RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 RBMY1FQ15415 496 aaKnown RBP3.35□□□□□ -1.87
SNHG1-214ENST00000540865 MED22Q15528 200 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 ANXA2RQ3ZCQ2 193 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 FAM106AQ4KMX7 169 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 RPL39P5Q59GN2 51 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 LPCAT4Q643R3 524 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 GLT8D1Q68CQ7 371 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 DMKNQ6E0U4 476 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-214ENST00000540865 OR4A47Q6IF82 309 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 GLDNQ6ZMI3 551 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-214ENST00000540865 Q6ZR54 194 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 RBPMS2Q6ZRY4 209 aaKnown RBP3.35□□□□□ -1.87
SNHG1-214ENST00000540865 PDPNQ86YL7 162 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 OR11H2Q8NH07 326 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 KCNG3Q8TAE7 436 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 CACNG8Q8WXS5 425 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 MARC2Q969Z3 335 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 GALMQ96C23 342 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 GALNT14Q96FL9 552 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 SPAG8Q99932 426 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-214ENST00000540865 RNF126Q9BV68 326 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 C6orf62Q9GZU0 229 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-214ENST00000540865 CSTL1Q9H114 145 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 EXOSC1Q9Y3B2 195 aaKnown RBP3.35□□□□□ -1.87
SNHG1-214ENST00000540865 TRAV10A0A0B4J240 114 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 ZNF320A2RRD8 509 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 FAM90A7PA6NKC0 464 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 PPP5D1E7EU14 171 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 H3BNX3 289 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 M0R129 80 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 TSPAN4O14817 238 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 OR2C1O95371 312 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 HLA-AP01891 365 aaKnown RBP3.34□□□□□ -1.87
SNHG1-214ENST00000540865 AMBPP02760 352 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 CRYGBP07316 175 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 C8orf88P0DMB2 117 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 HOXB6P17509 224 aaKnown RBP3.34□□□□□ -1.87
SNHG1-214ENST00000540865 RPL35AP18077 110 aaKnown RBP3.34□□□□□ -1.87
SNHG1-214ENST00000540865 SERPINA2P20848 420 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 ATP6V1E1P36543 226 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 CAPGP40121 348 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 PJVKQ0ZLH3 352 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 RIPK1Q13546 671 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 GPR176Q14439 515 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 ODF3L2Q3SX64 289 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 SLC25A30Q5SVS4 291 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 C12orf73Q69YU5 71 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 RAB12Q6IQ22 244 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 BTNL8Q6UX41 500 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 DHFR2Q86XF0 187 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 HS3ST5Q8IZT8 346 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 NECAP1Q8NC96 275 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 OR51A2Q8NGJ7 313 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 OR13C5Q8NGS8 318 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 OR4A5Q8NH83 315 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 IL4I1Q96RQ9 567 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 S100A13Q99584 98 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 PHB2Q99623 299 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 C5orf66Q9H5L9 145 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 RPL36Q9Y3U8 105 aaKnown RBP3.34□□□□□ -1.87
SNHG1-214ENST00000540865 PEX16Q9Y5Y5 336 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 SELENOKQ9Y6D0 94 aa3.34□□□□□ -1.87
SNHG1-214ENST00000540865 A0A1W2PP11 408 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 TMEM212A6NML5 194 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 IGLV2-23P01705 113 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 APOA2P02652 100 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 INAFM2P0DMQ5 153 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 MYOD1P15172 320 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 FUT3P21217 361 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 GALP22466 123 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 HLA-DMBP28068 263 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 ZNF93P35789 620 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-214ENST00000540865 ARL3P36405 182 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 HMGN3Q15651 99 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 MRGPRG-AS1Q2M3A8 158 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 C15orf32Q32M92 178 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 SLC22A6Q4U2R8 563 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 C1orf134Q5TEV5 83 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 LAMTOR1Q6IAA8 161 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 Q6ZTC4 211 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 C5orf24Q7Z6I8 188 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 SLC25A42Q86VD7 318 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 DEFB107AQ8IZN7 70 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 CENPSQ8N2Z9 138 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 TTC9CQ8N5M4 171 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 ZNF383Q8NA42 475 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 SETD9Q8NE22 299 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 MRPL30Q8TCC3 161 aaKnown RBP3.33□□□□□ -1.88
SNHG1-214ENST00000540865 CD300LFQ8TDQ1 290 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 FAM46BQ96A09 425 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 NRBF2Q96F24 287 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 ABHD14BQ96IU4 210 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 MYCBPQ99417 103 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-214ENST00000540865 AGMATQ9BSE5 352 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 RIBC2Q9H4K1 309 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 TMEM138Q9NPI0 162 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 MRPL27Q9P0M9 148 aaKnown RBP3.33□□□□□ -1.88
SNHG1-214ENST00000540865 ABRACLQ9P1F3 81 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 UBQLN2Q9UHD9 624 aa3.33□□□□□ -1.88
SNHG1-214ENST00000540865 DNAH8Q96JB1 4490 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms