RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	GYG2	O15488	501 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	GATB	O75879	557 aa	Known RBP	4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	SOX14	O95416	240 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR2H2	O95918	312 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	CSN2	P05814	226 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	CGB3	P0DN86	165 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	CGB7	P0DN87	165 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	PRKACA	P17612	351 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	CD1B	P29016	333 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	RBP2	P50120	134 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	HCCS	P53701	268 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	SRPX	P78539	464 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	ZNF816	Q0VGE8	651 aa	Predicted RBP	4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	GK3P	Q14409	553 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	C17orf58	Q2M2W7	97 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	DNAL1	Q4LDG9	190 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	MOB3B	Q86TA1	216 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585		Q8N9P0	234 aa	Predicted RBP	4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585		Q8N9W7	124 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	CHST4	Q8NCG5	386 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR4D5	Q8NGN0	318 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	MYOZ3	Q8TDC0	251 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	C10orf35	Q96D05	121 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	CMTM5	Q96DZ9	223 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	KCTD7	Q96MP8	289 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	BARHL1	Q9BZE3	327 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	LINC00574	Q9H8X3	128 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	HMG20A	Q9NP66	347 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	EXOSC4	Q9NPD3	245 aa	Known RBP	4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	ISYNA1	Q9NPH2	558 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	PLSCR3	Q9NRY6	295 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	IDI2-AS1	Q9NZ38	188 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR52A1	Q9UKL2	312 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	IKZF2	Q9UKS7	526 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	PSG11	Q9UQ72	335 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	GMPPB	Q9Y5P6	360 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585		V9GYQ6	96 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	IGKV1-27	A0A075B6S5	117 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	IGHV1-3	A0A0C4DH29	117 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	MPTX1	A8MV57	137 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	LINC01619	G3V211	115 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585		H3BSH0	61 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	SIRPB1	O00241	398 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	DEGS1	O15121	323 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	ENTPD6	O75354	484 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	WBP4	O75554	376 aa	Known RBP	4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	MOS	P00540	346 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	OR8U9	P0C7N5	309 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	GZMH	P20718	246 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	BCL3	P20749	454 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	CCL1	P22362	96 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	PRKACB	P22694	351 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	VHL	P40337	213 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	NPBWR2	P48146	333 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	RAB9A	P51151	201 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	TMEM50B	P56557	158 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	GINS1	Q14691	196 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	MOGAT2	Q3SYC2	334 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	BCL2L15	Q5TBC7	163 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	FAM71F2	Q6NXP2	309 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	ZNF322	Q6U7Q0	402 aa	Predicted RBP	4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	OR10X1	Q8NGY0	326 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	C11orf45	Q8TAV5	145 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	DNAJC9	Q8WXX5	260 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	FLYWCH2	Q96CP2	140 aa	Known RBP	4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	RAB3C	Q96E17	227 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	PELI1	Q96FA3	418 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	TUBA4B	Q9H853	241 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	REEP1	Q9H902	201 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	PLEKHA1	Q9HB21	404 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	RBFOX1	Q9NWB1	397 aa	Known RBP	4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	MRM2	Q9UI43	246 aa	Known RBP	4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	COPS3	Q9UNS2	423 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	ERGIC3	Q9Y282	383 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585		R4GMQ9	66 aa		4.58	□□□□□ -1.68
CPSF7-222	ENST00000544585	HSD17B6	O14756	317 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	SRSF10	O75494	262 aa	Known RBP	4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	SLC2A5	P22732	501 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	CNTFR	P26992	372 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	HTR1F	P30939	366 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	MAGEA2	P43356	314 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	MFAP2	P55001	183 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	PITPNA	Q00169	270 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	CDK5	Q00535	292 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	APOF	Q13790	326 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	DIAPH2-AS1	Q14236	149 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	OR2T5	Q6IEZ7	315 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	OR8G2P	Q6IF36	304 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585		Q8N6K4	173 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	BEST4	Q8NFU0	473 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	OR10G2	Q8NGC3	310 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	OR2T29	Q8NH02	315 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	PP6455	Q8WZ26	134 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	APOL4	Q9BPW4	351 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	NIPSNAP1	Q9BPW8	284 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	OSBPL10	Q9BXB5	764 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	CHST5	Q9GZS9	411 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	FAM192A	Q9GZU8	254 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	PARL	Q9H300	379 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	VCX	Q9H320	206 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms