RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 CORO2AQ92828 525 aa10.33□□□□□ -0.76
PAAF1-215ENST00000544909 ZDHHC16Q969W1 377 aa10.33□□□□□ -0.76
PAAF1-215ENST00000544909 IMMP2LQ96T52 175 aa10.33□□□□□ -0.76
PAAF1-215ENST00000544909 PARD6AQ9NPB6 346 aa10.33□□□□□ -0.76
PAAF1-215ENST00000544909 DUSP13Q9UII6 198 aa10.33□□□□□ -0.76
PAAF1-215ENST00000544909 FOXA2Q9Y261 457 aaPredicted RBP10.33□□□□□ -0.76
PAAF1-215ENST00000544909 INTS1Q8N201 2190 aaKnown RBP10.32□□□□□ -0.76
PAAF1-215ENST00000544909 GTF3C1Q12789 2109 aa10.32□□□□□ -0.76
PAAF1-215ENST00000544909 C15orf61A6NNL5 157 aa10.32□□□□□ -0.76
PAAF1-215ENST00000544909 FCGR3BO75015 233 aa10.32□□□□□ -0.76
PAAF1-215ENST00000544909 EGR1P18146 543 aa10.32□□□□□ -0.76
PAAF1-215ENST00000544909 CEACAM8P31997 349 aaPredicted RBP10.32□□□□□ -0.76
PAAF1-215ENST00000544909 LCN2P80188 198 aa10.32□□□□□ -0.76
PAAF1-215ENST00000544909 RELBQ01201 579 aa10.32□□□□□ -0.76
PAAF1-215ENST00000544909 EDDM3AQ14507 147 aa10.32□□□□□ -0.76
PAAF1-215ENST00000544909 ZNF343Q6P1L6 599 aa10.32□□□□□ -0.76
PAAF1-215ENST00000544909 NANPQ8TBE9 248 aa10.32□□□□□ -0.76
PAAF1-215ENST00000544909 OR5B12Q96R08 314 aa10.32□□□□□ -0.76
PAAF1-215ENST00000544909 PARLQ9H300 379 aa10.32□□□□□ -0.76
PAAF1-215ENST00000544909 SLC25A22Q9H936 323 aa10.32□□□□□ -0.76
PAAF1-215ENST00000544909 GFOD1Q9NXC2 390 aa10.32□□□□□ -0.76
PAAF1-215ENST00000544909 RNF7Q9UBF6 113 aa10.32□□□□□ -0.76
PAAF1-215ENST00000544909 PITPNC1Q9UKF7 332 aa10.32□□□□□ -0.76
PAAF1-215ENST00000544909 ZNF257Q9Y2Q1 563 aa10.32□□□□□ -0.76
PAAF1-215ENST00000544909 TRGV10A0A0A0MS01 117 aa10.31□□□□□ -0.76
PAAF1-215ENST00000544909 TGIF2-C20orf24A0A0A6YYL0 155 aa10.31□□□□□ -0.76
PAAF1-215ENST00000544909 IGHV3-64DA0A0J9YX35 117 aa10.31□□□□□ -0.76
PAAF1-215ENST00000544909 SPAARA0A1B0GVQ0 90 aa10.31□□□□□ -0.76
PAAF1-215ENST00000544909 ZNF729A6NN14 1252 aaPredicted RBP10.31□□□□□ -0.76
PAAF1-215ENST00000544909 M0R1X1 148 aa10.31□□□□□ -0.76
PAAF1-215ENST00000544909 PHOX2AO14813 284 aa10.31□□□□□ -0.76
PAAF1-215ENST00000544909 GFRA3O60609 400 aa10.31□□□□□ -0.76
PAAF1-215ENST00000544909 TYMSP04818 313 aa10.31□□□□□ -0.76
PAAF1-215ENST00000544909 PFN1P07737 140 aaKnown RBP10.31□□□□□ -0.76
PAAF1-215ENST00000544909 CD55P08174 381 aa10.31□□□□□ -0.76
PAAF1-215ENST00000544909 OR9G9P0C7N8 305 aa10.31□□□□□ -0.76
PAAF1-215ENST00000544909 SRP14P37108 136 aaKnown RBP10.31□□□□□ -0.76
PAAF1-215ENST00000544909 FAM3BP58499 235 aaPredicted RBP10.31□□□□□ -0.76
PAAF1-215ENST00000544909 COA6Q5JTJ3 125 aaKnown RBP10.31□□□□□ -0.76
PAAF1-215ENST00000544909 STUMQ69YW2 141 aa10.31□□□□□ -0.76
PAAF1-215ENST00000544909 ZNF474Q6S9Z5 364 aaPredicted RBP10.31□□□□□ -0.76
PAAF1-215ENST00000544909 OR51G1Q8NGK1 321 aa10.31□□□□□ -0.76
PAAF1-215ENST00000544909 RFESDQ8TAC1 157 aa10.31□□□□□ -0.76
PAAF1-215ENST00000544909 QTRT1Q9BXR0 403 aaKnown RBP10.31□□□□□ -0.76
PAAF1-215ENST00000544909 TMEM14BQ9NUH8 114 aa10.31□□□□□ -0.76
PAAF1-215ENST00000544909 LSM4Q9Y4Z0 139 aaKnown RBP10.31□□□□□ -0.76
PAAF1-215ENST00000544909 FAM215AQ9Y5M1 114 aa10.31□□□□□ -0.76
PAAF1-215ENST00000544909 URGCP-MRPS24S4R325 110 aa10.31□□□□□ -0.76
PAAF1-215ENST00000544909 H7BYZ3 331 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 HRASP01112 189 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 FABP1P07148 127 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 RPL23P62829 140 aaKnown RBP10.3□□□□□ -0.76
PAAF1-215ENST00000544909 TFF3Q07654 80 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 RAB31Q13636 194 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 TPRX1Q8N7U7 411 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 NIT2Q9NQR4 276 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 TMEM140Q9NV12 185 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 CACNA1DQ01668 2161 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 IGHV3-43A0A0B4J1X8 118 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 IFNA10P01566 189 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 TRGC2P03986 189 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 IGHV3-43DP0DP04 118 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 SRSF6Q13247 344 aaKnown RBP10.3□□□□□ -0.76
PAAF1-215ENST00000544909 TEX36Q5VZQ5 186 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 TREML4Q6UXN2 200 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 NPVFQ9HCQ7 196 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 HEYLQ9NQ87 328 aaPredicted RBP10.3□□□□□ -0.76
PAAF1-215ENST00000544909 GSN-AS1Q9NRJ2 163 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 PRNDQ9UKY0 176 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 FZR1Q9UM11 496 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 TCF19Q9Y242 345 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 DMRT1Q9Y5R6 373 aa10.3□□□□□ -0.76
PAAF1-215ENST00000544909 A0A1W2PPV4 95 aa10.29□□□□□ -0.76
PAAF1-215ENST00000544909 C11orf94C9JXX5 98 aa10.29□□□□□ -0.76
PAAF1-215ENST00000544909 M0R1B8 84 aa10.29□□□□□ -0.76
PAAF1-215ENST00000544909 GGCTO75223 188 aaKnown RBP10.29□□□□□ -0.76
PAAF1-215ENST00000544909 CXorf1O96002 111 aa10.29□□□□□ -0.76
PAAF1-215ENST00000544909 STAG3L2P0CL84 134 aa10.29□□□□□ -0.76
PAAF1-215ENST00000544909 STAG3L3P0CL85 134 aa10.29□□□□□ -0.76
PAAF1-215ENST00000544909 ZNF83P51522 516 aa10.29□□□□□ -0.76
PAAF1-215ENST00000544909 HSPE1P61604 102 aaKnown RBP10.29□□□□□ -0.76
PAAF1-215ENST00000544909 ADIRFQ15847 76 aa10.29□□□□□ -0.76
PAAF1-215ENST00000544909 MSMPQ1L6U9 139 aa10.29□□□□□ -0.76
PAAF1-215ENST00000544909 C17orf58Q2M2W7 97 aa10.29□□□□□ -0.76
PAAF1-215ENST00000544909 KCNIP4Q6PIL6 250 aa10.29□□□□□ -0.76
PAAF1-215ENST00000544909 MOGAT3Q86VF5 341 aa10.29□□□□□ -0.76
PAAF1-215ENST00000544909 ZNF439Q8NDP4 499 aa10.29□□□□□ -0.76
PAAF1-215ENST00000544909 OR4F5Q8NH21 305 aa10.29□□□□□ -0.76
PAAF1-215ENST00000544909 ACY3Q96HD9 319 aa10.29□□□□□ -0.76
PAAF1-215ENST00000544909 OR4F4Q96R69 305 aa10.29□□□□□ -0.76
PAAF1-215ENST00000544909 DEFB108AA8MXU0 73 aa10.28□□□□□ -0.76
PAAF1-215ENST00000544909 PPP5D1E7EU14 171 aa10.28□□□□□ -0.76
PAAF1-215ENST00000544909 MT-CO2P00403 227 aa10.28□□□□□ -0.76
PAAF1-215ENST00000544909 IL6RP08887 468 aaPredicted RBP10.28□□□□□ -0.76
PAAF1-215ENST00000544909 RPL29P47914 159 aaKnown RBP10.28□□□□□ -0.76
PAAF1-215ENST00000544909 ZNF788Q6ZQV5 615 aa10.28□□□□□ -0.76
PAAF1-215ENST00000544909 SLC16A13Q7RTY0 426 aa10.28□□□□□ -0.76
PAAF1-215ENST00000544909 HIST3H2BBQ8N257 126 aa10.28□□□□□ -0.76
PAAF1-215ENST00000544909 FAM57AQ8TBR7 257 aa10.28□□□□□ -0.76
PAAF1-215ENST00000544909 RHOVQ96L33 236 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms