RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 LRRC37A5PQ49AS3 106 aa13.02□□□□□ -0.32
TRAF3-204ENST00000539721 BRD3OSQ6XYD6 125 aa13.02□□□□□ -0.32
TRAF3-204ENST00000539721 VKORC1L1Q8N0U8 176 aa13.02□□□□□ -0.32
TRAF3-204ENST00000539721 PPP1R1CQ8WVI7 109 aa13.02□□□□□ -0.32
TRAF3-204ENST00000539721 CACNG5Q9UF02 275 aa13.02□□□□□ -0.32
TRAF3-204ENST00000539721 CREBBPQ92793 2442 aa13.02□□□□□ -0.33
TRAF3-204ENST00000539721 SCGB1D2O95969 90 aa13.02□□□□□ -0.33
TRAF3-204ENST00000539721 P0C879 139 aa13.02□□□□□ -0.33
TRAF3-204ENST00000539721 SLC25A6P12236 298 aa13.02□□□□□ -0.33
TRAF3-204ENST00000539721 ARHGDIBP52566 201 aa13.02□□□□□ -0.33
TRAF3-204ENST00000539721 KLF17Q5JT82 389 aaPredicted RBP13.02□□□□□ -0.33
TRAF3-204ENST00000539721 OR1S1Q8NH92 325 aa13.02□□□□□ -0.33
TRAF3-204ENST00000539721 CFHR4Q92496 578 aa13.02□□□□□ -0.33
TRAF3-204ENST00000539721 AJUBAQ96IF1 538 aa13.02□□□□□ -0.33
TRAF3-204ENST00000539721 RHOVQ96L33 236 aa13.02□□□□□ -0.33
TRAF3-204ENST00000539721 AIFM2Q9BRQ8 373 aa13.02□□□□□ -0.33
TRAF3-204ENST00000539721 MS4A7Q9GZW8 240 aaPredicted RBP13.02□□□□□ -0.33
TRAF3-204ENST00000539721 TMEM140Q9NV12 185 aa13.02□□□□□ -0.33
TRAF3-204ENST00000539721 C1QBP02746 253 aa13.01□□□□□ -0.33
TRAF3-204ENST00000539721 CD1BP29016 333 aa13.01□□□□□ -0.33
TRAF3-204ENST00000539721 IL15RAQ13261 267 aa13.01□□□□□ -0.33
TRAF3-204ENST00000539721 Q5BKY6 102 aa13.01□□□□□ -0.33
TRAF3-204ENST00000539721 Q6ZRM9 215 aa13.01□□□□□ -0.33
TRAF3-204ENST00000539721 OR4D5Q8NGN0 318 aa13.01□□□□□ -0.33
TRAF3-204ENST00000539721 SRRM4A7MD48 611 aaKnown RBP13□□□□□ -0.33
TRAF3-204ENST00000539721 VENTXO95231 258 aa13□□□□□ -0.33
TRAF3-204ENST00000539721 PSMB6P28072 239 aa13□□□□□ -0.33
TRAF3-204ENST00000539721 S100A10P60903 97 aa13□□□□□ -0.33
TRAF3-204ENST00000539721 FGL1Q08830 312 aa13□□□□□ -0.33
TRAF3-204ENST00000539721 RAB32Q13637 225 aa13□□□□□ -0.33
TRAF3-204ENST00000539721 HABP2Q14520 560 aaPredicted RBP13□□□□□ -0.33
TRAF3-204ENST00000539721 POU2AF1Q16633 256 aa13□□□□□ -0.33
TRAF3-204ENST00000539721 G3V3Q6 166 aa12.99□□□□□ -0.33
TRAF3-204ENST00000539721 NXPH3O95157 252 aa12.99□□□□□ -0.33
TRAF3-204ENST00000539721 OR9G9P0C7N8 305 aa12.99□□□□□ -0.33
TRAF3-204ENST00000539721 OR4A47Q6IF82 309 aa12.99□□□□□ -0.33
TRAF3-204ENST00000539721 FOXRED2Q8IWF2 684 aa12.99□□□□□ -0.33
TRAF3-204ENST00000539721 LSM5Q9Y4Y9 91 aaKnown RBP12.99□□□□□ -0.33
TRAF3-204ENST00000539721 AKAP9Q99996 3911 aa12.99□□□□□ -0.33
TRAF3-204ENST00000539721 TRAV14DV4A0A0A6YYC5 116 aa12.99□□□□□ -0.33
TRAF3-204ENST00000539721 A0A0U1RQK1 487 aa12.99□□□□□ -0.33
TRAF3-204ENST00000539721 FAM90A9PA6NNJ1 464 aa12.99□□□□□ -0.33
TRAF3-204ENST00000539721 RBMXL2O75526 392 aaKnown RBP12.99□□□□□ -0.33
TRAF3-204ENST00000539721 MPC2O95563 127 aa12.99□□□□□ -0.33
TRAF3-204ENST00000539721 IGKV1D-33P01593 117 aa12.99□□□□□ -0.33
TRAF3-204ENST00000539721 IGKV1-33P01594 117 aa12.99□□□□□ -0.33
TRAF3-204ENST00000539721 MBPP02686 304 aaPredicted RBP12.99□□□□□ -0.33
TRAF3-204ENST00000539721 SAA1P0DJI8 122 aaPredicted RBP12.99□□□□□ -0.33
TRAF3-204ENST00000539721 NKX2-1P43699 371 aaPredicted RBP12.99□□□□□ -0.33
TRAF3-204ENST00000539721 LGALS7P47929 136 aa12.99□□□□□ -0.33
TRAF3-204ENST00000539721 HES1Q14469 280 aa12.99□□□□□ -0.33
TRAF3-204ENST00000539721 NOXA1Q86UR1 476 aa12.99□□□□□ -0.33
TRAF3-204ENST00000539721 RITA1Q96K30 269 aa12.99□□□□□ -0.33
TRAF3-204ENST00000539721 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.99□□□□□ -0.33
TRAF3-204ENST00000539721 COA4Q9NYJ1 87 aa12.99□□□□□ -0.33
TRAF3-204ENST00000539721 NSG2Q9Y328 171 aa12.99□□□□□ -0.33
TRAF3-204ENST00000539721 FAM96BQ9Y3D0 163 aa12.99□□□□□ -0.33
TRAF3-204ENST00000539721 ABCA1O95477 2261 aa12.98□□□□□ -0.33
TRAF3-204ENST00000539721 PITX3O75364 302 aa12.98□□□□□ -0.33
TRAF3-204ENST00000539721 SNRNP70P08621 437 aaKnown RBP12.98□□□□□ -0.33
TRAF3-204ENST00000539721 CD24P25063 80 aa12.98□□□□□ -0.33
TRAF3-204ENST00000539721 BRS3P32247 399 aa12.98□□□□□ -0.33
TRAF3-204ENST00000539721 OR4A16Q8NH70 328 aa12.98□□□□□ -0.33
TRAF3-204ENST00000539721 THAP6Q8TBB0 222 aa12.98□□□□□ -0.33
TRAF3-204ENST00000539721 ZFP57Q9NU63 452 aa12.98□□□□□ -0.33
TRAF3-204ENST00000539721 TRAV3A0A0B4J244 114 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 ST8SIA3O43173 380 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 SNAPC5O75971 98 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 MOSP00540 346 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 IGLV2-23P01705 113 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 PET100P0DJ07 73 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 EIF2B2P49770 351 aaKnown RBP12.97□□□□□ -0.33
TRAF3-204ENST00000539721 OR2B8PP59922 312 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 VMA21Q3ZAQ7 101 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 CXorf66Q5JRM2 361 aaPredicted RBP12.97□□□□□ -0.33
TRAF3-204ENST00000539721 C11orf87Q6NUJ2 197 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 PUSL1Q8N0Z8 303 aaKnown RBP12.97□□□□□ -0.33
TRAF3-204ENST00000539721 OR11H4Q8NGC9 324 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 OR2T10Q8NGZ9 312 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 NANPQ8TBE9 248 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 TSNAXQ99598 290 aaKnown RBP12.97□□□□□ -0.33
TRAF3-204ENST00000539721 RNF5Q99942 180 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 BET1LQ9NYM9 111 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 POMT1Q9Y6A1 747 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 FXYD6-FXYD2A0A087WZ82 144 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 K7EPK0 472 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 RLN2P04090 185 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 CNTFRP26992 372 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 NKX2-5P52952 324 aaPredicted RBP12.97□□□□□ -0.33
TRAF3-204ENST00000539721 BPIFB3P59826 476 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 UBE2KP61086 200 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 RELBQ01201 579 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 HNF4GQ14541 408 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 FAM71E2Q8N5Q1 922 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 VSTM2AQ8TAG5 236 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 EAF1Q96JC9 268 aaPredicted RBP12.97□□□□□ -0.33
TRAF3-204ENST00000539721 HYLS1Q96M11 299 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 MBD2Q9UBB5 411 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 NUP50Q9UKX7 468 aa12.97□□□□□ -0.33
TRAF3-204ENST00000539721 FLNAP21333 2647 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms