RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 MPV17P39210 176 aa12.83□□□□□ -0.36
CNOT9-208ENST00000542068 CNN1P51911 297 aaKnown RBP12.83□□□□□ -0.36
CNOT9-208ENST00000542068 ZNF124Q15973 351 aa12.83□□□□□ -0.36
CNOT9-208ENST00000542068 DEFB109BQ30KR1 87 aa12.83□□□□□ -0.36
CNOT9-208ENST00000542068 VWA1Q6PCB0 445 aa12.83□□□□□ -0.36
CNOT9-208ENST00000542068 TMEM170AQ8WVE7 144 aa12.83□□□□□ -0.36
CNOT9-208ENST00000542068 SSMEM1Q8WWF3 244 aa12.83□□□□□ -0.36
CNOT9-208ENST00000542068 GALMQ96C23 342 aa12.83□□□□□ -0.36
CNOT9-208ENST00000542068 NDUFAF3Q9BU61 184 aa12.83□□□□□ -0.36
CNOT9-208ENST00000542068 LINC00470Q9BZP3 86 aa12.83□□□□□ -0.36
CNOT9-208ENST00000542068 FKBP11Q9NYL4 201 aa12.83□□□□□ -0.36
CNOT9-208ENST00000542068 OR6C3Q9NZP0 311 aa12.83□□□□□ -0.36
CNOT9-208ENST00000542068 ADGRG4Q8IZF6 3080 aa12.83□□□□□ -0.36
CNOT9-208ENST00000542068 SRSF7Q16629 238 aaKnown RBP eCLIP12.82□□□□□ -0.36
CNOT9-208ENST00000542068 KCNIP4Q6PIL6 250 aa12.82□□□□□ -0.36
CNOT9-208ENST00000542068 SH3BGRL2Q9UJC5 107 aa12.82□□□□□ -0.36
CNOT9-208ENST00000542068 ZNF318Q5VUA4 2279 aa12.82□□□□□ -0.36
CNOT9-208ENST00000542068 ZGRF1Q86YA3 2104 aa12.82□□□□□ -0.36
CNOT9-208ENST00000542068 HBZP02008 142 aa12.82□□□□□ -0.36
CNOT9-208ENST00000542068 GNB1P62873 340 aa12.82□□□□□ -0.36
CNOT9-208ENST00000542068 PEAR1Q5VY43 1037 aaPredicted RBP12.82□□□□□ -0.36
CNOT9-208ENST00000542068 MUC6Q6W4X9 2439 aa12.82□□□□□ -0.36
CNOT9-208ENST00000542068 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.82□□□□□ -0.36
CNOT9-208ENST00000542068 HAND1O96004 215 aa12.82□□□□□ -0.36
CNOT9-208ENST00000542068 PSG7Q13046 419 aa12.82□□□□□ -0.36
CNOT9-208ENST00000542068 HINT2Q9BX68 163 aa12.82□□□□□ -0.36
CNOT9-208ENST00000542068 QTRT1Q9BXR0 403 aaKnown RBP12.82□□□□□ -0.36
CNOT9-208ENST00000542068 IGHV1-2P23083 117 aa12.81□□□□□ -0.36
CNOT9-208ENST00000542068 BCL2L2Q92843 193 aaPredicted RBP12.81□□□□□ -0.36
CNOT9-208ENST00000542068 MS4A10Q96PG2 267 aa12.81□□□□□ -0.36
CNOT9-208ENST00000542068 METRNQ9UJH8 293 aa12.81□□□□□ -0.36
CNOT9-208ENST00000542068 COL6A6A6NMZ7 2263 aa12.81□□□□□ -0.36
CNOT9-208ENST00000542068 SLC17A3O00476 420 aa12.81□□□□□ -0.36
CNOT9-208ENST00000542068 ANKRD11Q6UB99 2663 aaPredicted RBP12.81□□□□□ -0.36
CNOT9-208ENST00000542068 SPTBN1Q01082 2364 aaKnown RBP12.81□□□□□ -0.36
CNOT9-208ENST00000542068 A6NNC1 897 aa12.8□□□□□ -0.36
CNOT9-208ENST00000542068 TMEM250H0YL14 139 aa12.8□□□□□ -0.36
CNOT9-208ENST00000542068 FOSL1P15407 271 aa12.8□□□□□ -0.36
CNOT9-208ENST00000542068 CBLN1P23435 193 aa12.8□□□□□ -0.36
CNOT9-208ENST00000542068 SNHG12Q9BXW3 62 aa12.8□□□□□ -0.36
CNOT9-208ENST00000542068 POLDIP2Q9Y2S7 368 aa12.8□□□□□ -0.36
CNOT9-208ENST00000542068 LINC00473A8K010 186 aa12.8□□□□□ -0.36
CNOT9-208ENST00000542068 FCGR3BO75015 233 aa12.8□□□□□ -0.36
CNOT9-208ENST00000542068 ACTL10Q5JWF8 245 aa12.8□□□□□ -0.36
CNOT9-208ENST00000542068 TOMM20LQ6UXN7 152 aa12.8□□□□□ -0.36
CNOT9-208ENST00000542068 DEFB108BQ8NET1 73 aa12.8□□□□□ -0.36
CNOT9-208ENST00000542068 TBX15Q96SF7 602 aa12.8□□□□□ -0.36
CNOT9-208ENST00000542068 HSPB7Q9UBY9 170 aa12.8□□□□□ -0.36
CNOT9-208ENST00000542068 MRPS18CQ9Y3D5 142 aaKnown RBP12.8□□□□□ -0.36
CNOT9-208ENST00000542068 RNF212BA8MTL3 300 aa12.8□□□□□ -0.36
CNOT9-208ENST00000542068 FOXF2Q12947 444 aa12.8□□□□□ -0.36
CNOT9-208ENST00000542068 IQCJQ1A5X6 159 aa12.8□□□□□ -0.36
CNOT9-208ENST00000542068 TDRG1Q3Y452 100 aa12.8□□□□□ -0.36
CNOT9-208ENST00000542068 MIC13Q5XKP0 118 aa12.8□□□□□ -0.36
CNOT9-208ENST00000542068 KLF14Q8TD94 323 aaPredicted RBP12.8□□□□□ -0.36
CNOT9-208ENST00000542068 FAM103A1Q9BTL3 118 aaKnown RBP12.8□□□□□ -0.36
CNOT9-208ENST00000542068 ZDHHC11Q9H8X9 412 aa12.8□□□□□ -0.36
CNOT9-208ENST00000542068 HEYLQ9NQ87 328 aaPredicted RBP12.8□□□□□ -0.36
CNOT9-208ENST00000542068 MANBALQ9NQG1 85 aa12.8□□□□□ -0.36
CNOT9-208ENST00000542068 PCSK5Q92824 1860 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 RBFOX2O43251 390 aaKnown RBP eCLIP12.79□□□□□ -0.362e-12■■■□□ 14.8
CNOT9-208ENST00000542068 SMPD2O60906 423 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 SLC35B1P78383 322 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 CATR1Q13166 79 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 LINC01551Q86U37 167 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 ZNF645Q8N7E2 425 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 OR2Z1Q8NG97 314 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 NOL4LQ96MY1 436 aaPredicted RBP12.79□□□□□ -0.36
CNOT9-208ENST00000542068 C2orf88Q9BSF0 95 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 TNCP24821 2201 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 MKRN2OSH3BPM6 223 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 AQP7O14520 342 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 GCGP01275 180 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 FRMD6-AS1P0C7T7 363 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 CD82P27701 267 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 PDLIM3Q53GG5 364 aaPredicted RBP12.79□□□□□ -0.36
CNOT9-208ENST00000542068 ANAPC16Q96DE5 110 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 PYGO2Q9BRQ0 406 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 TLN1Q9Y490 2541 aaKnown RBP12.79□□□□□ -0.36
CNOT9-208ENST00000542068 IGHV3OR15-7A0A075B7D8 119 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 MDFIC2A0A1B0GVS7 189 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 SCO2A0A1W2PP80 73 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 F6UZH7 168 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 ARL14EPLP0DKL9 152 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 ZNF25P17030 456 aaPredicted RBP12.79□□□□□ -0.36
CNOT9-208ENST00000542068 KITLGP21583 273 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 BRWD1-AS2P59051 145 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 ACOT6Q3I5F7 207 aaPredicted RBP12.79□□□□□ -0.36
CNOT9-208ENST00000542068 Q6ZR03 302 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 TGIF2LYQ8IUE0 185 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 ABHD12Q8N2K0 398 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 ACY3Q96HD9 319 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 AGMATQ9BSE5 352 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 OPN3Q9H1Y3 402 aaPredicted RBP12.79□□□□□ -0.36
CNOT9-208ENST00000542068 GNG12Q9UBI6 72 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 PAM16Q9Y3D7 125 aa12.79□□□□□ -0.36
CNOT9-208ENST00000542068 TRBV6-6A0A0A6YYG2 114 aa12.78□□□□□ -0.36
CNOT9-208ENST00000542068 TMEM30CPA0ZSE6 113 aa12.78□□□□□ -0.36
CNOT9-208ENST00000542068 ACTL6BO94805 426 aa12.78□□□□□ -0.36
CNOT9-208ENST00000542068 ZNF83P51522 516 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms