RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 GLIPR1L1Q6UWM5 242 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 CDH26Q8IXH8 852 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 TCTE3Q8IZS6 198 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 SLC7A5P1Q8MH63 180 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 TOMM5Q8N4H5 51 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 LFNGQ8NES3 379 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 OR9G4Q8NGQ1 327 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 OR13C5Q8NGS8 318 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 IL17DQ8TAD2 202 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 LINC00476Q8WZB0 136 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 TRIM63Q969Q1 353 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 SMIM19Q96E16 107 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 MS4A10Q96PG2 267 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 RNF5Q99942 180 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 C7orf50Q9BRJ6 194 aaKnown RBP5.54□□□□□ -1.52
YBX3-209ENST00000540747 AGMATQ9BSE5 352 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 MARVELD1Q9BSK0 173 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 FAM103A1Q9BTL3 118 aaKnown RBP5.54□□□□□ -1.52
YBX3-209ENST00000540747 MED28Q9H204 178 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 RANGRFQ9HD47 186 aaPredicted RBP5.54□□□□□ -1.52
YBX3-209ENST00000540747 A0A1W2PPK0 400 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 UBE2QL1A1L167 161 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 H0Y980 276 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 ITGB1BP1O14713 200 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 ST8SIA5O15466 376 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 PDCD6O75340 191 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 RBMXL2O75526 392 aaKnown RBP5.53□□□□□ -1.52
YBX3-209ENST00000540747 SPDEFO95238 335 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 NAPSAO96009 420 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 CA2P00918 260 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 TRGV3P03979 118 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 UCHL1P09936 223 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 MGMTP16455 207 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 RRAS2P62070 204 aaPredicted RBP5.53□□□□□ -1.52
YBX3-209ENST00000540747 MOGAT2Q3SYC2 334 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 RPL39P5Q59GN2 51 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 OR2AK2Q8NG84 335 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 GRPEL2Q8TAA5 225 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 C15orf40Q8WUR7 153 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 PGLYRP3Q96LB9 341 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 S100A13Q99584 98 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 FAM110AQ9BQ89 295 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 RSRP1Q9BUV0 290 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 BANF2Q9H503 90 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 COPZ2Q9P299 210 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 SLC23A1Q9UHI7 598 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 RNF150Q9ULK6 438 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 SPATA2Q9UM82 520 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 WASHC3Q9Y3C0 194 aa5.53□□□□□ -1.52
YBX3-209ENST00000540747 AK6Q9Y3D8 172 aaKnown RBP5.53□□□□□ -1.52
YBX3-209ENST00000540747 FAT2Q9NYQ8 4349 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 DYNC1H1Q14204 4646 aaKnown RBP5.52□□□□□ -1.53
YBX3-209ENST00000540747 DNAH17Q9UFH2 4485 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 RBMY1BA6NDE4 496 aaKnown RBP5.52□□□□□ -1.53
YBX3-209ENST00000540747 RBMY1EA6NEQ0 496 aaKnown RBP5.52□□□□□ -1.53
YBX3-209ENST00000540747 RAB29O14966 203 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 GSTZ1O43708 216 aaPredicted RBP5.52□□□□□ -1.53
YBX3-209ENST00000540747 IGLV2-23P01705 113 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 TRBV12-3P01733 135 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 C1QBP02746 253 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 IGKV1-16P04430 117 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 CRYGBP07316 175 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 H2AFB2P0C5Z0 115 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 RBMY1DP0C7P1 496 aaKnown RBP5.52□□□□□ -1.53
YBX3-209ENST00000540747 SRMP19623 302 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 MAPK3P27361 379 aaPredicted RBP5.52□□□□□ -1.53
YBX3-209ENST00000540747 MC5RP33032 325 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 SYNJ2BPP57105 145 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 AP3S2P59780 193 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 DYRK1AQ13627 763 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 MRGPRG-AS1Q2M3A8 158 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 Q499Y3 187 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 YIF1BQ5BJH7 314 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 UBE2NLQ5JXB2 153 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 LCN12Q6JVE5 192 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 ZNF343Q6P1L6 599 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 GLDNQ6ZMI3 551 aaPredicted RBP5.52□□□□□ -1.53
YBX3-209ENST00000540747 OR2K2Q8NGT1 345 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 OR5H6Q8NGV6 325 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 ZFAND1Q8TCF1 268 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 GALMQ96C23 342 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 S100A16Q96FQ6 103 aaKnown RBP5.52□□□□□ -1.53
YBX3-209ENST00000540747 FYTTD1Q96QD9 318 aaKnown RBP5.52□□□□□ -1.53
YBX3-209ENST00000540747 ABHD1Q96SE0 405 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 SULT4A1Q9BR01 284 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 SELENOIQ9C0D9 397 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 TINAGL1Q9GZM7 467 aaPredicted RBP5.52□□□□□ -1.53
YBX3-209ENST00000540747 KCNIP1Q9NZI2 227 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 PIPOXQ9P0Z9 390 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 METTL1Q9UBP6 276 aaKnown RBP5.52□□□□□ -1.53
YBX3-209ENST00000540747 V9GY05 133 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 PKHD1P08F94 4074 aa5.52□□□□□ -1.53
YBX3-209ENST00000540747 ABCA13Q86UQ4 5058 aa5.51□□□□□ -1.53
YBX3-209ENST00000540747 DNAH11Q96DT5 4516 aa5.51□□□□□ -1.53
YBX3-209ENST00000540747 TRAV6A0A075B6T7 132 aa5.51□□□□□ -1.53
YBX3-209ENST00000540747 TRBV6-6A0A0A6YYG2 114 aa5.51□□□□□ -1.53
YBX3-209ENST00000540747 A0A0G2JLM5 398 aa5.51□□□□□ -1.53
YBX3-209ENST00000540747 NAP1L6A6NFF2 107 aa5.51□□□□□ -1.53
YBX3-209ENST00000540747 ZNF785A8K8V0 405 aa5.51□□□□□ -1.53
YBX3-209ENST00000540747 CTDSPLO15194 276 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms