RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 GGACTQ9BVM4 153 aa5.43□□□□□ -1.54
PTPRO-208ENST00000542557 CTDSP1Q9GZU7 261 aa5.43□□□□□ -1.54
PTPRO-208ENST00000542557 SDF2L1Q9HCN8 221 aa5.43□□□□□ -1.54
PTPRO-208ENST00000542557 CALYQ9NYX4 217 aa5.43□□□□□ -1.54
PTPRO-208ENST00000542557 LOC400499M0QZD8 3231 aa5.43□□□□□ -1.54
PTPRO-208ENST00000542557 SPENQ96T58 3664 aaKnown RBP5.43□□□□□ -1.54
PTPRO-208ENST00000542557 TTC28Q96AY4 2481 aa5.43□□□□□ -1.54
PTPRO-208ENST00000542557 ZNF727A8MUV8 499 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 FCGR3BO75015 233 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 MPDU1O75352 247 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 RBMXL2O75526 392 aaKnown RBP5.42□□□□□ -1.54
PTPRO-208ENST00000542557 CD55P08174 381 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 OR9G9P0C7N8 305 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 OR2B8PP59922 312 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 ERVK-16P61578 105 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 RPP30P78346 268 aaKnown RBP5.42□□□□□ -1.54
PTPRO-208ENST00000542557 FABP9Q0Z7S8 132 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 TMEM249Q2WGJ8 235 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 TMEM30BQ3MIR4 351 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 PRAMEF5Q5TYX0 476 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 WDR25Q64LD2 544 aaPredicted RBP5.42□□□□□ -1.54
PTPRO-208ENST00000542557 CYP2G1PQ6ZSU1 146 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 OR10G9Q8NGN4 311 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 OR10G7Q8NGN6 311 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 ITLN1Q8WWA0 313 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 DDB2Q92466 427 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 QTRT1Q9BXR0 403 aaKnown RBP5.42□□□□□ -1.54
PTPRO-208ENST00000542557 ACTR3CQ9C0K3 210 aaPredicted RBP5.42□□□□□ -1.54
PTPRO-208ENST00000542557 WDR83OSQ9Y284 106 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 URB1O60287 2271 aaKnown RBP5.42□□□□□ -1.54
PTPRO-208ENST00000542557 IGHV3OR15-7A0A075B7D8 119 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 TRGV8A0A0C4DH27 118 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 M0R1X1 148 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 NQO2P16083 231 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 PSMB3P49720 205 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 CD81P60033 236 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 ERVFRD-1P60508 538 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 TFF3Q07654 80 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 FFAR4Q5NUL3 377 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 Q8N7P7 452 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 RBMXL3Q8N7X1 1067 aaKnown RBP5.42□□□□□ -1.54
PTPRO-208ENST00000542557 ZNF709Q8N972 641 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 Q8TCH9 128 aa5.42□□□□□ -1.54
PTPRO-208ENST00000542557 PRRC2CQ9Y520 2896 aaKnown RBP5.41□□□□□ -1.54
PTPRO-208ENST00000542557 SEC14L6B5MCN3 397 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 CLDN34H7C241 214 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 KBTBD11O94819 623 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 CXCL1P09341 107 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 VDAC2P45880 294 aaPredicted RBP5.41□□□□□ -1.54
PTPRO-208ENST00000542557 RPS10P46783 165 aaKnown RBP5.41□□□□□ -1.54
PTPRO-208ENST00000542557 TMPRSS3P57727 454 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 LINC00205P59089 165 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 SELENOVP59797 346 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 LTC4SQ16873 150 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 C17orf58Q2M2W7 97 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 STUMQ69YW2 141 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 ZNF343Q6P1L6 599 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 C1orf87Q8N0U7 546 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 RPRMLQ8N4K4 120 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 NUP37Q8NFH4 326 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 OR4A16Q8NH70 328 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 OR4S2Q8NH73 311 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 FAM57AQ8TBR7 257 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 RAB1CQ92928 201 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 S1PR3Q99500 378 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 FAM234AQ9H0X4 552 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 LINC00574Q9H8X3 128 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 SLC25A22Q9H936 323 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 GFOD1Q9NXC2 390 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 RNF7Q9UBF6 113 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 NAT8Q9UHE5 227 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 PRR14LQ5THK1 2151 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 TRBV24-1A0A075B6N3 115 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 KBTBD11-OT1A0A1B0GTJ5 212 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 CYB5BO43169 146 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 SPRY3O43610 288 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 THBS3P49746 956 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 ZNF134P52741 427 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 EDDM3BP56851 147 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 RELBQ01201 579 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 ACOT6Q3I5F7 207 aaPredicted RBP5.41□□□□□ -1.54
PTPRO-208ENST00000542557 SPRNQ5BIV9 151 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 ZNRF1Q8ND25 227 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 ADTRPQ96IZ2 230 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 ZFHX4Q86UP3 3567 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 HEATR1Q9H583 2144 aaKnown RBP5.41□□□□□ -1.54
PTPRO-208ENST00000542557 TRGV10A0A0A0MS01 117 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 SMCO3A2RU48 225 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 PRSS46E5RG02 174 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 TM4SF5O14894 197 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 IGHV1-46P01743 117 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 CD1BP29016 333 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 CDC34P49427 236 aaPredicted RBP5.41□□□□□ -1.54
PTPRO-208ENST00000542557 KIAA0141Q14154 515 aaPredicted RBP5.41□□□□□ -1.54
PTPRO-208ENST00000542557 POU2AF1Q16633 256 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 RPL39P5Q59GN2 51 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 RAB24Q969Q5 203 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 SMIM7Q9BQ49 75 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 GCM1Q9NP62 436 aa5.41□□□□□ -1.54
PTPRO-208ENST00000542557 TMEM140Q9NV12 185 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms