RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 C11orf94C9JXX5 98 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 DEFB4AO15263 64 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 S1PR2O95136 353 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 WNT4P56705 351 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 RPS11P62280 158 aaKnown RBP eCLIP8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 MED22Q15528 200 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 PRSS8Q16651 343 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 ODF3L2Q3SX64 289 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 ZNF585BQ52M93 769 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 GLT8D1Q68CQ7 371 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 C6orf201Q7Z4U5 140 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 TTC9CQ8N5M4 171 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 ZNF645Q8N7E2 425 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 NANOGP1Q8N7R0 232 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 ZNF485Q8NCK3 441 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 OR11H2Q8NH07 326 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 OR5B3Q8NH48 314 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 PTX4Q96A99 478 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 PGLYRP3Q96LB9 341 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 NEDD4LQ96PU5 975 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 SPAG8Q99932 426 aaPredicted RBP8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 CHMP1AQ9HD42 196 aaPredicted RBP8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 SCN3BQ9NY72 215 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 S4R3C0 116 aa8.28□□□□□ -1.08
AP000439.1-201ENST00000544004 TRBV5-7A0A0A0MS05 114 aa8.27□□□□□ -1.09
AP000439.1-201ENST00000544004 NAPSAO96009 420 aa8.27□□□□□ -1.09
AP000439.1-201ENST00000544004 C8orf88P0DMB2 117 aa8.27□□□□□ -1.09
AP000439.1-201ENST00000544004 UNQ9165/PRO28630Q6UXU0 137 aa8.27□□□□□ -1.09
AP000439.1-201ENST00000544004 IDO2Q6ZQW0 420 aa8.27□□□□□ -1.09
AP000439.1-201ENST00000544004 TEX45Q8NA69 505 aa8.27□□□□□ -1.09
AP000439.1-201ENST00000544004 MARC2Q969Z3 335 aa8.27□□□□□ -1.09
AP000439.1-201ENST00000544004 CCDC140Q96MF4 163 aa8.27□□□□□ -1.09
AP000439.1-201ENST00000544004 DERL3Q96Q80 235 aa8.27□□□□□ -1.09
AP000439.1-201ENST00000544004 CSTL1Q9H114 145 aa8.27□□□□□ -1.09
AP000439.1-201ENST00000544004 MRPL27Q9P0M9 148 aaKnown RBP8.27□□□□□ -1.09
AP000439.1-201ENST00000544004 IGHV4-4A0A075B6R2 117 aa8.26□□□□□ -1.09
AP000439.1-201ENST00000544004 ERICH4A6NGS2 130 aa8.26□□□□□ -1.09
AP000439.1-201ENST00000544004 MPTX1A8MV57 137 aa8.26□□□□□ -1.09
AP000439.1-201ENST00000544004 CDK1P06493 297 aa8.26□□□□□ -1.09
AP000439.1-201ENST00000544004 SCTP09683 121 aa8.26□□□□□ -1.09
AP000439.1-201ENST00000544004 AQP4P55087 323 aa8.26□□□□□ -1.09
AP000439.1-201ENST00000544004 UBE2KP61086 200 aa8.26□□□□□ -1.09
AP000439.1-201ENST00000544004 HLA-DRB3P79483 266 aa8.26□□□□□ -1.09
AP000439.1-201ENST00000544004 CBX3Q13185 183 aa8.26□□□□□ -1.09
AP000439.1-201ENST00000544004 VMA21Q3ZAQ7 101 aa8.26□□□□□ -1.09
AP000439.1-201ENST00000544004 C19orf35Q6ZS72 473 aa8.26□□□□□ -1.09
AP000439.1-201ENST00000544004 MOB1BQ7L9L4 216 aa8.26□□□□□ -1.09
AP000439.1-201ENST00000544004 NRG4Q8WWG1 115 aa8.26□□□□□ -1.09
AP000439.1-201ENST00000544004 SPIN2AQ99865 258 aa8.26□□□□□ -1.09
AP000439.1-201ENST00000544004 SPIN2BQ9BPZ2 258 aa8.26□□□□□ -1.09
AP000439.1-201ENST00000544004 MND1Q9BWT6 205 aa8.26□□□□□ -1.09
AP000439.1-201ENST00000544004 C5orf66Q9H5L9 145 aa8.26□□□□□ -1.09
AP000439.1-201ENST00000544004 FKBP14Q9NWM8 211 aa8.26□□□□□ -1.09
AP000439.1-201ENST00000544004 ZNF257Q9Y2Q1 563 aa8.26□□□□□ -1.09
AP000439.1-201ENST00000544004 TSPAN4O14817 238 aa8.25□□□□□ -1.09
AP000439.1-201ENST00000544004 ACTL6BO94805 426 aa8.25□□□□□ -1.09
AP000439.1-201ENST00000544004 CD1AP06126 327 aa8.25□□□□□ -1.09
AP000439.1-201ENST00000544004 MAPK3P27361 379 aaPredicted RBP8.25□□□□□ -1.09
AP000439.1-201ENST00000544004 INSL4Q14641 139 aa8.25□□□□□ -1.09
AP000439.1-201ENST00000544004 RTL8BQ17RB0 113 aa8.25□□□□□ -1.09
AP000439.1-201ENST00000544004 ACSM3Q53FZ2 586 aa8.25□□□□□ -1.09
AP000439.1-201ENST00000544004 C10orf55Q5SWW7 151 aa8.25□□□□□ -1.09
AP000439.1-201ENST00000544004 SLC25A42Q86VD7 318 aa8.25□□□□□ -1.09
AP000439.1-201ENST00000544004 APRG1Q8IVJ8 170 aa8.25□□□□□ -1.09
AP000439.1-201ENST00000544004 CDH26Q8IXH8 852 aa8.25□□□□□ -1.09
AP000439.1-201ENST00000544004 POM121L12Q8N7R1 296 aa8.25□□□□□ -1.09
AP000439.1-201ENST00000544004 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.25□□□□□ -1.09
AP000439.1-201ENST00000544004 CD300LFQ8TDQ1 290 aa8.25□□□□□ -1.09
AP000439.1-201ENST00000544004 CCDC90BQ9GZT6 254 aa8.25□□□□□ -1.09
AP000439.1-201ENST00000544004 ZNF430Q9H8G1 570 aaPredicted RBP8.25□□□□□ -1.09
AP000439.1-201ENST00000544004 SDHAF2Q9NX18 166 aa8.25□□□□□ -1.09
AP000439.1-201ENST00000544004 RDH8Q9NYR8 311 aa8.25□□□□□ -1.09
AP000439.1-201ENST00000544004 TPRKBQ9Y3C4 175 aa8.25□□□□□ -1.09
AP000439.1-201ENST00000544004 LRP1BQ9NZR2 4599 aa8.25□□□□□ -1.09
AP000439.1-201ENST00000544004 HMX3A6NHT5 357 aa8.24□□□□□ -1.09
AP000439.1-201ENST00000544004 CDK2AP2O75956 126 aa8.24□□□□□ -1.09
AP000439.1-201ENST00000544004 HSMCR30P0CW71 290 aa8.24□□□□□ -1.09
AP000439.1-201ENST00000544004 TAGLNQ01995 201 aaKnown RBP8.24□□□□□ -1.09
AP000439.1-201ENST00000544004 SPHARQ15513 63 aa8.24□□□□□ -1.09
AP000439.1-201ENST00000544004 ZNF124Q15973 351 aa8.24□□□□□ -1.09
AP000439.1-201ENST00000544004 PVRIGQ6DKI7 326 aa8.24□□□□□ -1.09
AP000439.1-201ENST00000544004 OR10K2Q6IF99 312 aa8.24□□□□□ -1.09
AP000439.1-201ENST00000544004 CEACAM19Q7Z692 300 aa8.24□□□□□ -1.09
AP000439.1-201ENST00000544004 NR2C2APQ86WQ0 139 aa8.24□□□□□ -1.09
AP000439.1-201ENST00000544004 MS4A15Q8N5U1 240 aa8.24□□□□□ -1.09
AP000439.1-201ENST00000544004 OR4A5Q8NH83 315 aa8.24□□□□□ -1.09
AP000439.1-201ENST00000544004 EEF1AKMT3Q96AZ1 226 aa8.24□□□□□ -1.09
AP000439.1-201ENST00000544004 HDHD3Q9BSH5 251 aaPredicted RBP8.24□□□□□ -1.09
AP000439.1-201ENST00000544004 C6orf62Q9GZU0 229 aaPredicted RBP8.24□□□□□ -1.09
AP000439.1-201ENST00000544004 VCX3BQ9H321 246 aa8.24□□□□□ -1.09
AP000439.1-201ENST00000544004 TRBV6-6A0A0A6YYG2 114 aa8.23□□□□□ -1.09
AP000439.1-201ENST00000544004 IGHV3-35A0A0C4DH35 117 aa8.23□□□□□ -1.09
AP000439.1-201ENST00000544004 IGKV1-6A0A0C4DH72 117 aa8.23□□□□□ -1.09
AP000439.1-201ENST00000544004 OR4C46A6NHA9 309 aa8.23□□□□□ -1.09
AP000439.1-201ENST00000544004 CRYZL1O95825 349 aa8.23□□□□□ -1.09
AP000439.1-201ENST00000544004 CLEC3BP05452 202 aa8.23□□□□□ -1.09
AP000439.1-201ENST00000544004 P0DMU3 169 aa8.23□□□□□ -1.09
AP000439.1-201ENST00000544004 FAM231AP0DMU4 169 aa8.23□□□□□ -1.09
AP000439.1-201ENST00000544004 FAM231CP0DMU5 169 aa8.23□□□□□ -1.09
AP000439.1-201ENST00000544004 RRASP10301 218 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms