RNA–Protein interactions for RNA: ENST00000540643.5

SFI1-229, Transcript of SFI1 centrin binding protein, human

APPRIS ALT2 TSL 2 BASIC

Gene SFI1, Length 4,226 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-229	ENST00000540643	MDC1	Q14676	2089 aa	Known RBP	11.12	□□□□□ -0.63
SFI1-229	ENST00000540643		H3BMG7	143 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	GDF1	P27539	372 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	TM4SF4	P48230	202 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	GATAD1	Q8WUU5	269 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	CRISPLD2	Q9H0B8	497 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	MS4A6A	Q9H2W1	248 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643		A0A087WV48	116 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	NCBP2L	A6PVI3	153 aa	Known RBP	11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	OR11H12	B2RN74	326 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	CFHR2	P36980	270 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	HHEX	Q03014	270 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	KREMEN2	Q8NCW0	462 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	OR11H1	Q8NG94	326 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	OR11H2	Q8NH07	326 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	SLC25A33	Q9BSK2	321 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	GPR75	O95800	540 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	CRYBB3	P26998	211 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	EMD	P50402	254 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	PRDX1	Q06830	199 aa	Known RBP	11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	LYPD6B	Q8NI32	183 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	KISS1R	Q969F8	398 aa	Predicted RBP	11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	ZNF414	Q96IQ9	312 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	FER1L6-AS2	Q96M78	137 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	CCL28	Q9NRJ3	127 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	PSG8	Q9UQ74	426 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643	KIAA2026	Q5HYC2	2103 aa		11.12	□□□□□ -0.63
SFI1-229	ENST00000540643		A0A1W2PPM0	123 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643		A0A1W2PS18	150 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	PRSS29P	A6NIE9	313 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643		A8MWL6	223 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	NRG2	O14511	850 aa	Predicted RBP	11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	CTGF	P29279	349 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	C8orf86	Q6ZUL3	223 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	ZADH2	Q8N4Q0	377 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	KLHDC9	Q8NEP7	349 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	TMEM230	Q96A57	120 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	SPANXA1	Q9NS26	97 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	OR9G9	P0C7N8	305 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	OPRK1	P41145	380 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	SSBP2	P81877	361 aa	Predicted RBP	11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	OR10J3	Q5JRS4	329 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	SLC23A3	Q6PIS1	610 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	SPSB3	Q6PJ21	355 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	WFDC3	Q8IUB2	231 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	NEUROG1	Q92886	237 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	ZNF646	O15015	1829 aa	Predicted RBP	11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	SCN4A	P35499	1836 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	LOC102723996	A0A087X1L8	192 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643		A0A0B4J2E0	115 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643		A0A1B0GX12	115 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	PRKN	O60260	465 aa	Predicted RBP	11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	ZNF121	P58317	390 aa	Predicted RBP	11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	ZNF415	Q09FC8	603 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643		P01737	135 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	KIR2DL2	P43627	348 aa	Predicted RBP	11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	ALKAL1	Q6UXT8	129 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	RPE	Q96AT9	228 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	NDFIP1	Q9BT67	221 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	KLF12	Q9Y4X4	402 aa		11.11	□□□□□ -0.63
SFI1-229	ENST00000540643	UPK3A	O75631	287 aa		11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	TMEM50A	O95807	157 aa		11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	MMAB	Q96EY8	250 aa	Predicted RBP	11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	C18orf15	Q96N68	181 aa		11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	GFI1	Q99684	422 aa		11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	HSD17B10	Q99714	261 aa	Known RBP	11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	ZNF355P	Q9NSJ1	428 aa		11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	MIA3	Q5JRA6	1907 aa		11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	IGHG1	P01857	330 aa		11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	SLC25A5	P05141	298 aa	Known RBP	11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	CLLU1OS	Q5K130	101 aa		11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	TMEM215	Q68D42	235 aa		11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	C1orf162	Q8NEQ5	155 aa	Predicted RBP	11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	OR1L8	Q8NGR8	309 aa		11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	VSIR	Q9H7M9	311 aa		11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	PTPRZ1	P23471	2315 aa	Predicted RBP	11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	TNFRSF6B	O95407	300 aa		11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	COL8A1	P27658	744 aa		11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	FOXL1	Q12952	345 aa		11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	TMEM155	Q4W5P6	130 aa		11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	LCNL1	Q6ZST4	164 aa		11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	OR5AS1	Q8N127	324 aa		11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	ZNF502	Q8TBZ5	544 aa		11.1	□□□□□ -0.63
SFI1-229	ENST00000540643	SCO2	A0A1W2PP80	73 aa		11.09	□□□□□ -0.63
SFI1-229	ENST00000540643	IGFBP4	P22692	258 aa		11.09	□□□□□ -0.63
SFI1-229	ENST00000540643	SRSF2	Q01130	221 aa	Known RBP	11.09	□□□□□ -0.63
SFI1-229	ENST00000540643	TCTEX1D4	Q5JR98	221 aa		11.09	□□□□□ -0.63
SFI1-229	ENST00000540643	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	11.09	□□□□□ -0.63	1e-6	■■■■■ 28.8
SFI1-229	ENST00000540643	ANKRD33	Q7Z3H0	272 aa		11.09	□□□□□ -0.63
SFI1-229	ENST00000540643	OR13H1	Q8NG92	308 aa		11.09	□□□□□ -0.63
SFI1-229	ENST00000540643	CT55	Q8WUE5	264 aa		11.09	□□□□□ -0.63
SFI1-229	ENST00000540643	GGTLC1	Q9BX51	225 aa		11.09	□□□□□ -0.63
SFI1-229	ENST00000540643		A0A1W2PRE2	83 aa		11.09	□□□□□ -0.63
SFI1-229	ENST00000540643	ZNF716	A6NP11	495 aa		11.09	□□□□□ -0.63
SFI1-229	ENST00000540643		M0QZQ0	153 aa		11.09	□□□□□ -0.63
SFI1-229	ENST00000540643	GATA2	P23769	480 aa	Predicted RBP	11.09	□□□□□ -0.63
SFI1-229	ENST00000540643	PGF	P49763	221 aa		11.09	□□□□□ -0.63
SFI1-229	ENST00000540643	CENPW	Q5EE01	88 aa		11.09	□□□□□ -0.63
SFI1-229	ENST00000540643	OCC1	Q8TAD7	63 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms