19544 449 aaPredicted RBP13.07□□□□□ -0.32
LDLR-204ENST00000545707 ZNF600Q6ZNG1 722 aa13.07□□□□□ -0.32
LDLR-204ENST00000545707 PTPRBP23467 1997 aa13.07□□□□□ -0.32
LDLR-204ENST00000545707 MGAQ8IWI9 3026 aa13.07□□□□□ -0.32
LDLR-204ENST00000545707 A0A1B0GV90 55 aa13.07□□□□□ -0.32
LDLR-204ENST00000545707 ZNF320A2RRD8 509 aa13.07□□□□□ -0.32
LDLR-204ENST00000545707 SPCS3P61009 180 aa13.07□□□□□ -0.32
LDLR-204ENST00000545707 PDLIM3Q53GG5 364 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms