RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 PRSS8Q16651 343 aa17.01■□□□□ 0.31
OTUB1-212ENST00000543988 ACTBL2Q562R1 376 aa17.01■□□□□ 0.31
OTUB1-212ENST00000543988 VAX1Q5SQQ9 334 aa17.01■□□□□ 0.31
OTUB1-212ENST00000543988 VKORC1L1Q8N0U8 176 aa17.01■□□□□ 0.31
OTUB1-212ENST00000543988 TEX45Q8NA69 505 aa17.01■□□□□ 0.31
OTUB1-212ENST00000543988 MCFD2Q8NI22 146 aa17.01■□□□□ 0.31
OTUB1-212ENST00000543988 DIRAS2Q96HU8 199 aa17.01■□□□□ 0.31
OTUB1-212ENST00000543988 NXF2Q9GZY0 626 aaKnown RBP17.01■□□□□ 0.31
OTUB1-212ENST00000543988 PLXNB1O43157 2135 aa17■□□□□ 0.31
OTUB1-212ENST00000543988 A0A1W2PN81 502 aa17■□□□□ 0.31
OTUB1-212ENST00000543988 RAMP3O60896 148 aa17■□□□□ 0.31
OTUB1-212ENST00000543988 CNIH1O95406 144 aa17■□□□□ 0.31
OTUB1-212ENST00000543988 CHRNA7P36544 502 aa17■□□□□ 0.31
OTUB1-212ENST00000543988 TSPAN5P62079 268 aa17■□□□□ 0.31
OTUB1-212ENST00000543988 UNQ5815/PRO19632Q6UWF5 114 aa17■□□□□ 0.31
OTUB1-212ENST00000543988 SPAG16Q8N0X2 631 aa17■□□□□ 0.31
OTUB1-212ENST00000543988 LFNGQ8NES3 379 aa17■□□□□ 0.31
OTUB1-212ENST00000543988 OR51H1Q8NH63 302 aa17■□□□□ 0.31
OTUB1-212ENST00000543988 FCAMRQ8WWV6 532 aa17■□□□□ 0.31
OTUB1-212ENST00000543988 RSL24D1Q9UHA3 163 aaKnown RBP17■□□□□ 0.31
OTUB1-212ENST00000543988 GABARAPH6UMI1 98 aa16.99■□□□□ 0.31
OTUB1-212ENST00000543988 CD3DP04234 171 aa16.99■□□□□ 0.31
OTUB1-212ENST00000543988 TMEM267Q0VDI3 215 aaPredicted RBP16.99■□□□□ 0.31
OTUB1-212ENST00000543988 CATR1Q13166 79 aa16.99■□□□□ 0.31
OTUB1-212ENST00000543988 AADACL3Q5VUY0 350 aa16.99■□□□□ 0.31
OTUB1-212ENST00000543988 TCTEX1D1Q8N7M0 179 aa16.99■□□□□ 0.31
OTUB1-212ENST00000543988 CASTOR1Q8WTX7 329 aa16.99■□□□□ 0.31
OTUB1-212ENST00000543988 BORCS5Q969J3 196 aa16.99■□□□□ 0.31
OTUB1-212ENST00000543988 TINAGL1Q9GZM7 467 aaPredicted RBP16.99■□□□□ 0.31
OTUB1-212ENST00000543988 ZNF430Q9H8G1 570 aaPredicted RBP16.99■□□□□ 0.31
OTUB1-212ENST00000543988 NOTCH3Q9UM47 2321 aa16.99■□□□□ 0.31
OTUB1-212ENST00000543988 RBFOX2O43251 390 aaKnown RBP eCLIP16.98■□□□□ 0.311e-17■□□□□ 11
OTUB1-212ENST00000543988 RLN1P04808 185 aa16.98■□□□□ 0.31
OTUB1-212ENST00000543988 SLC6A1P30531 599 aa16.98■□□□□ 0.31
OTUB1-212ENST00000543988 CDX1P47902 265 aaPredicted RBP16.98■□□□□ 0.31
OTUB1-212ENST00000543988 MRPS10P82664 201 aaKnown RBP16.98■□□□□ 0.31
OTUB1-212ENST00000543988 IL18Q14116 193 aa16.98■□□□□ 0.31
OTUB1-212ENST00000543988 KIAA0141Q14154 515 aaPredicted RBP16.98■□□□□ 0.31
OTUB1-212ENST00000543988 DEFB136Q30KP8 78 aa16.98■□□□□ 0.31
OTUB1-212ENST00000543988 AKIRIN2Q53H80 203 aa16.98■□□□□ 0.31
OTUB1-212ENST00000543988 RNASE10Q5GAN6 216 aaKnown RBP16.98■□□□□ 0.31
OTUB1-212ENST00000543988 PYHIN1Q6K0P9 492 aa16.98■□□□□ 0.31
OTUB1-212ENST00000543988 TMEM65Q6PI78 240 aa16.98■□□□□ 0.31
OTUB1-212ENST00000543988 C1QL4Q86Z23 238 aa16.98■□□□□ 0.31
OTUB1-212ENST00000543988 SMIM4Q8WVI0 70 aa16.98■□□□□ 0.31
OTUB1-212ENST00000543988 ZNF701M0R085 212 aaPredicted RBP16.97■□□□□ 0.31
OTUB1-212ENST00000543988 TBPP20226 339 aa16.97■□□□□ 0.31
OTUB1-212ENST00000543988 TNFSF8P32971 234 aa16.97■□□□□ 0.31
OTUB1-212ENST00000543988 TNXAQ16473 311 aa16.97■□□□□ 0.31
OTUB1-212ENST00000543988 LINC00482Q8N8I6 264 aa16.97■□□□□ 0.31
OTUB1-212ENST00000543988 C4orf3Q8WVX3 66 aa16.97■□□□□ 0.31
OTUB1-212ENST00000543988 RAX2Q96IS3 184 aa16.97■□□□□ 0.31
OTUB1-212ENST00000543988 DUX3Q96PT4 197 aa16.97■□□□□ 0.31
OTUB1-212ENST00000543988 GNB4Q9HAV0 340 aa16.97■□□□□ 0.31
OTUB1-212ENST00000543988 G3V4G9 280 aa16.96■□□□□ 0.31
OTUB1-212ENST00000543988 GPR31O00270 319 aa16.96■□□□□ 0.31
OTUB1-212ENST00000543988 PGLYRP1O75594 196 aaPredicted RBP16.96■□□□□ 0.31
OTUB1-212ENST00000543988 RAB9AP51151 201 aa16.96■□□□□ 0.31
OTUB1-212ENST00000543988 PHLDA2Q53GA4 152 aa16.96■□□□□ 0.31
OTUB1-212ENST00000543988 C10orf55Q5SWW7 151 aa16.96■□□□□ 0.31
OTUB1-212ENST00000543988 ASPHD1Q5U4P2 390 aa16.96■□□□□ 0.31
OTUB1-212ENST00000543988 MRPL41Q8IXM3 137 aaKnown RBP16.96■□□□□ 0.31
OTUB1-212ENST00000543988 PUSL1Q8N0Z8 303 aaKnown RBP16.96■□□□□ 0.31
OTUB1-212ENST00000543988 TMEM229BQ8NBD8 167 aa16.96■□□□□ 0.31
OTUB1-212ENST00000543988 WFDC9Q8NEX5 89 aa16.96■□□□□ 0.31
OTUB1-212ENST00000543988 OR4D10Q8NGI6 311 aa16.96■□□□□ 0.31
OTUB1-212ENST00000543988 OR5M8Q8NGP6 311 aa16.96■□□□□ 0.31
OTUB1-212ENST00000543988 RHOVQ96L33 236 aa16.96■□□□□ 0.31
OTUB1-212ENST00000543988 CTDSPLO15194 276 aa16.95■□□□□ 0.3
OTUB1-212ENST00000543988 CREBL2O60519 120 aaPredicted RBP16.95■□□□□ 0.3
OTUB1-212ENST00000543988 KBTBD11O94819 623 aa16.95■□□□□ 0.3
OTUB1-212ENST00000543988 HRASP01112 189 aa16.95■□□□□ 0.3
OTUB1-212ENST00000543988 CD74P04233 296 aa16.95■□□□□ 0.3
OTUB1-212ENST00000543988 IFNA6P05013 189 aa16.95■□□□□ 0.3
OTUB1-212ENST00000543988 CD33P20138 364 aa16.95■□□□□ 0.3
OTUB1-212ENST00000543988 SAMD5Q5TGI4 173 aa16.95■□□□□ 0.3
OTUB1-212ENST00000543988 SSX9Q7RTT3 188 aa16.95■□□□□ 0.3
OTUB1-212ENST00000543988 CMTM1Q8IZ96 169 aa16.95■□□□□ 0.3
OTUB1-212ENST00000543988 ZNF491Q8N8L2 437 aa16.95■□□□□ 0.3
OTUB1-212ENST00000543988 SRSF12Q8WXF0 261 aaKnown RBP16.95■□□□□ 0.3
OTUB1-212ENST00000543988 UBE2E2Q96LR5 201 aa16.95■□□□□ 0.3
OTUB1-212ENST00000543988 P2RX4Q99571 388 aa16.95■□□□□ 0.3
OTUB1-212ENST00000543988 RABL2AQ9UBK7 228 aaPredicted RBP16.95■□□□□ 0.3
OTUB1-212ENST00000543988 RABL2BQ9UNT1 228 aa16.95■□□□□ 0.3
OTUB1-212ENST00000543988 CCL24O00175 119 aa16.94■□□□□ 0.3
OTUB1-212ENST00000543988 OR2A4O95047 310 aa16.94■□□□□ 0.3
OTUB1-212ENST00000543988 S1PR2O95136 353 aa16.94■□□□□ 0.3
OTUB1-212ENST00000543988 APELAP0DMC3 54 aa16.94■□□□□ 0.3
OTUB1-212ENST00000543988 MYCNOSP40205 109 aa16.94■□□□□ 0.3
OTUB1-212ENST00000543988 TAS2R19P59542 299 aa16.94■□□□□ 0.3
OTUB1-212ENST00000543988 SSBP1Q04837 148 aaKnown RBP16.94■□□□□ 0.3
OTUB1-212ENST00000543988 MMD2Q8IY49 270 aa16.94■□□□□ 0.3
OTUB1-212ENST00000543988 ARRDC1Q8N5I2 433 aa16.94■□□□□ 0.3
OTUB1-212ENST00000543988 POC5Q8NA72 575 aa16.94■□□□□ 0.3
OTUB1-212ENST00000543988 VSTM2AQ8TAG5 236 aa16.94■□□□□ 0.3
OTUB1-212ENST00000543988 TMEM167AQ8TBQ9 72 aa16.94■□□□□ 0.3
OTUB1-212ENST00000543988 CD300LFQ8TDQ1 290 aa16.94■□□□□ 0.3
OTUB1-212ENST00000543988 MS4A10Q96PG2 267 aa16.94■□□□□ 0.3
OTUB1-212ENST00000543988 OR5B12Q96R08 314 aa16.94■□□□□ 0.3
OTUB1-212ENST00000543988 OR2A7Q96R45 310 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms