RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 SRSF2Q01130 221 aaKnown RBP4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 TFF3Q07654 80 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 ZNF816Q0VGE8 651 aaPredicted RBP4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 BSXQ3C1V8 233 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 FFAR4Q5NUL3 377 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 ATP1A1-AS1Q5TC04 95 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 MBNL2Q5VZF2 373 aaKnown RBP4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 UNQ6494/PRO21346Q6UXR6 183 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 H2BFWTQ7Z2G1 175 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 C16orf82Q7Z2V1 217 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 ZNF808Q8N4W9 903 aaPredicted RBP4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 ZNF383Q8NA42 475 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 OR10P1Q8NGE3 313 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 OR10A7Q8NGE5 316 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 OR51G1Q8NGK1 321 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 OR10G9Q8NGN4 311 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 OR10G7Q8NGN6 311 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 OR10D4PQ8NGN7 298 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 OR13A1Q8NGR1 328 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 OR4X1Q8NH49 305 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 MRGPRDQ8TDS7 321 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 RAB24Q969Q5 203 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 PARLQ9H300 379 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 SLC25A22Q9H936 323 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 OBP2BQ9NPH6 170 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 PITPNC1Q9UKF7 332 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 WDR83OSQ9Y284 106 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 CHD3Q12873 2000 aaKnown RBP4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 CHD8Q9HCK8 2581 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 IGHV3-64DA0A0J9YX35 117 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 PRSS46E5RG02 174 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 GGCTO75223 188 aaKnown RBP4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 TYMSP04818 313 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 PAX1P15863 534 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 GZMHP20718 246 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 NPPCP23582 126 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 CD40P25942 277 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 DUTP33316 252 aaKnown RBP4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 SSTR5P35346 364 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 GABRA2P47869 451 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 PDLIM4P50479 330 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 TMPRSS3P57727 454 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 PMP22Q01453 160 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 COL10A1Q03692 680 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 FOXF2Q12947 444 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 ADIRFQ15847 76 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 SMIM21Q3B7S5 101 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 HES3Q5TGS1 186 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 PRAMEF6Q5VXH4 476 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 IGFL2Q6UWQ7 119 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 DHRS13Q6UX07 377 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 FAM90A1Q86YD7 464 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 TMEM183AQ8IXX5 376 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 C1orf174Q8IYL3 243 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 CD177Q8N6Q3 437 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 OR52E5Q8NH55 327 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 RNASEH2CQ8TDP1 164 aaKnown RBP4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 GATAD1Q8WUU5 269 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 WFDC12Q8WWY7 111 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 RAB1CQ92928 201 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 NEIL1Q96FI4 390 aaPredicted RBP4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 DOCK7Q96N67 2140 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 HIST1H2BLQ99880 126 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 OR6C3Q9NZP0 311 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 U3KQE9 123 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 CFAP47Q6ZTR5 3102 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 USP24Q9UPU5 2620 aa4.31□□□□□ -1.72
ATPAF1-212ENST00000542495 AHCTF1Q8WYP5 2266 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 MARCH11A6NNE9 402 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 C17orf112F2Z3M2 114 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 H7BYZ3 331 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 RBFOX2O43251 390 aaKnown RBP eCLIP4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 YPEL1O60688 119 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 PAGE4O60829 102 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 AGFG2O95081 481 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 HRASP01112 189 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 GYPAP02724 150 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 TFF1P04155 84 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 OR9G9P0C7N8 305 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 CECR9P0C854 216 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 C1QTNF9P0C862 333 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 CD99P14209 185 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 ADMP35318 185 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 CFHR2P36980 270 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 SRP14P37108 136 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 VDAC2P45880 294 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 GALR1P47211 349 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 HOXA4Q00056 320 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 TRIP6Q15654 476 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 ACOT6Q3I5F7 207 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 Q3ZCU0 254 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 BTNL3Q6UXE8 466 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 TMPRSS7Q7RTY8 843 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 CXorf67Q86X51 503 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 GCNT2Q8N0V5 402 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 ZNF709Q8N972 641 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 C9orf106Q8NAJ2 232 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 OR4F5Q8NH21 305 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 OR5R1Q8NH85 324 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 PPP1R35Q8TAP8 253 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms