RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 HEPN1Q6WQI6 88 aa13.9□□□□□ -0.18
COPS3-212ENST00000539941 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.9□□□□□ -0.18
COPS3-212ENST00000539941 H1FXQ92522 213 aaKnown RBP13.9□□□□□ -0.18
COPS3-212ENST00000539941 C5orf30Q96GV9 206 aa13.9□□□□□ -0.18
COPS3-212ENST00000539941 ABHD14AQ9BUJ0 271 aa13.9□□□□□ -0.18
COPS3-212ENST00000539941 SEC14L6B5MCN3 397 aa13.89□□□□□ -0.19
COPS3-212ENST00000539941 F12P00748 615 aaPredicted RBP13.89□□□□□ -0.19
COPS3-212ENST00000539941 SRSF3P84103 164 aaKnown RBP13.89□□□□□ -0.19
COPS3-212ENST00000539941 NMSQ5H8A3 153 aa13.89□□□□□ -0.19
COPS3-212ENST00000539941 ZNF383Q8NA42 475 aa13.89□□□□□ -0.19
COPS3-212ENST00000539941 ABHD14BQ96IU4 210 aa13.89□□□□□ -0.19
COPS3-212ENST00000539941 NEU1Q99519 415 aa13.89□□□□□ -0.19
COPS3-212ENST00000539941 IFI27L2Q9H2X8 130 aa13.89□□□□□ -0.19
COPS3-212ENST00000539941 TEX15Q9BXT5 2789 aa13.88□□□□□ -0.19
COPS3-212ENST00000539941 A0A1W2PPE3 182 aa13.88□□□□□ -0.19
COPS3-212ENST00000539941 SLC25A6P12236 298 aa13.88□□□□□ -0.19
COPS3-212ENST00000539941 EFNA4P52798 201 aa13.88□□□□□ -0.19
COPS3-212ENST00000539941 RAB32Q13637 225 aa13.88□□□□□ -0.19
COPS3-212ENST00000539941 HNF4GQ14541 408 aa13.88□□□□□ -0.19
COPS3-212ENST00000539941 ZNF439Q8NDP4 499 aa13.88□□□□□ -0.19
COPS3-212ENST00000539941 OR8B3Q8NGG8 313 aa13.88□□□□□ -0.19
COPS3-212ENST00000539941 LSM10Q969L4 123 aaKnown RBP13.88□□□□□ -0.19
COPS3-212ENST00000539941 RAB24Q969Q5 203 aa13.88□□□□□ -0.19
COPS3-212ENST00000539941 NEIL1Q96FI4 390 aaPredicted RBP13.88□□□□□ -0.19
COPS3-212ENST00000539941 OR8B2Q96RD0 313 aa13.88□□□□□ -0.19
COPS3-212ENST00000539941 RNF126Q9BV68 326 aa13.88□□□□□ -0.19
COPS3-212ENST00000539941 ITPR2Q14571 2701 aa13.88□□□□□ -0.19
COPS3-212ENST00000539941 NOTCH2Q04721 2471 aa13.88□□□□□ -0.19
COPS3-212ENST00000539941 ZNF16P17020 682 aaPredicted RBP13.88□□□□□ -0.19
COPS3-212ENST00000539941 DDTP30046 118 aa13.88□□□□□ -0.19
COPS3-212ENST00000539941 CDKN1AP38936 164 aa13.88□□□□□ -0.19
COPS3-212ENST00000539941 PRAMEF5Q5TYX0 476 aa13.88□□□□□ -0.19
COPS3-212ENST00000539941 ZNF841Q6ZN19 808 aa13.88□□□□□ -0.19
COPS3-212ENST00000539941 H0YIZ8 118 aa13.87□□□□□ -0.19
COPS3-212ENST00000539941 OVOL3O00110 214 aa13.87□□□□□ -0.19
COPS3-212ENST00000539941 ZNF134P52741 427 aa13.87□□□□□ -0.19
COPS3-212ENST00000539941 ZNF585BQ52M93 769 aa13.87□□□□□ -0.19
COPS3-212ENST00000539941 CT45A1Q5HYN5 189 aa13.87□□□□□ -0.19
COPS3-212ENST00000539941 OR4D5Q8NGN0 318 aa13.87□□□□□ -0.19
COPS3-212ENST00000539941 CT45A3Q8NHU0 189 aa13.87□□□□□ -0.19
COPS3-212ENST00000539941 CD300LFQ8TDQ1 290 aa13.87□□□□□ -0.19
COPS3-212ENST00000539941 CYTL1Q9NRR1 136 aa13.87□□□□□ -0.19
COPS3-212ENST00000539941 A0A1W2PPH5 198 aa13.86□□□□□ -0.19
COPS3-212ENST00000539941 C7orf77A4D0Y5 90 aa13.86□□□□□ -0.19
COPS3-212ENST00000539941 BTBD17A6NE02 478 aa13.86□□□□□ -0.19
COPS3-212ENST00000539941 RAB29O14966 203 aa13.86□□□□□ -0.19
COPS3-212ENST00000539941 LY6HO94772 140 aa13.86□□□□□ -0.19
COPS3-212ENST00000539941 PAX1P15863 534 aa13.86□□□□□ -0.19
COPS3-212ENST00000539941 DLX6P56179 175 aa13.86□□□□□ -0.19
COPS3-212ENST00000539941 S100A10P60903 97 aa13.86□□□□□ -0.19
COPS3-212ENST00000539941 RPL30P62888 115 aaKnown RBP13.86□□□□□ -0.19
COPS3-212ENST00000539941 PYY3Q5JQD4 70 aa13.86□□□□□ -0.19
COPS3-212ENST00000539941 ZNF787Q6DD87 383 aa13.86□□□□□ -0.19
COPS3-212ENST00000539941 BTNL8Q6UX41 500 aa13.86□□□□□ -0.19
COPS3-212ENST00000539941 SLC25A48Q6ZT89 311 aaKnown RBP13.86□□□□□ -0.19
COPS3-212ENST00000539941 C8orf31Q8N9H6 132 aa13.86□□□□□ -0.19
COPS3-212ENST00000539941 C8orf46Q8TAG6 207 aa13.86□□□□□ -0.19
COPS3-212ENST00000539941 TMED6Q8WW62 240 aa13.86□□□□□ -0.19
COPS3-212ENST00000539941 DCUN1D4Q92564 292 aa13.86□□□□□ -0.19
COPS3-212ENST00000539941 HRH4Q9H3N8 390 aa13.86□□□□□ -0.19
COPS3-212ENST00000539941 TMEM231Q9H6L2 316 aa13.86□□□□□ -0.19
COPS3-212ENST00000539941 HRNRQ86YZ3 2850 aaPredicted RBP13.86□□□□□ -0.19
COPS3-212ENST00000539941 A0A1B0GU03 582 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 TCAPO15273 167 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 DEDDO75618 318 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 MMP23AO75900 390 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 CCL3L1P16619 93 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 DUTP33316 252 aaKnown RBP13.85□□□□□ -0.19
COPS3-212ENST00000539941 SULT1A2P50226 295 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 BTNL3Q6UXE8 466 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 IGFBPL1Q8WX77 278 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 AQP10Q96PS8 301 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 PRDM13Q9H4Q3 707 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 FAM157AC9JC47 383 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 ST8SIA3O43173 380 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 TGOLN2O43493 480 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 IGKV1-39P01597 117 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 MBPP02686 304 aaPredicted RBP13.85□□□□□ -0.19
COPS3-212ENST00000539941 RBP4P02753 201 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 IGKV1D-39P04432 117 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 KIR2DS2P43631 304 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 LPAR6P43657 344 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 GPR6P46095 362 aaPredicted RBP13.85□□□□□ -0.19
COPS3-212ENST00000539941 KIAA0141Q14154 515 aaPredicted RBP13.85□□□□□ -0.19
COPS3-212ENST00000539941 ANKRD39Q53RE8 183 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 AWAT1Q58HT5 328 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 WDR25Q64LD2 544 aaPredicted RBP13.85□□□□□ -0.19
COPS3-212ENST00000539941 FAM219AQ8IW50 185 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 OR5R1Q8NH85 324 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 RRNAD1Q96FB5 475 aaKnown RBP13.85□□□□□ -0.19
COPS3-212ENST00000539941 NOL4LQ96MY1 436 aaPredicted RBP13.85□□□□□ -0.19
COPS3-212ENST00000539941 SMDT1Q9H4I9 107 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 PATZ1Q9HBE1 687 aaKnown RBP13.85□□□□□ -0.19
COPS3-212ENST00000539941 OR5AC2Q9NZP5 309 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 FAM96BQ9Y3D0 163 aa13.85□□□□□ -0.19
COPS3-212ENST00000539941 USF3Q68DE3 2245 aa13.84□□□□□ -0.19
COPS3-212ENST00000539941 A0A087X0M5 115 aa13.84□□□□□ -0.19
COPS3-212ENST00000539941 A0A1B0GX30 115 aa13.84□□□□□ -0.19
COPS3-212ENST00000539941 C17orf98A8MV24 154 aa13.84□□□□□ -0.19
COPS3-212ENST00000539941 K7EPK0 472 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms