RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 LCN2P80188 198 aa10.65□□□□□ -0.7
COL4A6-209ENST00000545689 TWIST1Q15672 202 aa10.65□□□□□ -0.7
COL4A6-209ENST00000545689 OR10J6PQ8NGY7 276 aa10.65□□□□□ -0.7
COL4A6-209ENST00000545689 OSR1Q8TAX0 266 aaPredicted RBP10.65□□□□□ -0.7
COL4A6-209ENST00000545689 SLC25A28Q96A46 364 aa10.65□□□□□ -0.7
COL4A6-209ENST00000545689 RAMP1O60894 148 aa10.65□□□□□ -0.7
COL4A6-209ENST00000545689 ABHD12Q8N2K0 398 aa10.65□□□□□ -0.7
COL4A6-209ENST00000545689 SFRP2Q96HF1 295 aa10.65□□□□□ -0.7
COL4A6-209ENST00000545689 CLEC7AQ9BXN2 247 aa10.65□□□□□ -0.7
COL4A6-209ENST00000545689 URB1O60287 2271 aaKnown RBP10.65□□□□□ -0.71
COL4A6-209ENST00000545689 TRAV9-1A0A075B6T8 112 aa10.65□□□□□ -0.71
COL4A6-209ENST00000545689 CA7P43166 264 aa10.65□□□□□ -0.71
COL4A6-209ENST00000545689 DNM1P46Q6ZS02 220 aa10.65□□□□□ -0.71
COL4A6-209ENST00000545689 DMRT1Q9Y5R6 373 aa10.65□□□□□ -0.71
COL4A6-209ENST00000545689 RNF222A6NCQ9 220 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 B9A039 149 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 CIDEAO60543 219 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 RPL7P18124 248 aaKnown RBP10.64□□□□□ -0.71
COL4A6-209ENST00000545689 NABP2Q9BQ15 211 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 TRAV14DV4A0A0A6YYC5 116 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 MEGF10Q96KG7 1140 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 C18orf12Q96KH6 178 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 NPCDR1Q9BY65 106 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 LPAR2Q9HBW0 351 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 PPIAL4CA0A0B4J2A2 164 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 NPIPB7O75200 414 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 RFPL3SP0C7P2 107 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 PPIAL4GP0DN37 164 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 RABAC1Q9UI14 185 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 IGHV3-21A0A0B4J1V1 117 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 C17orf51A8MQB3 221 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 IQCF6A8MYZ5 107 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 WNT9BO14905 357 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 NUBP1P53384 320 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 ZNF362Q5T0B9 420 aaPredicted RBP10.64□□□□□ -0.71
COL4A6-209ENST00000545689 NR2C2APQ86WQ0 139 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 AP5S1Q9NUS5 200 aa10.64□□□□□ -0.71
COL4A6-209ENST00000545689 SLC25A17O43808 307 aa10.63□□□□□ -0.71
COL4A6-209ENST00000545689 LINC00271P0C7V0 271 aa10.63□□□□□ -0.71
COL4A6-209ENST00000545689 APELAP0DMC3 54 aa10.63□□□□□ -0.71
COL4A6-209ENST00000545689 LOXL3P58215 753 aa10.63□□□□□ -0.71
COL4A6-209ENST00000545689 SYT8Q8NBV8 401 aa10.63□□□□□ -0.71
COL4A6-209ENST00000545689 ZNF25P17030 456 aaPredicted RBP10.63□□□□□ -0.71
COL4A6-209ENST00000545689 TGIF1Q15583 401 aa10.63□□□□□ -0.71
COL4A6-209ENST00000545689 UQCR10Q9UDW1 63 aa10.63□□□□□ -0.71
COL4A6-209ENST00000545689 GAS1P54826 345 aa10.63□□□□□ -0.71
COL4A6-209ENST00000545689 FAM89BQ8N5H3 189 aa10.63□□□□□ -0.71
COL4A6-209ENST00000545689 RCC1LQ96I51 464 aaKnown RBP10.63□□□□□ -0.71
COL4A6-209ENST00000545689 IL17BQ9UHF5 180 aa10.63□□□□□ -0.71
COL4A6-209ENST00000545689 C12orf77C9JDV5 145 aa10.63□□□□□ -0.71
COL4A6-209ENST00000545689 MAS1LP35410 378 aa10.63□□□□□ -0.71
COL4A6-209ENST00000545689 SPATA45Q537H7 98 aa10.63□□□□□ -0.71
COL4A6-209ENST00000545689 CLEC2AQ6UVW9 174 aa10.63□□□□□ -0.71
COL4A6-209ENST00000545689 LIPFP07098 398 aa10.63□□□□□ -0.71
COL4A6-209ENST00000545689 SRSF7Q16629 238 aaKnown RBP eCLIP10.63□□□□□ -0.71
COL4A6-209ENST00000545689 HCP5Q6MZN7 132 aa10.63□□□□□ -0.71
COL4A6-209ENST00000545689 RALYQ9UKM9 306 aaKnown RBP10.63□□□□□ -0.71
COL4A6-209ENST00000545689 IGHV1-69-2A0A0G2JMI3 117 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 ID4P47928 161 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 PSMB2P49721 201 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 DLX1P56177 255 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 MEF2CQ06413 473 aaPredicted RBP10.62□□□□□ -0.71
COL4A6-209ENST00000545689 C12orf54Q6X4T0 127 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 TUBA4BQ9H853 241 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 IL6RP08887 468 aaPredicted RBP10.62□□□□□ -0.71
COL4A6-209ENST00000545689 TMEM177Q53S58 311 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 CYP2G1PQ6ZSU1 146 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 RTN4RL2Q86UN3 420 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 TMEM183AQ8IXX5 376 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 SIGLEC12Q96PQ1 595 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 PMCHL2Q9BQD1 86 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 DCAF16Q9NXF7 216 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 HILPDAQ9Y5L2 63 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 TRBV23-1A0A0A0MS06 115 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 MSGN1A6NI15 193 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 SLC35B1P78383 322 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 DYNLRB2Q8TF09 96 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 TMSB15BA0A087X1C1 80 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 F8VVB4 439 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 F8VWA3 439 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 EIF3GO75821 320 aaKnown RBP eCLIP10.62□□□□□ -0.71
COL4A6-209ENST00000545689 TRGC1P0CF51 173 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 MDKP21741 143 aaPredicted RBP10.62□□□□□ -0.71
COL4A6-209ENST00000545689 SSTR5P35346 364 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 GFRA1P56159 465 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 ZNF385CQ66K41 422 aaPredicted RBP10.62□□□□□ -0.71
COL4A6-209ENST00000545689 C16orf92Q96LL3 132 aa10.62□□□□□ -0.71
COL4A6-209ENST00000545689 TMEM238LA0A1B0GVL6 79 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 A6NJY4 79 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 NPIPB11E5RHQ5 1161 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 CRYBB3P26998 211 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 WDR25Q64LD2 544 aaPredicted RBP10.61□□□□□ -0.71
COL4A6-209ENST00000545689 EBLN2Q6P2I7 272 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 SRP19P09132 144 aaKnown RBP10.61□□□□□ -0.71
COL4A6-209ENST00000545689 FOLR2P14207 255 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 SRSF9Q13242 221 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL4A6-209ENST00000545689 MAP1LC3AQ9H492 121 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 TRBV6-7A0A0A0MS04 114 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 C5orf52A6NGY3 159 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 SIGLEC5O15389 551 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms