RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 TCTEX1D2Q8WW35 142 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 ST8SIA2Q92186 375 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 CCL13Q99616 98 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.85□□□□□ -1.31
CHD4-208ENST00000540960 LSM5Q9Y4Y9 91 aaKnown RBP6.85□□□□□ -1.31
CHD4-208ENST00000540960 WSB1Q9Y6I7 421 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 LOC105371242A0A075B767 164 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 ADAM20O43506 726 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 TSPAN9O75954 239 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 HPRT1P00492 218 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 HRASP01112 189 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 MBPP02686 304 aaPredicted RBP6.84□□□□□ -1.31
CHD4-208ENST00000540960 GYPAP02724 150 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 CGB3P0DN86 165 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 CGB7P0DN87 165 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 OMGP23515 440 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 PPP1CCP36873 323 aaKnown RBP6.84□□□□□ -1.31
CHD4-208ENST00000540960 LPAR6P43657 344 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 ATP5IP56385 69 aaPredicted RBP6.84□□□□□ -1.31
CHD4-208ENST00000540960 KRTAP10-3P60369 221 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 HBG1P69891 147 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 HBG2P69892 147 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 RTL8BQ17RB0 113 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 MST1LQ2TV78 715 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 KPRPQ5T749 579 aaPredicted RBP6.84□□□□□ -1.31
CHD4-208ENST00000540960 HEPN1Q6WQI6 88 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 H2BFWTQ7Z2G1 175 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 SPAG16Q8N0X2 631 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 OR2C3Q8N628 320 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 OR4S2Q8NH73 311 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 FAM110DQ8TAY7 271 aaPredicted RBP6.84□□□□□ -1.31
CHD4-208ENST00000540960 RNF141Q8WVD5 230 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 C22orf15Q8WYQ4 148 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 ZNF714Q96N38 554 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 ABHD14AQ9BUJ0 271 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 RPUSD1Q9UJJ7 312 aaKnown RBP6.84□□□□□ -1.31
CHD4-208ENST00000540960 PSG11Q9UQ72 335 aa6.84□□□□□ -1.31
CHD4-208ENST00000540960 M0QZ24 198 aa6.83□□□□□ -1.32
CHD4-208ENST00000540960 NDUFS8O00217 210 aa6.83□□□□□ -1.32
CHD4-208ENST00000540960 SOX15O60248 233 aa6.83□□□□□ -1.32
CHD4-208ENST00000540960 SSTR5P35346 364 aa6.83□□□□□ -1.32
CHD4-208ENST00000540960 PRRX1P54821 245 aa6.83□□□□□ -1.32
CHD4-208ENST00000540960 BLOC1S1P78537 153 aa6.83□□□□□ -1.32
CHD4-208ENST00000540960 LCE2DQ5TA82 110 aaPredicted RBP6.83□□□□□ -1.32
CHD4-208ENST00000540960 RUSC1-AS1Q66K80 236 aa6.83□□□□□ -1.32
CHD4-208ENST00000540960 MRPL41Q8IXM3 137 aaKnown RBP6.83□□□□□ -1.32
CHD4-208ENST00000540960 FGFRL1Q8N441 504 aa6.83□□□□□ -1.32
CHD4-208ENST00000540960 UBAC2Q8NBM4 344 aa6.83□□□□□ -1.32
CHD4-208ENST00000540960 OR8B3Q8NGG8 313 aa6.83□□□□□ -1.32
CHD4-208ENST00000540960 GNPNAT1Q96EK6 184 aaPredicted RBP6.83□□□□□ -1.32
CHD4-208ENST00000540960 SAT2Q96F10 170 aaPredicted RBP6.83□□□□□ -1.32
CHD4-208ENST00000540960 OR8B2Q96RD0 313 aa6.83□□□□□ -1.32
CHD4-208ENST00000540960 FKBP11Q9NYL4 201 aa6.83□□□□□ -1.32
CHD4-208ENST00000540960 AMMECR1Q9Y4X0 333 aaPredicted RBP6.83□□□□□ -1.32
CHD4-208ENST00000540960 TRAV39A0A0B4J263 110 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 UMAD1C9J7I0 102 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 H0YIZ8 118 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 TEX46H3BTG2 121 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 M0R1X1 148 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 TNFRSF13BO14836 293 aaPredicted RBP6.82□□□□□ -1.32
CHD4-208ENST00000540960 TXNL1O43396 289 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 TNFSF12O43508 249 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 SYNGR2O43760 224 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 PITX3O75364 302 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 ZNF205O95201 554 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 SPDEFO95238 335 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 IFNA5P01569 189 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 APOA2P02652 100 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 SEC11BP0C7V7 166 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 NQO2P16083 231 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 MC5RP33032 325 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 RAB13P51153 203 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 CAV2P51636 162 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 ATP6V1FQ16864 119 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 FOXRED2Q8IWF2 684 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 LINC00311Q8N616 119 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 OR52E5Q8NH55 327 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 RFESDQ8TAC1 157 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 WFDC12Q8WWY7 111 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 TMEM186Q96B77 213 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 NEIL1Q96FI4 390 aaPredicted RBP6.82□□□□□ -1.32
CHD4-208ENST00000540960 SMIM8Q96KF7 97 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 TSNAXQ99598 290 aaKnown RBP6.82□□□□□ -1.32
CHD4-208ENST00000540960 CITED1Q99966 193 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 AGMATQ9BSE5 352 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 PCGF1Q9BSM1 259 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 LPAR2Q9HBW0 351 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 LYRM2Q9NU23 88 aaPredicted RBP6.82□□□□□ -1.32
CHD4-208ENST00000540960 HIF1ANQ9NWT6 349 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 SDHAF2Q9NX18 166 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 OR5AC2Q9NZP5 309 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 RNF150Q9ULK6 438 aa6.82□□□□□ -1.32
CHD4-208ENST00000540960 HEATR1Q9H583 2144 aaKnown RBP6.82□□□□□ -1.32
CHD4-208ENST00000540960 CSMD3Q7Z407 3707 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 A0A087X0M5 115 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 A0A1B0GX30 115 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 MPTX1A8MV57 137 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 DVL1O14640 695 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 RBMXL2O75526 392 aaKnown RBP6.81□□□□□ -1.32
CHD4-208ENST00000540960 IGLV2-14P01704 120 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms