RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 CX3CL1P78423 397 aa11.88□□□□□ -0.51
CD9-210ENST00000543916 SSBP2P81877 361 aaPredicted RBP11.88□□□□□ -0.51
CD9-210ENST00000543916 VMA21Q3ZAQ7 101 aa11.88□□□□□ -0.51
CD9-210ENST00000543916 CENPVQ7Z7K6 275 aaPredicted RBP11.88□□□□□ -0.51
CD9-210ENST00000543916 ZNF329Q86UD4 541 aa11.88□□□□□ -0.51
CD9-210ENST00000543916 TBC1D26Q86UD7 250 aa11.88□□□□□ -0.51
CD9-210ENST00000543916 PPP1R27Q86WC6 154 aa11.88□□□□□ -0.51
CD9-210ENST00000543916 VKORC1L1Q8N0U8 176 aa11.88□□□□□ -0.51
CD9-210ENST00000543916 OR5AU1Q8NGC0 362 aa11.88□□□□□ -0.51
CD9-210ENST00000543916 CHPT1Q8WUD6 406 aa11.88□□□□□ -0.51
CD9-210ENST00000543916 HRASLSQ9HDD0 168 aa11.88□□□□□ -0.51
CD9-210ENST00000543916 PARP11Q9NR21 331 aa11.88□□□□□ -0.51
CD9-210ENST00000543916 SLC2A9Q9NRM0 540 aa11.88□□□□□ -0.51
CD9-210ENST00000543916 SLC2A8Q9NY64 477 aa11.88□□□□□ -0.51
CD9-210ENST00000543916 PSMB11A5LHX3 300 aa11.87□□□□□ -0.51
CD9-210ENST00000543916 FBXO24O75426 580 aa11.87□□□□□ -0.51
CD9-210ENST00000543916 S1PR2O95136 353 aa11.87□□□□□ -0.51
CD9-210ENST00000543916 IGF1P05019 195 aa11.87□□□□□ -0.51
CD9-210ENST00000543916 F2RP25116 425 aa11.87□□□□□ -0.51
CD9-210ENST00000543916 AP3S2P59780 193 aa11.87□□□□□ -0.51
CD9-210ENST00000543916 RND3P61587 244 aa11.87□□□□□ -0.51
CD9-210ENST00000543916 ZNF45Q02386 682 aa11.87□□□□□ -0.51
CD9-210ENST00000543916 TCTEX1D4Q5JR98 221 aa11.87□□□□□ -0.51
CD9-210ENST00000543916 TEX45Q8NA69 505 aa11.87□□□□□ -0.51
CD9-210ENST00000543916 ZNF486Q96H40 463 aaPredicted RBP11.87□□□□□ -0.51
CD9-210ENST00000543916 PRRT1Q99946 306 aa11.87□□□□□ -0.51
CD9-210ENST00000543916 MCUBQ9NWR8 336 aa11.87□□□□□ -0.51
CD9-210ENST00000543916 TET2Q6N021 2002 aaPredicted RBP11.86□□□□□ -0.51
CD9-210ENST00000543916 ARPC1BO15143 372 aaKnown RBP11.86□□□□□ -0.51
CD9-210ENST00000543916 EGR2P11161 476 aaPredicted RBP11.86□□□□□ -0.51
CD9-210ENST00000543916 S100GP29377 79 aa11.86□□□□□ -0.51
CD9-210ENST00000543916 PIGPP57054 158 aa11.86□□□□□ -0.51
CD9-210ENST00000543916 CFHR3Q02985 330 aa11.86□□□□□ -0.51
CD9-210ENST00000543916 ZNF585BQ52M93 769 aa11.86□□□□□ -0.51
CD9-210ENST00000543916 ZNF57Q68EA5 555 aaPredicted RBP11.86□□□□□ -0.51
CD9-210ENST00000543916 ZNF562Q6V9R5 426 aa11.86□□□□□ -0.51
CD9-210ENST00000543916 LINC00299Q6ZSB3 139 aa11.86□□□□□ -0.51
CD9-210ENST00000543916 PUSL1Q8N0Z8 303 aaKnown RBP11.86□□□□□ -0.51
CD9-210ENST00000543916 POC5Q8NA72 575 aa11.86□□□□□ -0.51
CD9-210ENST00000543916 ZFAND1Q8TCF1 268 aa11.86□□□□□ -0.51
CD9-210ENST00000543916 RHOVQ96L33 236 aa11.86□□□□□ -0.51
CD9-210ENST00000543916 ZNF580Q9UK33 172 aa11.86□□□□□ -0.51
CD9-210ENST00000543916 G3V318 75 aa11.85□□□□□ -0.51
CD9-210ENST00000543916 MPPED1O15442 326 aa11.85□□□□□ -0.51
CD9-210ENST00000543916 HPRT1P00492 218 aa11.85□□□□□ -0.51
CD9-210ENST00000543916 HRASP01112 189 aa11.85□□□□□ -0.51
CD9-210ENST00000543916 CTSDP07339 412 aaPredicted RBP11.85□□□□□ -0.51
CD9-210ENST00000543916 IL7P13232 177 aa11.85□□□□□ -0.51
CD9-210ENST00000543916 FAUP35544 74 aaKnown RBP11.85□□□□□ -0.51
CD9-210ENST00000543916 ECI1P42126 302 aa11.85□□□□□ -0.51
CD9-210ENST00000543916 CRIP2P52943 208 aaPredicted RBP11.85□□□□□ -0.51
CD9-210ENST00000543916 GNB1P62873 340 aa11.85□□□□□ -0.51
CD9-210ENST00000543916 PRSS8Q16651 343 aa11.85□□□□□ -0.51
CD9-210ENST00000543916 C19orf54Q5BKX5 351 aa11.85□□□□□ -0.51
CD9-210ENST00000543916 TRIQKQ629K1 86 aa11.85□□□□□ -0.51
CD9-210ENST00000543916 SSX9Q7RTT3 188 aa11.85□□□□□ -0.51
CD9-210ENST00000543916 CD300LFQ8TDQ1 290 aa11.85□□□□□ -0.51
CD9-210ENST00000543916 RTBDNQ9BSG5 229 aaPredicted RBP11.85□□□□□ -0.51
CD9-210ENST00000543916 FAM103A1Q9BTL3 118 aaKnown RBP11.85□□□□□ -0.51
CD9-210ENST00000543916 ZNF430Q9H8G1 570 aaPredicted RBP11.85□□□□□ -0.51
CD9-210ENST00000543916 PLEKHA2Q9HB19 425 aa11.85□□□□□ -0.51
CD9-210ENST00000543916 SCP2D1Q9UJQ7 156 aa11.85□□□□□ -0.51
CD9-210ENST00000543916 WSB1Q9Y6I7 421 aa11.85□□□□□ -0.51
CD9-210ENST00000543916 TRAV41A0A0B4J266 112 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 KBTBD11O94819 623 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 OR2A4O95047 310 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 VDAC1P21796 283 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 LPAR6P43657 344 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 TAS2R31P59538 309 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 SLC35B1P78383 322 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 FXYD3Q14802 87 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 SURF2Q15527 256 aaPredicted RBP11.84□□□□□ -0.51
CD9-210ENST00000543916 POU2AF1Q16633 256 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 TCTEX1D1Q8N7M0 179 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 OR4X2Q8NGF9 303 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 GRPEL2Q8TAA5 225 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 ABHD5Q8WTS1 349 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 DEDD2Q8WXF8 326 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 ARPC1AQ92747 370 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 OR2A7Q96R45 310 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 TP53RKQ96S44 253 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 CITED2Q99967 270 aaPredicted RBP11.84□□□□□ -0.51
CD9-210ENST00000543916 C5orf66Q9H5L9 145 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 COMMD9Q9P000 198 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 GPR132Q9UNW8 380 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 VSIG4Q9Y279 399 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 PLXNB1O43157 2135 aa11.84□□□□□ -0.51
CD9-210ENST00000543916 ADARB2-AS1A8MUL3 147 aa11.83□□□□□ -0.52
CD9-210ENST00000543916 IGKV1-39P01597 117 aa11.83□□□□□ -0.52
CD9-210ENST00000543916 IGKV1D-39P04432 117 aa11.83□□□□□ -0.52
CD9-210ENST00000543916 RPA2P15927 270 aa11.83□□□□□ -0.52
CD9-210ENST00000543916 NQO2P16083 231 aa11.83□□□□□ -0.52
CD9-210ENST00000543916 PPIFP30405 207 aaKnown RBP11.83□□□□□ -0.52
CD9-210ENST00000543916 INPP1P49441 399 aa11.83□□□□□ -0.52
CD9-210ENST00000543916 CD83Q01151 205 aa11.83□□□□□ -0.52
CD9-210ENST00000543916 TNXAQ16473 311 aa11.83□□□□□ -0.52
CD9-210ENST00000543916 ECSCRQ19T08 205 aa11.83□□□□□ -0.52
CD9-210ENST00000543916 OR4A47Q6IF82 309 aa11.83□□□□□ -0.52
CD9-210ENST00000543916 CCDC71LQ8N9Z2 235 aa11.83□□□□□ -0.52
CD9-210ENST00000543916 SGMS2Q8NHU3 365 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms