RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 TMEM50BP56557 158 aa4.48□□□□□ -1.69
SUDS3-202ENST00000541280 HLA-DRB3P79483 266 aa4.48□□□□□ -1.69
SUDS3-202ENST00000541280 TMEM267Q0VDI3 215 aaPredicted RBP4.48□□□□□ -1.69
SUDS3-202ENST00000541280 DIAPH2-AS1Q14236 149 aa4.48□□□□□ -1.69
SUDS3-202ENST00000541280 NSUN5P1Q3KNT7 163 aa4.48□□□□□ -1.69
SUDS3-202ENST00000541280 PDLIM3Q53GG5 364 aaPredicted RBP4.48□□□□□ -1.69
SUDS3-202ENST00000541280 CXorf66Q5JRM2 361 aaPredicted RBP4.48□□□□□ -1.69
SUDS3-202ENST00000541280 ZNF660Q6AZW8 331 aaPredicted RBP4.48□□□□□ -1.69
SUDS3-202ENST00000541280 Q6ZS49 121 aa4.48□□□□□ -1.69
SUDS3-202ENST00000541280 STPG2Q8N412 459 aa4.48□□□□□ -1.69
SUDS3-202ENST00000541280 Q8N9W7 124 aa4.48□□□□□ -1.69
SUDS3-202ENST00000541280 NPBQ8NG41 125 aa4.48□□□□□ -1.69
SUDS3-202ENST00000541280 OR10J5Q8NHC4 309 aa4.48□□□□□ -1.69
SUDS3-202ENST00000541280 SETD6Q8TBK2 473 aa4.48□□□□□ -1.69
SUDS3-202ENST00000541280 ARHGAP5-AS1Q96IT6 56 aa4.48□□□□□ -1.69
SUDS3-202ENST00000541280 NABP2Q9BQ15 211 aa4.48□□□□□ -1.69
SUDS3-202ENST00000541280 PECRQ9BY49 303 aa4.48□□□□□ -1.69
SUDS3-202ENST00000541280 DCSTAMPQ9H295 470 aa4.48□□□□□ -1.69
SUDS3-202ENST00000541280 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.48□□□□□ -1.69
SUDS3-202ENST00000541280 PLSCR3Q9NRY6 295 aa4.48□□□□□ -1.69
SUDS3-202ENST00000541280 RNF150Q9ULK6 438 aa4.48□□□□□ -1.69
SUDS3-202ENST00000541280 ARHGAP32A7KAX9 2087 aa4.48□□□□□ -1.69
SUDS3-202ENST00000541280 WNK2Q9Y3S1 2297 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 A0A087WXM4 84 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 A0A0A6YYD4 124 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 IGHV3-72A0A0B4J1Y9 119 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 ARPC1BO15143 372 aaKnown RBP4.47□□□□□ -1.69
SUDS3-202ENST00000541280 SLC31A2O15432 143 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 NBR2O15453 112 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 FABP7O15540 132 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 IGLV2-11P01706 119 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 RRASP10301 218 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 HIST1H1DP16402 221 aaKnown RBP4.47□□□□□ -1.69
SUDS3-202ENST00000541280 DTYMKP23919 212 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 PPP1CCP36873 323 aaKnown RBP4.47□□□□□ -1.69
SUDS3-202ENST00000541280 MYCNOSP40205 109 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 CDX1P47902 265 aaPredicted RBP4.47□□□□□ -1.69
SUDS3-202ENST00000541280 LGALS7P47929 136 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 REG1BP48304 166 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 ACTBP60709 375 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 RPL23AP62750 156 aaKnown RBP4.47□□□□□ -1.69
SUDS3-202ENST00000541280 CBX3Q13185 183 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 DCTN2Q13561 401 aaKnown RBP4.47□□□□□ -1.69
SUDS3-202ENST00000541280 ARFRP1Q13795 201 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 MMDQ15546 238 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 UTF1Q5T230 341 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 KPRPQ5T749 579 aaPredicted RBP4.47□□□□□ -1.69
SUDS3-202ENST00000541280 HES5Q5TA89 166 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 C22orf42Q6IC83 251 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 ODF3L1Q8IXM7 274 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 FAM71E2Q8N5Q1 922 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 TCTEX1D1Q8N7M0 179 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 UBALD1Q8TB05 177 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 ADTRPQ96IZ2 230 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 TMEM68Q96MH6 324 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 TSNAXQ99598 290 aaKnown RBP4.47□□□□□ -1.69
SUDS3-202ENST00000541280 GFI1Q99684 422 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 AGMATQ9BSE5 352 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 NICN1Q9BSH3 213 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 ATG5Q9H1Y0 275 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 IFI27L2Q9H2X8 130 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 DIABLOQ9NR28 239 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 TXNL4BQ9NX01 149 aaKnown RBP4.47□□□□□ -1.69
SUDS3-202ENST00000541280 ZNF107Q9UII5 783 aaPredicted RBP4.47□□□□□ -1.69
SUDS3-202ENST00000541280 WASHC3Q9Y3C0 194 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 ETV7Q9Y603 341 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 MXRA5Q9NR99 2828 aa4.47□□□□□ -1.69
SUDS3-202ENST00000541280 SAA2-SAA4A0A096LPE2 208 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 TRBV6-7A0A0A0MS04 114 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 MFNGO00587 321 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 GAGE7O76087 117 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 NDUFA3O95167 84 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 TNFAIP8O95379 198 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 IGHG4P01861 327 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 HLA-DRB1P01911 266 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 APOA2P02652 100 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 TFAP2AP05549 437 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 FCGR3AP08637 254 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 SCTP09683 121 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 GAGE12FP0CL80 117 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 GAGE12GP0CL81 117 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 GAGE12IP0CL82 117 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 SAA2P0DJI9 122 aaPredicted RBP4.46□□□□□ -1.7
SUDS3-202ENST00000541280 CT45A6P0DMU7 189 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 CT45A5P0DMU8 189 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 CT45A7P0DMV0 189 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 IGHV4-30-4P0DP06 118 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 F2RL1P55085 397 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 CLDN12P56749 244 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 GAGE1Q13065 139 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 GAGE4Q13068 117 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 C5orf64Q2M2E5 130 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 CDNFQ49AH0 187 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 TCTEX1D4Q5JR98 221 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 HACD4Q5VWC8 232 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 PYHIN1Q6K0P9 492 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 ZNF562Q6V9R5 426 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 PDPNQ86YL7 162 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 ZNF695Q8IW36 515 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 OR8U1Q8NH10 309 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms