RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 LOC102724200A0A096LPH7 203 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-222ENST00000545308 IGHV3-49A0A0A0MS15 119 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 IGKV1-6A0A0C4DH72 117 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 A0A1B0GXF2 115 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 RBFOX3A6NFN3 312 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 SULT1C2O00338 296 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 TOR1AO14656 332 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 OR1I1O60431 355 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 GATBO75879 557 aaKnown RBP2.48□□□□□ -2.01
SNHG1-222ENST00000545308 VAMP5O95183 116 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 IGKV1-39P01597 117 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 RLN2P04090 185 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 CD74P04233 296 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 IGKV1D-39P04432 117 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 SOD3P08294 240 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 ZNF708P17019 499 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 TAC1P20366 129 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 KDELR2P33947 212 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 RPL22P35268 128 aaKnown RBP2.48□□□□□ -2.01
SNHG1-222ENST00000545308 SLCO1A2P46721 670 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 DSCR4P56555 118 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-222ENST00000545308 BTN3A2P78410 334 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 ELF3P78545 371 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-222ENST00000545308 FLOT2Q14254 428 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 TRIP13Q15645 432 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-222ENST00000545308 CEACAM21Q3KPI0 293 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 LINC00483Q53H64 154 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 HSP90B2PQ58FF3 399 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 OR10J3Q5JRS4 329 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 AGTRAPQ6RW13 159 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 ZNF550Q7Z398 422 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 SPATA24Q86W54 205 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 PLCZ1Q86YW0 608 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 KRT222Q8N1A0 295 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 MUC15Q8N387 334 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 SLC25A29Q8N8R3 303 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 ZNF738Q8NE65 137 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 MNS1Q8NEH6 495 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 ZNF721Q8TF20 911 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 NAT14Q8WUY8 206 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 BLNKQ8WV28 456 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 C17orf50Q8WW18 174 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 SLC25A46Q96AG3 418 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 RSPO3Q9BXY4 272 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-222ENST00000545308 METTL17Q9H7H0 456 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-222ENST00000545308 RNF122Q9H9V4 155 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 C21orf62Q9NYP8 219 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 KLK12Q9UKR0 248 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 MCTS1Q9ULC4 181 aaKnown RBP2.48□□□□□ -2.01
SNHG1-222ENST00000545308 RFNGQ9Y644 331 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 USH1CQ9Y6N9 552 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 PRR14LQ5THK1 2151 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 PLCE1Q9P212 2302 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 NUP214P35658 2090 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-222ENST00000545308 SVEP1Q4LDE5 3571 aa2.48□□□□□ -2.01
SNHG1-222ENST00000545308 ZNF860A6NHJ4 632 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 OR2AT4A6NND4 320 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 CCL22O00626 93 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 ACOX3O15254 700 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 CRYBA1P05813 215 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 M6PRP20645 277 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 OGNP20774 298 aaKnown RBP2.47□□□□□ -2.01
SNHG1-222ENST00000545308 IMPA1P29218 277 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 RAB8AP61006 207 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 RAB31Q13636 194 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 COTL1Q14019 142 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 CCSMST1Q4G0I0 132 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 LUZP6Q538Z0 58 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 TIMM23BQ5SRD1 257 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 SBSNQ6UWP8 590 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 TIFABQ6ZNK6 161 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 TRMT10CQ7L0Y3 403 aaKnown RBP2.47□□□□□ -2.01
SNHG1-222ENST00000545308 MRPL52Q86TS9 123 aaKnown RBP2.47□□□□□ -2.01
SNHG1-222ENST00000545308 ZNF101Q8IZC7 436 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 NECAP1Q8NC96 275 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 RNASEH2CQ8TDP1 164 aaKnown RBP2.47□□□□□ -2.01
SNHG1-222ENST00000545308 L3HYPDHQ96EM0 354 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 CYYR1Q96J86 154 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 APOL4Q9BPW4 351 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 CHCHD7Q9BUK0 85 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 SRRQ9GZT4 340 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 SND1-IT1Q9HBX3 110 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 PROK2Q9HC23 129 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 TAS2R13Q9NYV9 303 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 TAS2R5Q9NYW4 299 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 DNAJC27Q9NZQ0 273 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 OPN4Q9UHM6 478 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 DKKL1Q9UK85 242 aa2.47□□□□□ -2.01
SNHG1-222ENST00000545308 ANK3Q12955 4377 aaKnown RBP2.47□□□□□ -2.01
SNHG1-222ENST00000545308 hCG_1818297A0A087WSY0 165 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 A0A087X0T9 212 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 A0A096LNT2 108 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 A0A0G2JMM0 328 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 A0A0G2JMP0 313 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 A0A0X1KG70 313 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 A0A1W2PPB8 328 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 A0A1W2PRS3 328 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 TMEM72A0PK05 275 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 OR51F1A6NGY5 319 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 OR6C70A6NIJ9 312 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms