RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 OR2Y1Q8NGV0 311 aa0.78□□□□□ -2.28
YBX3-214ENST00000544501 DDIT4LQ96D03 193 aa0.78□□□□□ -2.28
YBX3-214ENST00000544501 SLC19A3Q9BZV2 496 aa0.78□□□□□ -2.28
YBX3-214ENST00000544501 RAB1BQ9H0U4 201 aa0.78□□□□□ -2.28
YBX3-214ENST00000544501 GOLPH3Q9H4A6 298 aa0.78□□□□□ -2.28
YBX3-214ENST00000544501 CLEC2DQ9UHP7 191 aa0.78□□□□□ -2.28
YBX3-214ENST00000544501 FBXL3Q9UKT7 428 aa0.78□□□□□ -2.28
YBX3-214ENST00000544501 ROBO3Q96MS0 1386 aa0.78□□□□□ -2.28
YBX3-214ENST00000544501 IBTKQ9P2D0 1353 aaPredicted RBP0.78□□□□□ -2.28
YBX3-214ENST00000544501 COL4A2P08572 1712 aa0.78□□□□□ -2.29
YBX3-214ENST00000544501 STAB2Q8WWQ8 2551 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 PLECQ15149 4684 aaKnown RBP0.77□□□□□ -2.29
YBX3-214ENST00000544501 IGKV1-12A0A0C4DH73 117 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 SPAARA0A1B0GVQ0 90 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 A0A1W2PQL4 384 aaPredicted RBP0.77□□□□□ -2.29
YBX3-214ENST00000544501 IGSF23A1L1A6 192 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 RAB19A4D1S5 217 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 VPS37CA5D8V6 355 aaPredicted RBP0.77□□□□□ -2.29
YBX3-214ENST00000544501 C19orf71A6NCJ1 209 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 ERICH4A6NGS2 130 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 BOLA2-SMG1P6H3BVE0 249 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 PSMD11O00231 422 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 FABP7O15540 132 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 ZNF189O75820 626 aaPredicted RBP0.77□□□□□ -2.29
YBX3-214ENST00000544501 IGKV1D-12P01611 117 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 CYBAP13498 195 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 CPMP14384 443 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 AKR1C4P17516 323 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 NUP62P37198 522 aaPredicted RBP0.77□□□□□ -2.29
YBX3-214ENST00000544501 GABRA4P48169 554 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 AKR1C2P52895 323 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 CARD18P57730 90 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 SS18Q15532 418 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 BSXQ3C1V8 233 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 SDIM1Q6ZPB5 146 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 FAM19A3Q7Z5A8 133 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 MRPL52Q86TS9 123 aaKnown RBP0.77□□□□□ -2.29
YBX3-214ENST00000544501 TMEM25Q86YD3 366 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 TCAIMQ8N3R3 496 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 C2orf73Q8N5S3 287 aaPredicted RBP0.77□□□□□ -2.29
YBX3-214ENST00000544501 ZFAND2AQ8N6M9 145 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 CDRT4Q8N9R6 151 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 FAM45AQ8TCE6 357 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 TMEM239Q8WW34 195 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 GALMQ96C23 342 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 CAPZA3Q96KX2 299 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 PRSS27Q9BQR3 290 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 FAAP24Q9BTP7 215 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 TAPBPLQ9BX59 468 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 HINT2Q9BX68 163 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 PRRG3Q9BZD7 231 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 HEY1Q9Y5J3 304 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 ANKRD36CQ5JPF3 1778 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 SIPA1L1O43166 1804 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 SPAG17Q6Q759 2223 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 ASCC3Q8N3C0 2202 aaKnown RBP0.77□□□□□ -2.29
YBX3-214ENST00000544501 KMT2AQ03164 3969 aa0.77□□□□□ -2.29
YBX3-214ENST00000544501 DNAH10Q8IVF4 4471 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 DNAH7Q8WXX0 4024 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 DMBT1Q9UGM3 2413 aaPredicted RBP0.76□□□□□ -2.29
YBX3-214ENST00000544501 CNTRLQ7Z7A1 2325 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 PTPRBP23467 1997 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 PARP14Q460N5 1801 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 DNAH9Q9NYC9 4486 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 HUWE1Q7Z6Z7 4374 aaKnown RBP0.76□□□□□ -2.29
YBX3-214ENST00000544501 PTPRJQ12913 1337 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 MYO3BQ8WXR4 1341 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 C8orf87E5RJ46 101 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 F8VP50 259 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 TOR1AO14656 332 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 RAB36O95755 333 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 EPPINO95925 133 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 FBP1P09467 338 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 OR4A8P0C604 315 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 CCDC172P0C7W6 258 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 ZNF7P17097 686 aaPredicted RBP0.76□□□□□ -2.29
YBX3-214ENST00000544501 SPAM1P38567 509 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 MAGEA3P43357 314 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 RAB2AP61019 212 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 UBE2KP61086 200 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 ZNF117Q03924 483 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 TSPAN31Q12999 210 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 PRDX4Q13162 271 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 HTR4Q13639 388 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 OR9I1Q8NGQ6 314 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 LRRC20Q8TCA0 184 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 IFT81Q8WYA0 676 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 OR5P2Q8WZ92 322 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 TMBIM1Q969X1 311 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 MSANTD3Q96H12 275 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 PGLYRP3Q96LB9 341 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 ZNF251Q9BRH9 671 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 SMDT1Q9H4I9 107 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 MAT2BQ9NZL9 334 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 NXT1Q9UKK6 140 aaKnown RBP0.76□□□□□ -2.29
YBX3-214ENST00000544501 RBMX2Q9Y388 322 aaKnown RBP0.76□□□□□ -2.29
YBX3-214ENST00000544501 WASHC3Q9Y3C0 194 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 NEBP20929 6669 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 PKHD1P08F94 4074 aa0.76□□□□□ -2.29
YBX3-214ENST00000544501 DYNC1H1Q14204 4646 aaKnown RBP0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms