RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 ODF3L1Q8IXM7 274 aa11.37□□□□□ -0.59
CLSTN3-216ENST00000545663 FAM89BQ8N5H3 189 aa11.37□□□□□ -0.59
CLSTN3-216ENST00000545663 BVESQ8NE79 360 aa11.37□□□□□ -0.59
CLSTN3-216ENST00000545663 OR52B4Q8NGK2 314 aa11.37□□□□□ -0.59
CLSTN3-216ENST00000545663 FAM46BQ96A09 425 aa11.37□□□□□ -0.59
CLSTN3-216ENST00000545663 BANF2Q9H503 90 aa11.37□□□□□ -0.59
CLSTN3-216ENST00000545663 RAB9BQ9NP90 201 aa11.37□□□□□ -0.59
CLSTN3-216ENST00000545663 BATF3Q9NR55 127 aa11.37□□□□□ -0.59
CLSTN3-216ENST00000545663 RCC2Q9P258 522 aaKnown RBP11.37□□□□□ -0.59
CLSTN3-216ENST00000545663 GNG12Q9UBI6 72 aa11.37□□□□□ -0.59
CLSTN3-216ENST00000545663 HSF4Q9ULV5 492 aa11.37□□□□□ -0.59
CLSTN3-216ENST00000545663 SPATA2Q9UM82 520 aa11.37□□□□□ -0.59
CLSTN3-216ENST00000545663 TMEM272A0A1B0GTI8 110 aa11.36□□□□□ -0.59
CLSTN3-216ENST00000545663 TMEM30CPA0ZSE6 113 aa11.36□□□□□ -0.59
CLSTN3-216ENST00000545663 CLDN12P56749 244 aa11.36□□□□□ -0.59
CLSTN3-216ENST00000545663 UNC119Q13432 240 aa11.36□□□□□ -0.59
CLSTN3-216ENST00000545663 TM4SF20Q53R12 229 aa11.36□□□□□ -0.59
CLSTN3-216ENST00000545663 TMEM61Q8N0U2 210 aa11.36□□□□□ -0.59
CLSTN3-216ENST00000545663 GRPEL2Q8TAA5 225 aa11.36□□□□□ -0.59
CLSTN3-216ENST00000545663 NEK7Q8TDX7 302 aa11.36□□□□□ -0.59
CLSTN3-216ENST00000545663 DGCR14Q96DF8 476 aaKnown RBP11.36□□□□□ -0.59
CLSTN3-216ENST00000545663 NAA50Q9GZZ1 169 aaKnown RBP11.36□□□□□ -0.59
CLSTN3-216ENST00000545663 LPAR5Q9H1C0 372 aa11.36□□□□□ -0.59
CLSTN3-216ENST00000545663 RIMS4Q9H426 269 aaPredicted RBP11.36□□□□□ -0.59
CLSTN3-216ENST00000545663 FBXL7Q9UJT9 491 aa11.36□□□□□ -0.59
CLSTN3-216ENST00000545663 A0A1W2PP11 408 aa11.35□□□□□ -0.59
CLSTN3-216ENST00000545663 C2orf70A6NJV1 201 aa11.35□□□□□ -0.59
CLSTN3-216ENST00000545663 C16orf90A8MZG2 172 aa11.35□□□□□ -0.59
CLSTN3-216ENST00000545663 H3BMQ9 156 aa11.35□□□□□ -0.59
CLSTN3-216ENST00000545663 BMPR1BO00238 502 aa11.35□□□□□ -0.59
CLSTN3-216ENST00000545663 ORC5O43913 435 aa11.35□□□□□ -0.59
CLSTN3-216ENST00000545663 CA2P00918 260 aa11.35□□□□□ -0.59
CLSTN3-216ENST00000545663 CLEC2LP0C7M8 214 aa11.35□□□□□ -0.59
CLSTN3-216ENST00000545663 APOC4P55056 127 aa11.35□□□□□ -0.59
CLSTN3-216ENST00000545663 Q3ZCU0 254 aa11.35□□□□□ -0.59
CLSTN3-216ENST00000545663 TMEM177Q53S58 311 aa11.35□□□□□ -0.59
CLSTN3-216ENST00000545663 C5orf24Q7Z6I8 188 aa11.35□□□□□ -0.59
CLSTN3-216ENST00000545663 PRR18Q8N4B5 295 aa11.35□□□□□ -0.59
CLSTN3-216ENST00000545663 OR1L1Q8NH94 360 aa11.35□□□□□ -0.59
CLSTN3-216ENST00000545663 CACNG8Q8WXS5 425 aa11.35□□□□□ -0.59
CLSTN3-216ENST00000545663 DIABLOQ9NR28 239 aa11.35□□□□□ -0.59
CLSTN3-216ENST00000545663 PLEKHJ1Q9NW61 149 aa11.35□□□□□ -0.59
CLSTN3-216ENST00000545663 CCDC59Q9P031 241 aaKnown RBP11.35□□□□□ -0.59
CLSTN3-216ENST00000545663 PEX16Q9Y5Y5 336 aa11.35□□□□□ -0.59
CLSTN3-216ENST00000545663 SMIM30A4D0T7 59 aa11.34□□□□□ -0.59
CLSTN3-216ENST00000545663 SCAF4O95104 1147 aaKnown RBP11.34□□□□□ -0.59
CLSTN3-216ENST00000545663 MFAP2P55001 183 aa11.34□□□□□ -0.59
CLSTN3-216ENST00000545663 MRPS15P82914 257 aaKnown RBP11.34□□□□□ -0.59
CLSTN3-216ENST00000545663 UBE2NLQ5JXB2 153 aa11.34□□□□□ -0.59
CLSTN3-216ENST00000545663 OR10K2Q6IF99 312 aa11.34□□□□□ -0.59
CLSTN3-216ENST00000545663 TRAT1Q6PIZ9 186 aa11.34□□□□□ -0.59
CLSTN3-216ENST00000545663 FAM131AQ6UXB0 335 aa11.34□□□□□ -0.59
CLSTN3-216ENST00000545663 ZNF562Q6V9R5 426 aa11.34□□□□□ -0.59
CLSTN3-216ENST00000545663 ZNF554Q86TJ5 538 aa11.34□□□□□ -0.59
CLSTN3-216ENST00000545663 LGALS14Q8TCE9 139 aa11.34□□□□□ -0.59
CLSTN3-216ENST00000545663 SNAPC3Q92966 411 aa11.34□□□□□ -0.59
CLSTN3-216ENST00000545663 S100A16Q96FQ6 103 aaKnown RBP11.34□□□□□ -0.59
CLSTN3-216ENST00000545663 MFFQ9GZY8 342 aa11.34□□□□□ -0.59
CLSTN3-216ENST00000545663 RHBDL2Q9NX52 303 aa11.34□□□□□ -0.59
CLSTN3-216ENST00000545663 MGAT4AQ9UM21 535 aa11.34□□□□□ -0.59
CLSTN3-216ENST00000545663 DEFB4AO15263 64 aa11.33□□□□□ -0.6
CLSTN3-216ENST00000545663 APOA1P02647 267 aa11.33□□□□□ -0.6
CLSTN3-216ENST00000545663 MT-ND4P03905 459 aa11.33□□□□□ -0.6
CLSTN3-216ENST00000545663 FCGR2BP31994 310 aaPredicted RBP11.33□□□□□ -0.6
CLSTN3-216ENST00000545663 TGFBR1P36897 503 aa11.33□□□□□ -0.6
CLSTN3-216ENST00000545663 GNMTQ14749 295 aa11.33□□□□□ -0.6
CLSTN3-216ENST00000545663 OR10R2Q8NGX6 335 aa11.33□□□□□ -0.6
CLSTN3-216ENST00000545663 C15orf40Q8WUR7 153 aa11.33□□□□□ -0.6
CLSTN3-216ENST00000545663 RAB3CQ96E17 227 aa11.33□□□□□ -0.6
CLSTN3-216ENST00000545663 RBM38Q9H0Z9 239 aaKnown RBP11.33□□□□□ -0.6
CLSTN3-216ENST00000545663 ATG5Q9H1Y0 275 aa11.33□□□□□ -0.6
CLSTN3-216ENST00000545663 H3BUA1 57 aa11.32□□□□□ -0.6
CLSTN3-216ENST00000545663 UBE2CO00762 179 aa11.32□□□□□ -0.6
CLSTN3-216ENST00000545663 HBZP02008 142 aa11.32□□□□□ -0.6
CLSTN3-216ENST00000545663 RPL35AP18077 110 aaKnown RBP11.32□□□□□ -0.6
CLSTN3-216ENST00000545663 AADACP22760 399 aa11.32□□□□□ -0.6
CLSTN3-216ENST00000545663 FXYD3Q14802 87 aa11.32□□□□□ -0.6
CLSTN3-216ENST00000545663 SPCS2Q15005 226 aa11.32□□□□□ -0.6
CLSTN3-216ENST00000545663 TMEM30BQ3MIR4 351 aa11.32□□□□□ -0.6
CLSTN3-216ENST00000545663 STEAP3Q658P3 488 aa11.32□□□□□ -0.6
CLSTN3-216ENST00000545663 GLDNQ6ZMI3 551 aaPredicted RBP11.32□□□□□ -0.6
CLSTN3-216ENST00000545663 MOB1BQ7L9L4 216 aa11.32□□□□□ -0.6
CLSTN3-216ENST00000545663 STPG3Q8N7X2 389 aa11.32□□□□□ -0.6
CLSTN3-216ENST00000545663 DYNC2LI1Q8TCX1 351 aa11.32□□□□□ -0.6
CLSTN3-216ENST00000545663 TINAGL1Q9GZM7 467 aaPredicted RBP11.32□□□□□ -0.6
CLSTN3-216ENST00000545663 TECRQ9NZ01 308 aaKnown RBP11.32□□□□□ -0.6
CLSTN3-216ENST00000545663 RABL2AQ9UBK7 228 aaPredicted RBP11.32□□□□□ -0.6
CLSTN3-216ENST00000545663 METTL1Q9UBP6 276 aaKnown RBP11.32□□□□□ -0.6
CLSTN3-216ENST00000545663 RABL2BQ9UNT1 228 aa11.32□□□□□ -0.6
CLSTN3-216ENST00000545663 A0A075B6Q4 140 aa11.31□□□□□ -0.6
CLSTN3-216ENST00000545663 A0A0B4J203 849 aa11.31□□□□□ -0.6
CLSTN3-216ENST00000545663 RAB27BO00194 218 aa11.31□□□□□ -0.6
CLSTN3-216ENST00000545663 HLA-AP01891 365 aaKnown RBP11.31□□□□□ -0.6
CLSTN3-216ENST00000545663 GSTP1P09211 210 aaKnown RBP11.31□□□□□ -0.6
CLSTN3-216ENST00000545663 TALDO1P37837 337 aa11.31□□□□□ -0.6
CLSTN3-216ENST00000545663 SSBP2P81877 361 aaPredicted RBP11.31□□□□□ -0.6
CLSTN3-216ENST00000545663 PSG5Q15238 335 aa11.31□□□□□ -0.6
CLSTN3-216ENST00000545663 MORN2Q502X0 79 aa11.31□□□□□ -0.6
CLSTN3-216ENST00000545663 C6orf183Q5T699 404 aa11.31□□□□□ -0.6
CLSTN3-216ENST00000545663 SIGIRRQ6IA17 410 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms