RNA–Protein interactions for RNA: ENST00000542765.4

LDHB-209, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-209ENST00000542765 YIPF3Q9GZM5 350 aa1.85□□□□□ -2.11
LDHB-209ENST00000542765 SYT4Q9H2B2 425 aa1.85□□□□□ -2.11
LDHB-209ENST00000542765 ARV1Q9H2C2 271 aa1.85□□□□□ -2.11
LDHB-209ENST00000542765 NMNAT1Q9HAN9 279 aaPredicted RBP1.85□□□□□ -2.11
LDHB-209ENST00000542765 SDHAF2Q9NX18 166 aa1.85□□□□□ -2.11
LDHB-209ENST00000542765 MS4A12Q9NXJ0 267 aa1.85□□□□□ -2.11
LDHB-209ENST00000542765 TAS2R5Q9NYW4 299 aa1.85□□□□□ -2.11
LDHB-209ENST00000542765 ANGPT4Q9Y264 503 aa1.85□□□□□ -2.11
LDHB-209ENST00000542765 SIGLEC7Q9Y286 467 aa1.85□□□□□ -2.11
LDHB-209ENST00000542765 POFUT2Q9Y2G5 429 aa1.85□□□□□ -2.11
LDHB-209ENST00000542765 SAMHD1Q9Y3Z3 626 aaKnown RBP1.85□□□□□ -2.11
LDHB-209ENST00000542765 HSPE1-MOB4S4R3N1 261 aa1.85□□□□□ -2.11
LDHB-209ENST00000542765 U3KQA8 63 aa1.85□□□□□ -2.11
LDHB-209ENST00000542765 FREM3P0C091 2139 aa1.85□□□□□ -2.11
LDHB-209ENST00000542765 DOCK10Q96BY6 2186 aa1.85□□□□□ -2.11
LDHB-209ENST00000542765 SDK2Q58EX2 2172 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 IGKV3D-11A0A0A0MRZ8 115 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 IGHV2OR16-5A0A0B4J2B6 119 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 FAM240AA0A1B0GVK7 77 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 ANKRD20A5PA0PJZ0 165 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 ISPDA4D126 451 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 TLCD2A6NGC4 264 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 CPSF4LA6NMK7 179 aaKnown RBP1.84□□□□□ -2.11
LDHB-209ENST00000542765 C5orf58C9J3I9 102 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 M0R129 80 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 FAAHO00519 579 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 CDC42EP2O14613 210 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 PSPHP1O15172 72 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 ENSAO43768 121 aaKnown RBP1.84□□□□□ -2.11
LDHB-209ENST00000542765 MRPS14O60783 128 aaKnown RBP1.84□□□□□ -2.11
LDHB-209ENST00000542765 E2F6O75461 281 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 KCNK2O95069 426 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 IFNA14P01570 189 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 CDK1P06493 297 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 PRSS3P35030 304 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 TGFBR2P37173 567 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 MAP2K4P45985 399 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 GPR4P46093 362 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 OMPP47874 163 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 RGS6P49758 472 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 GDI2P50395 445 aaKnown RBP1.84□□□□□ -2.11
LDHB-209ENST00000542765 RBX1P62877 108 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 IL5RAQ01344 420 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 NEDD8Q15843 81 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 DEFB133Q30KQ1 61 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 NDUFAF6Q330K2 333 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 MRPL2Q5T653 305 aaKnown RBP1.84□□□□□ -2.11
LDHB-209ENST00000542765 KPRPQ5T749 579 aaPredicted RBP1.84□□□□□ -2.11
LDHB-209ENST00000542765 FAM27D1Q5T7N8 215 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 SYT6Q5T7P8 510 aaPredicted RBP1.84□□□□□ -2.11
LDHB-209ENST00000542765 CLVS1Q8IUQ0 354 aaPredicted RBP1.84□□□□□ -2.11
LDHB-209ENST00000542765 DEFB123Q8N688 67 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 SLC35G3Q8N808 338 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 CDRT4Q8N9R6 151 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 SPANXA2-OT1Q8N9U9 137 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 CYB561A3Q8NBI2 242 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 BPIFB6Q8NFQ5 453 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 OR52R1Q8NGF1 315 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 OR51Q1Q8NH59 317 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 ZNF420Q8TAQ5 688 aaPredicted RBP1.84□□□□□ -2.11
LDHB-209ENST00000542765 LZICQ8WZA0 190 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 ISOC1Q96CN7 298 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 TRNT1Q96Q11 434 aaKnown RBP1.84□□□□□ -2.11
LDHB-209ENST00000542765 ZNF649Q9BS31 505 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 ZNF426Q9BUY5 554 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 HINT2Q9BX68 163 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 MAP1LC3CQ9BXW4 147 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 TBL1XR1Q9BZK7 514 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 PLA2G12AQ9BZM1 189 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 DSN1Q9H410 356 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 CXorf21Q9HAI6 301 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 ACOT13Q9NPJ3 140 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 PRTFDC1Q9NRG1 225 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 IL20Q9NYY1 176 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 CALML5Q9NZT1 146 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 RSL24D1Q9UHA3 163 aaKnown RBP1.84□□□□□ -2.11
LDHB-209ENST00000542765 ENPP5Q9UJA9 477 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 SLC7A11Q9UPY5 501 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 ZNF443Q9Y2A4 671 aaPredicted RBP1.84□□□□□ -2.11
LDHB-209ENST00000542765 ZNF780BQ9Y6R6 833 aa1.84□□□□□ -2.11
LDHB-209ENST00000542765 ASCC3Q8N3C0 2202 aaKnown RBP1.84□□□□□ -2.11
LDHB-209ENST00000542765 KNL1Q8NG31 2342 aa1.84□□□□□ -2.12
LDHB-209ENST00000542765 BDP1A6H8Y1 2624 aa1.84□□□□□ -2.12
LDHB-209ENST00000542765 TNRC6AQ8NDV7 1962 aaKnown RBP1.83□□□□□ -2.12
LDHB-209ENST00000542765 TRAV8-6A0A0B4J262 113 aa1.83□□□□□ -2.12
LDHB-209ENST00000542765 A0A1B0GX12 115 aa1.83□□□□□ -2.12
LDHB-209ENST00000542765 ZNF98A6NK75 572 aa1.83□□□□□ -2.12
LDHB-209ENST00000542765 LINC01619G3V211 115 aa1.83□□□□□ -2.12
LDHB-209ENST00000542765 J3QRE1 110 aa1.83□□□□□ -2.12
LDHB-209ENST00000542765 ZNF593O00488 134 aaPredicted RBP1.83□□□□□ -2.12
LDHB-209ENST00000542765 BHLHE40O14503 412 aa1.83□□□□□ -2.12
LDHB-209ENST00000542765 GMDSO60547 372 aa1.83□□□□□ -2.12
LDHB-209ENST00000542765 ENTPD6O75354 484 aa1.83□□□□□ -2.12
LDHB-209ENST00000542765 OR5F1O95221 314 aa1.83□□□□□ -2.12
LDHB-209ENST00000542765 SOX14O95416 240 aa1.83□□□□□ -2.12
LDHB-209ENST00000542765 FADS2O95864 444 aaKnown RBP1.83□□□□□ -2.12
LDHB-209ENST00000542765 DBIP07108 87 aaKnown RBP1.83□□□□□ -2.12
LDHB-209ENST00000542765 TSPAN19P0C672 248 aa1.83□□□□□ -2.12
LDHB-209ENST00000542765 PIPP12273 146 aaPredicted RBP1.83□□□□□ -2.12
LDHB-209ENST00000542765 GABRA3P34903 492 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms