RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 GABARAPL2P60520 117 aa11.69□□□□□ -0.54
UBE3B-211ENST00000539843 SSBP2P81877 361 aaPredicted RBP11.69□□□□□ -0.54
UBE3B-211ENST00000539843 RHOGP84095 191 aa11.69□□□□□ -0.54
UBE3B-211ENST00000539843 DYRK1AQ13627 763 aa11.69□□□□□ -0.54
UBE3B-211ENST00000539843 EXOSC2Q13868 293 aaKnown RBP11.69□□□□□ -0.54
UBE3B-211ENST00000539843 CDNFQ49AH0 187 aa11.69□□□□□ -0.54
UBE3B-211ENST00000539843 IDO2Q6ZQW0 420 aa11.69□□□□□ -0.54
UBE3B-211ENST00000539843 OR4S2Q8NH73 311 aa11.69□□□□□ -0.54
UBE3B-211ENST00000539843 DYNLRB2Q8TF09 96 aa11.69□□□□□ -0.54
UBE3B-211ENST00000539843 DDB2Q92466 427 aa11.69□□□□□ -0.54
UBE3B-211ENST00000539843 Q9H521 79 aa11.69□□□□□ -0.54
UBE3B-211ENST00000539843 RAB26Q9ULW5 256 aa11.69□□□□□ -0.54
UBE3B-211ENST00000539843 NOTOA8MTQ0 251 aa11.68□□□□□ -0.54
UBE3B-211ENST00000539843 J3QRK9 145 aa11.68□□□□□ -0.54
UBE3B-211ENST00000539843 SAA1P0DJI8 122 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-211ENST00000539843 SNRPBP14678 240 aaKnown RBP11.68□□□□□ -0.54
UBE3B-211ENST00000539843 PSMB9P28065 219 aa11.68□□□□□ -0.54
UBE3B-211ENST00000539843 DEFA5Q01523 94 aa11.68□□□□□ -0.54
UBE3B-211ENST00000539843 HACD4Q5VWC8 232 aa11.68□□□□□ -0.54
UBE3B-211ENST00000539843 TPRA1Q86W33 373 aa11.68□□□□□ -0.54
UBE3B-211ENST00000539843 NECAP1Q8NC96 275 aa11.68□□□□□ -0.54
UBE3B-211ENST00000539843 FCGR1BQ92637 280 aa11.68□□□□□ -0.54
UBE3B-211ENST00000539843 KCTD12Q96CX2 325 aaKnown RBP11.68□□□□□ -0.54
UBE3B-211ENST00000539843 HSD17B10Q99714 261 aaKnown RBP11.68□□□□□ -0.54
UBE3B-211ENST00000539843 ZNF430Q9H8G1 570 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-211ENST00000539843 C19orf73Q9NVV2 129 aa11.68□□□□□ -0.54
UBE3B-211ENST00000539843 SLC2A8Q9NY64 477 aa11.68□□□□□ -0.54
UBE3B-211ENST00000539843 RBMX2Q9Y388 322 aaKnown RBP11.68□□□□□ -0.54
UBE3B-211ENST00000539843 LINC00473A8K010 186 aa11.67□□□□□ -0.54
UBE3B-211ENST00000539843 ARPC4P59998 168 aa11.67□□□□□ -0.54
UBE3B-211ENST00000539843 CNIH2Q6PI25 160 aa11.67□□□□□ -0.54
UBE3B-211ENST00000539843 LAX1Q8IWV1 398 aa11.67□□□□□ -0.54
UBE3B-211ENST00000539843 Q8N1Y9 231 aa11.67□□□□□ -0.54
UBE3B-211ENST00000539843 TCTEX1D2Q8WW35 142 aa11.67□□□□□ -0.54
UBE3B-211ENST00000539843 C5orf30Q96GV9 206 aa11.67□□□□□ -0.54
UBE3B-211ENST00000539843 AIFM2Q9BRQ8 373 aa11.67□□□□□ -0.54
UBE3B-211ENST00000539843 OR51E2Q9H255 320 aa11.67□□□□□ -0.54
UBE3B-211ENST00000539843 AKIP1Q9NQ31 210 aa11.67□□□□□ -0.54
UBE3B-211ENST00000539843 SSR3Q9UNL2 185 aa11.67□□□□□ -0.54
UBE3B-211ENST00000539843 ZNF257Q9Y2Q1 563 aa11.67□□□□□ -0.54
UBE3B-211ENST00000539843 SHISA3A0PJX4 238 aa11.66□□□□□ -0.54
UBE3B-211ENST00000539843 TPPPO94811 219 aa11.66□□□□□ -0.54
UBE3B-211ENST00000539843 CSN3P07498 182 aa11.66□□□□□ -0.54
UBE3B-211ENST00000539843 NFYAP23511 347 aaPredicted RBP11.66□□□□□ -0.54
UBE3B-211ENST00000539843 MAS1LP35410 378 aa11.66□□□□□ -0.54
UBE3B-211ENST00000539843 KIR2DS2P43631 304 aa11.66□□□□□ -0.54
UBE3B-211ENST00000539843 OR2B11Q5JQS5 317 aa11.66□□□□□ -0.54
UBE3B-211ENST00000539843 TTC9CQ8N5M4 171 aa11.66□□□□□ -0.54
UBE3B-211ENST00000539843 OR2A7Q96R45 310 aa11.66□□□□□ -0.54
UBE3B-211ENST00000539843 DAPK2Q9UIK4 370 aa11.66□□□□□ -0.54
UBE3B-211ENST00000539843 HRASP01112 189 aa11.65□□□□□ -0.54
UBE3B-211ENST00000539843 TRBV12-3P01733 135 aa11.65□□□□□ -0.54
UBE3B-211ENST00000539843 HLA-DQB1P01920 261 aa11.65□□□□□ -0.54
UBE3B-211ENST00000539843 FGF9P31371 208 aaPredicted RBP11.65□□□□□ -0.54
UBE3B-211ENST00000539843 RPL27AP46776 148 aaKnown RBP11.65□□□□□ -0.54
UBE3B-211ENST00000539843 CD81P60033 236 aa11.65□□□□□ -0.54
UBE3B-211ENST00000539843 C15orf32Q32M92 178 aa11.65□□□□□ -0.54
UBE3B-211ENST00000539843 ZNF66Q6ZN08 573 aa11.65□□□□□ -0.54
UBE3B-211ENST00000539843 IL17DQ8TAD2 202 aa11.65□□□□□ -0.54
UBE3B-211ENST00000539843 NUDCD2Q8WVJ2 157 aa11.65□□□□□ -0.54
UBE3B-211ENST00000539843 SPATA2Q9UM82 520 aa11.65□□□□□ -0.54
UBE3B-211ENST00000539843 RRP15Q9Y3B9 282 aaKnown RBP11.65□□□□□ -0.54
UBE3B-211ENST00000539843 IGKV1D-8A0A087WSZ0 117 aa11.64□□□□□ -0.55
UBE3B-211ENST00000539843 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.64□□□□□ -0.55
UBE3B-211ENST00000539843 TRBV9A0A0B4J1U6 114 aa11.64□□□□□ -0.55
UBE3B-211ENST00000539843 SMIM30A4D0T7 59 aa11.64□□□□□ -0.55
UBE3B-211ENST00000539843 TMEM235A6NFC5 223 aa11.64□□□□□ -0.55
UBE3B-211ENST00000539843 GGCTO75223 188 aaKnown RBP11.64□□□□□ -0.55
UBE3B-211ENST00000539843 OR2J3O76001 311 aa11.64□□□□□ -0.55
UBE3B-211ENST00000539843 KBTBD11O94819 623 aa11.64□□□□□ -0.55
UBE3B-211ENST00000539843 PRH1P02810 166 aa11.64□□□□□ -0.55
UBE3B-211ENST00000539843 HAGHQ16775 308 aa11.64□□□□□ -0.55
UBE3B-211ENST00000539843 UBE2UQ5VVX9 321 aa11.64□□□□□ -0.55
UBE3B-211ENST00000539843 ZFAND6Q6FIF0 208 aa11.64□□□□□ -0.55
UBE3B-211ENST00000539843 IL34Q6ZMJ4 242 aa11.64□□□□□ -0.55
UBE3B-211ENST00000539843 FYTTD1Q96QD9 318 aaKnown RBP11.64□□□□□ -0.55
UBE3B-211ENST00000539843 TXNL4BQ9NX01 149 aaKnown RBP11.64□□□□□ -0.55
UBE3B-211ENST00000539843 ANXA10Q9UJ72 324 aa11.64□□□□□ -0.55
UBE3B-211ENST00000539843 NPIPB5A8MRT5 1133 aa11.63□□□□□ -0.55
UBE3B-211ENST00000539843 BMPR1BO00238 502 aa11.63□□□□□ -0.55
UBE3B-211ENST00000539843 DEFA4P12838 97 aa11.63□□□□□ -0.55
UBE3B-211ENST00000539843 HIST1H1BP16401 226 aaKnown RBP11.63□□□□□ -0.55
UBE3B-211ENST00000539843 SCAND1P57086 179 aa11.63□□□□□ -0.55
UBE3B-211ENST00000539843 CATR1Q13166 79 aa11.63□□□□□ -0.55
UBE3B-211ENST00000539843 SFXN4Q6P4A7 337 aa11.63□□□□□ -0.55
UBE3B-211ENST00000539843 LGALS14Q8TCE9 139 aa11.63□□□□□ -0.55
UBE3B-211ENST00000539843 RHBDL2Q9NX52 303 aa11.63□□□□□ -0.55
UBE3B-211ENST00000539843 TAS2R8Q9NYW2 309 aa11.63□□□□□ -0.55
UBE3B-211ENST00000539843 TECRQ9NZ01 308 aaKnown RBP11.63□□□□□ -0.55
UBE3B-211ENST00000539843 FBXL7Q9UJT9 491 aa11.63□□□□□ -0.55
UBE3B-211ENST00000539843 ETV7Q9Y603 341 aa11.63□□□□□ -0.55
UBE3B-211ENST00000539843 CEPT1Q9Y6K0 416 aa11.63□□□□□ -0.55
UBE3B-211ENST00000539843 CYB5BO43169 146 aa11.62□□□□□ -0.55
UBE3B-211ENST00000539843 RPL8P62917 257 aaKnown RBP11.62□□□□□ -0.55
UBE3B-211ENST00000539843 ZNF45Q02386 682 aa11.62□□□□□ -0.55
UBE3B-211ENST00000539843 GUCA2BQ16661 112 aa11.62□□□□□ -0.55
UBE3B-211ENST00000539843 MRGPRG-AS1Q2M3A8 158 aa11.62□□□□□ -0.55
UBE3B-211ENST00000539843 CD300EQ496F6 205 aaPredicted RBP11.62□□□□□ -0.55
UBE3B-211ENST00000539843 FAM106AQ4KMX7 169 aa11.62□□□□□ -0.55
UBE3B-211ENST00000539843 C10orf55Q5SWW7 151 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms